DK953588
Clone id TST39A01NGRL0018_C19
Library
Length 561
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_C19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTGTGTTGTCTTTCCTTTCACTATCACGATCCACTCAAAGATCTCCAACGCGCTCTGCTC
TTGCTCACCCAAGGGCGGTCGTATACACGAAACTCGCCATTCCTGTGTTTTTTAGGGTTA
GGGTAATTGATTTTCAGCATTTCGCTTGTCTCATGGGGGTTACAACATTTGGGCTCAGTT
ACGTGTTTGTCTTTCTGTTCGTCCTCTGCAACCGTTCAGCTGCCTCGTTTCTCTCGTCTG
ATGTCTGTCCAAAGCTTGACATTGAAGAAGTTCTCCTGCTCCAAGAGAATCAGTGTATCA
TTGATGGTGACGGCAACTCATTGTATGCCGATATTGCACCTGGGGTCGCAGAGGTGAATG
GAACTACACTTGAAAGAGTTTTAAGCATTCTGCAAAGCAAGCAGGATGCTTATGCTGCCA
TCCTCTTCTATGCAAAGCTGGTGTCCCTTCTCCAGGACCTTAAGGCCTCTGTTTGACACA
CTTTCATCAACGTTTCCAGGAAATTTACCATATAGCTGTCGAGGACTCAGCCATCCAACC
AAGTGGCTCTTTCTCAATATG
■■Homology search results ■■ -
sp_hit_id Q17688
Definition sp|Q17688|TXNDL_CAEEL Thioredoxin domain-containing protein C06A6.5 OS=Caenorhabditis elegans
Align length 19
Score (bit) 30.4
E-value 6.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953588|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_C19, 5'
(561 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q17688|TXNDL_CAEEL Thioredoxin domain-containing protein C06A... 30 6.3
sp|Q4P9K9|CHS8_USTMA Chitin synthase 8 OS=Ustilago maydis GN=CHS... 30 6.3
sp|Q9YKD6|RDRP_TOMS1 Replicase large subunit OS=Tomato mosaic vi... 30 8.2
sp|P03587|RDRP_TOML Replicase large subunit OS=Tomato mosaic vir... 30 8.2
sp|P89676|RDRP_TOMK2 Replicase large subunit OS=Tomato mosaic vi... 30 8.2
sp|Q9Q1T8|RDRP_TOMK1 Replicase large subunit OS=Tomato mosaic vi... 30 8.2
sp|Q98745|RDRP_TMVRA Replicase large subunit OS=Tobacco mosaic v... 30 8.2
sp|O93058|RDRP_TMVOM Replicase large subunit OS=Tobacco mosaic v... 30 8.2
sp|P30738|RDRP_TMVKR Replicase large subunit OS=Tobacco mosaic v... 30 8.2
sp|Q9YQ08|RDRP_TMVB Replicase large subunit OS=Tobacco mosaic vi... 30 8.2
sp|P03586|RDRP_TMV Replicase large subunit OS=Tobacco mosaic vir... 30 8.2

>sp|Q17688|TXNDL_CAEEL Thioredoxin domain-containing protein C06A6.5
OS=Caenorhabditis elegans GN=C06A6.5 PE=1 SV=2
Length = 413

Score = 30.4 bits (67), Expect = 6.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1

Query: 439 WCPFSRTLRPLFDTLSSTF 495
WCPFSR L+P+F+ + F
Sbjct: 53 WCPFSRRLKPIFEESARVF 71


>sp|Q4P9K9|CHS8_USTMA Chitin synthase 8 OS=Ustilago maydis GN=CHS8
PE=3 SV=1
Length = 2005

Score = 30.4 bits (67), Expect = 6.3
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1

Query: 172 GSVTCLSFCSSSATVQLPRFSRLMSVQSLTLKKFSCSKRISVSLMVTATHCMPILHLGSQ 351
GSVTCL C S ++ P R + + S ++ ++ ++ V H +LHLG
Sbjct: 1499 GSVTCLPGCFSMFRIRTPDTHRPLFIASQIVEDYAENR-------VDTLHTKNLLHLGED 1551

Query: 352 R*M-ELHLKEF 381
R + L LK F
Sbjct: 1552 RYLTTLVLKHF 1562


>sp|Q9YKD6|RDRP_TOMS1 Replicase large subunit OS=Tomato mosaic virus
(strain S-1) PE=3 SV=1
Length = 1616

Score = 30.0 bits (66), Expect = 8.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1

Query: 367 HLKEF*AFCKASRMLMLPSSSMQSWCPFSR--TLRPLFD 477
H K+ A C + R+L+ SSS+ W P R + PLFD
Sbjct: 341 HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFD 379


>sp|P03587|RDRP_TOML Replicase large subunit OS=Tomato mosaic virus
(strain L) PE=1 SV=2
Length = 1616

Score = 30.0 bits (66), Expect = 8.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1

Query: 367 HLKEF*AFCKASRMLMLPSSSMQSWCPFSR--TLRPLFD 477
H K+ A C + R+L+ SSS+ W P R + PLFD
Sbjct: 341 HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFD 379


>sp|P89676|RDRP_TOMK2 Replicase large subunit OS=Tomato mosaic virus
(strain Kazakh K2) PE=3 SV=1
Length = 1616

Score = 30.0 bits (66), Expect = 8.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1

Query: 367 HLKEF*AFCKASRMLMLPSSSMQSWCPFSR--TLRPLFD 477
H K+ A C + R+L+ SSS+ W P R + PLFD
Sbjct: 341 HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFD 379


>sp|Q9Q1T8|RDRP_TOMK1 Replicase large subunit OS=Tomato mosaic virus
(strain Kazakh K1) PE=3 SV=2
Length = 1616

Score = 30.0 bits (66), Expect = 8.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1

Query: 367 HLKEF*AFCKASRMLMLPSSSMQSWCPFSR--TLRPLFD 477
H K+ A C + R+L+ SSS+ W P R + PLFD
Sbjct: 341 HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFD 379


>sp|Q98745|RDRP_TMVRA Replicase large subunit OS=Tobacco mosaic
virus (strain Rakkyo) PE=3 SV=1
Length = 1616

Score = 30.0 bits (66), Expect = 8.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1

Query: 367 HLKEF*AFCKASRMLMLPSSSMQSWCPFSR--TLRPLFD 477
H K+ A C + R+L+ SSS+ W P R + PLFD
Sbjct: 341 HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIIPLFD 379


>sp|O93058|RDRP_TMVOM Replicase large subunit OS=Tobacco mosaic
virus (strain OM) PE=3 SV=1
Length = 1616

Score = 30.0 bits (66), Expect = 8.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1

Query: 367 HLKEF*AFCKASRMLMLPSSSMQSWCPFSR--TLRPLFD 477
H K+ A C + R+L+ SSS+ W P R + PLFD
Sbjct: 341 HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFD 379


>sp|P30738|RDRP_TMVKR Replicase large subunit OS=Tobacco mosaic
virus (strain Korean NC 82) PE=3 SV=2
Length = 1616

Score = 30.0 bits (66), Expect = 8.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1

Query: 367 HLKEF*AFCKASRMLMLPSSSMQSWCPFSR--TLRPLFD 477
H K+ A C + R+L+ SSS+ W P R + PLFD
Sbjct: 341 HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFD 379


>sp|Q9YQ08|RDRP_TMVB Replicase large subunit OS=Tobacco mosaic virus
(strain B935A) PE=3 SV=1
Length = 1616

Score = 30.0 bits (66), Expect = 8.2
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1

Query: 367 HLKEF*AFCKASRMLMLPSSSMQSWCPFSR--TLRPLFD 477
H K+ A C + R+L+ SSS+ W P R + PLFD
Sbjct: 341 HYKKTLAMCNSERILLEDSSSVNYWFPKMRDMVIVPLFD 379


tr_hit_id A9NUT7
Definition tr|A9NUT7|A9NUT7_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 21
Score (bit) 37.4
E-value 7.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953588|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_C19, 5'
(561 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NUT7|A9NUT7_PICSI Putative uncharacterized protein OS=Picea... 37 7e-06
tr|A7PW43|A7PW43_VITVI Chromosome chr8 scaffold_34, whole genome... 36 0.001
tr|Q5DJV7|Q5DJV7_ORYSJ Adenosine 5'-phosphosulfate reductase-lik... 32 0.007
tr|A9S8B2|A9S8B2_PHYPA Predicted protein (Fragment) OS=Physcomit... 38 0.007
tr|Q5EUC5|Q5EUC5_MAIZE Adenosine 5'-phosphosulfate reductase 5 (... 32 0.042
tr|B4FGU2|B4FGU2_MAIZE Putative uncharacterized protein OS=Zea m... 32 0.045
tr|Q9SRW3|Q9SRW3_ARATH F20H23.9 protein OS=Arabidopsis thaliana ... 40 0.088
tr|Q93YX4|Q93YX4_ARATH Putative uncharacterized protein At3g0386... 40 0.088
tr|Q2QP53|Q2QP53_ORYSJ Adenosine 5'-phosphosulfate reductase 6, ... 40 0.11
tr|B8BMC3|B8BMC3_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.11
tr|Q5EUC4|Q5EUC4_MAIZE Adenosine 5'-phosphosulfate reductase 6 (... 39 0.15
tr|B6TB09|B6TB09_MAIZE APRL6-Zea mays adenosine 5'-phosphosulfat... 39 0.15
tr|Q5EUC6|Q5EUC6_MAIZE Adenosine 5'-phosphosulfate reductase 4 O... 35 0.15
tr|A7NUY1|A7NUY1_VITVI Chromosome chr18 scaffold_1, whole genome... 35 0.42
tr|Q9SA00|Q9SA00_ARATH F21H2.1 protein (Putative uncharacterized... 36 0.42
tr|Q5EUC1|Q5EUC1_MAIZE APRL5-Zea mays adenosine 5'-phosphosulfat... 35 0.42
tr|Q6Z567|Q6Z567_ORYSJ Disulfide isomerase-like protein OS=Oryza... 32 0.42
tr|B8BAR9|B8BAR9_ORYSI Putative uncharacterized protein OS=Oryza... 32 0.42
tr|B6TY43|B6TY43_MAIZE APRL3-Zea mays adenosine 5'-phosphosulfat... 33 0.69
tr|Q5EUC7|Q5EUC7_MAIZE Adenosine 5'-phosphosulfate reductase 3 (... 33 0.69
tr|Q84P95|Q84P95_ORYSJ Os02g0754900 protein OS=Oryza sativa subs... 33 1.2
tr|A2X9R3|A2X9R3_ORYSI Putative uncharacterized protein OS=Oryza... 33 1.2
tr|Q5EUC2|Q5EUC2_MAIZE Adenosine 5'-phosphosulfate reductase 8 O... 36 1.3
tr|B6TNM3|B6TNM3_MAIZE APRL5-Zea mays adenosine 5'-phosphosulfat... 36 1.3
tr|B4G1W2|B4G1W2_MAIZE Putative uncharacterized protein OS=Zea m... 35 1.3
tr|B4FL05|B4FL05_MAIZE Putative uncharacterized protein OS=Zea m... 33 2.0
tr|A3HT12|A3HT12_9SPHI Non-ribosomal peptide synthase OS=Algorip... 35 2.1
tr|Q5EUC3|Q5EUC3_MAIZE Adenosine 5'-phosphosulfate reductase 7 O... 35 2.2
tr|B6UE94|B6UE94_MAIZE APRL6-Zea mays adenosine 5'-phosphosulfat... 35 2.2
tr|B4FJZ8|B4FJZ8_MAIZE Putative uncharacterized protein OS=Zea m... 35 2.2

>tr|A9NUT7|A9NUT7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 317

Score = 37.4 bits (85), Expect(3) = 7e-06
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +1

Query: 436 SWCPFSRTLRPLFDTLSSTFP 498
SWCPFS+ RP+F+ LSS FP
Sbjct: 88 SWCPFSKQCRPVFNVLSSMFP 108



Score = 31.2 bits (69), Expect(3) = 7e-06
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3

Query: 246 CPKLDIEEVLLLQENQCII---DGDGNSLYADIAPGVAEVNGTTLERVLSILQSKQDAYA 416
CP ++++ N+C+ D + + V E++ +LE ILQ + Y
Sbjct: 25 CPIPNLQDTF---SNKCMAFDSDSPSHGAAGFLPDRVRELDAVSLEAAFDILQRSSNTYI 81

Query: 417 AILFYA 434
A+LFYA
Sbjct: 82 AVLFYA 87



Score = 23.9 bits (50), Expect(3) = 7e-06
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2

Query: 494 FQEIYHIAVEDSAIQP 541
F I+H+AVE+SA +P
Sbjct: 107 FPTIHHVAVEESASKP 122


>tr|A7PW43|A7PW43_VITVI Chromosome chr8 scaffold_34, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00025467001
PE=4 SV=1
Length = 292

Score = 35.8 bits (81), Expect(2) = 0.001
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +1

Query: 436 SWCPFSRTLRPLFDTLSSTFP 498
SWCPFS +RP F+ LSS FP
Sbjct: 80 SWCPFSCKMRPKFEVLSSMFP 100



Score = 30.0 bits (66), Expect(2) = 0.001
Identities = 22/82 (26%), Positives = 42/82 (51%)
Frame = +3

Query: 189 VFLFVLCNRSAASFLSSDVCPKLDIEEVLLLQENQCIIDGDGNSLYADIAPGVAEVNGTT 368
+FL++ S LSS VCP L + ++ ++QC + ++L +V+G
Sbjct: 9 LFLYIGAVSSLPGTLSSSVCP-LQSDFLVAFLQSQCPLSLSSHAL--------LDVDGNF 59

Query: 369 LERVLSILQSKQDAYAAILFYA 434
L+R L+ Q + + ++LF+A
Sbjct: 60 LDRALTSKQG--NGFTSVLFHA 79


>tr|Q5DJV7|Q5DJV7_ORYSJ Adenosine 5'-phosphosulfate reductase-like
OS=Oryza sativa subsp. japonica GN=APRL4 PE=2 SV=1
Length = 264

Score = 31.6 bits (70), Expect(2) = 0.007
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +3

Query: 216 SAASFLSSDVCPKLDIEEVLLLQENQCIIDGDGNSLYADIAPGVAEVNGTTLERVLSILQ 395
+AA+ VCP+ +L +++ C G + GV E + L++ ++++
Sbjct: 24 AAAATAGHGVCPRQPAAAAVLPRQSSCPAAGSPGHRAHHV--GVVEGDDFVLQKAVTLVL 81

Query: 396 SKQDAYAAILFYA 434
++ + AILFYA
Sbjct: 82 QNREDFVAILFYA 94



Score = 31.6 bits (70), Expect(2) = 0.007
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1

Query: 436 SWCPFSRTLRPLFDTLSSTFP 498
SWCPFS+ R F LSS FP
Sbjct: 95 SWCPFSKIFRTDFQKLSSFFP 115


>tr|A9S8B2|A9S8B2_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_46378 PE=4 SV=1
Length = 175

Score = 37.7 bits (86), Expect(2) = 0.007
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +1

Query: 436 SWCPFSRTLRPLFDTLSSTFP 498
+WCPFSR +RP++D LS+ FP
Sbjct: 31 TWCPFSRQVRPVYDVLSTIFP 51



Score = 25.4 bits (54), Expect(2) = 0.007
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = +2

Query: 494 FQEIYHIAVEDSAIQPS 544
F ++H+A+E+S+++PS
Sbjct: 50 FPTVHHVAIEESSVRPS 66


>tr|Q5EUC5|Q5EUC5_MAIZE Adenosine 5'-phosphosulfate reductase 5
(Putative uncharacterized protein) OS=Zea mays GN=APRL5
PE=2 SV=1
Length = 267

Score = 31.6 bits (70), Expect(2) = 0.042
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1

Query: 436 SWCPFSRTLRPLFDTLSSTFP 498
SWCPFS+ R F LSS FP
Sbjct: 98 SWCPFSKIFRTDFQKLSSFFP 118



Score = 28.9 bits (63), Expect(2) = 0.042
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3

Query: 243 VCPKLDIEEVLLLQENQC-IIDGDGNSLYADIAPGVAEVNGTTLERVLSILQSKQDAYAA 419
VC + + V+L Q + C +D G L A V +G + V +LQ+++D + A
Sbjct: 36 VCQRPPVAAVILQQASTCRAVDAPG--LRGHRAGFVEGDDGALQKAVALVLQNRED-FVA 92

Query: 420 ILFYA 434
ILFYA
Sbjct: 93 ILFYA 97


>tr|B4FGU2|B4FGU2_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 149

Score = 31.6 bits (70), Expect(2) = 0.045
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1

Query: 436 SWCPFSRTLRPLFDTLSSTFP 498
SWCPFS+ R F LSS FP
Sbjct: 98 SWCPFSKIFRTDFQKLSSFFP 118



Score = 28.9 bits (63), Expect(2) = 0.045
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3

Query: 243 VCPKLDIEEVLLLQENQC-IIDGDGNSLYADIAPGVAEVNGTTLERVLSILQSKQDAYAA 419
VC + + V+L Q + C +D G L A V +G + V +LQ+++D + A
Sbjct: 36 VCQRPPVAAVILQQASTCRAVDAPG--LRGHRAGFVEGDDGALQKAVALVLQNRED-FVA 92

Query: 420 ILFYA 434
ILFYA
Sbjct: 93 ILFYA 97


>tr|Q9SRW3|Q9SRW3_ARATH F20H23.9 protein OS=Arabidopsis thaliana
GN=F20H23.9 PE=4 SV=1
Length = 318

Score = 40.0 bits (92), Expect = 0.088
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1

Query: 436 SWCPFSRTLRPLFDTLSSTFP 498
SWCPFSR +RP FD LSS FP
Sbjct: 84 SWCPFSRAVRPKFDMLSSMFP 104


>tr|Q93YX4|Q93YX4_ARATH Putative uncharacterized protein At3g03860
OS=Arabidopsis thaliana GN=At3g03860 PE=2 SV=1
Length = 300

Score = 40.0 bits (92), Expect = 0.088
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1

Query: 436 SWCPFSRTLRPLFDTLSSTFP 498
SWCPFSR +RP FD LSS FP
Sbjct: 84 SWCPFSRAVRPKFDMLSSMFP 104


>tr|Q2QP53|Q2QP53_ORYSJ Adenosine 5'-phosphosulfate reductase 6,
putative, expressed OS=Oryza sativa subsp. japonica
GN=LOC_Os12g35640 PE=4 SV=1
Length = 300

Score = 39.7 bits (91), Expect = 0.11
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1

Query: 436 SWCPFSRTLRPLFDTLSSTFP 498
SWCPFS+ +RP+FD LSS FP
Sbjct: 88 SWCPFSQRMRPVFDDLSSMFP 108


>tr|B8BMC3|B8BMC3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_38622 PE=4 SV=1
Length = 218

Score = 39.7 bits (91), Expect = 0.11
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +1

Query: 436 SWCPFSRTLRPLFDTLSSTFP 498
SWCPFS+ +RP+FD LSS FP
Sbjct: 89 SWCPFSQRMRPVFDDLSSMFP 109