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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953590
Clone id TST39A01NGRL0018_C22
Library
Length 480
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_C22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGCTTTATTTCACCCCTTGACAAACTATATGATGCTAAGGTTGGATGACTTAAGTCCCAA
GCTGGGCATATCGAGGGAAGTATGTTGCTTATGTACTGGCGTCCTTTTTCCACCGCGAAT
CTACCAGCTTATTATTTCTGCCTGAGAGGACATAAGGGCTAGTGAATTGCTCTTGTTGTT
GGTTTTTTCCATGTGTCTTCATGCCAATCAGTGACTGAGATGGTGTCTTAGAAACTGTGG
ATGACACACATGAAGGTTTTTGAGCTGGGAGGTGGGCATCAGTCTATGCCTTGCATATAT
TCAAGTATTGTTTGGCATGAGGTGGAGGAAGCAACCCAATCATTGTTCATTATGCTTGTG
GGAACCCAATCAAATGATATTTGTGGCCCGATTATTTTTCATTAGCTATTTTTTACAATA
GCAACTTTAGTTTGTTGCACATGAAGTACCATATGAGCCTGTTACATGGAGTATCCTCAC
■■Homology search results ■■ -
sp_hit_id Q98325
Definition sp|Q98325|CFLA_MCV1 Viral CASP8 and FADD-like apoptosis regulator OS=Molluscum contagiosum virus subtype 1
Align length 59
Score (bit) 32.0
E-value 1.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953590|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_C22, 5'
         (480 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q98325|CFLA_MCV1 Viral CASP8 and FADD-like apoptosis regulato...    32   1.5  
sp|Q5ZK74|ASHWN_CHICK Ashwin OS=Gallus gallus GN=RCJMB04_12m8 PE...    31   3.3  
sp|Q05319|STUB_DROME Serine proteinase stubble OS=Drosophila mel...    30   5.6  
sp|O60999|CUL1_DICDI Cullin-1 OS=Dictyostelium discoideum GN=cul...    30   7.4  
sp|Q9GMS5|IMPG1_BOVIN Interphotoreceptor matrix proteoglycan 1 O...    29   9.6  

>sp|Q98325|CFLA_MCV1 Viral CASP8 and FADD-like apoptosis regulator
           OS=Molluscum contagiosum virus subtype 1 GN=MC159L PE=1
           SV=1
          Length = 241

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 18/59 (30%), Positives = 33/59 (55%)
 Frame = +2

Query: 26  YMMLRLDDLSPKLGISREVCCLCTGVLFPPRIYQLIISA*EDIRASELLLLLVFSMCLH 202
           Y++ R+D L  + G+S+E      G  F  R  +L++   E++ +SEL  L +F+  L+
Sbjct: 65  YVLQRMDLLKSRFGLSKEGAEQLLGTSFLTRYRKLMVCVGEELDSSELRALRLFACNLN 123


>sp|Q5ZK74|ASHWN_CHICK Ashwin OS=Gallus gallus GN=RCJMB04_12m8 PE=2
           SV=1
          Length = 241

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -3

Query: 346 TMIGLLPPPHAKQYLNICKA*TDAHLPAQKPSCVSSTVSKTPSQSLIGMKTH 191
           T+  L  P +A  Y++      DA L  +      + +SKT S  L+ +KTH
Sbjct: 147 TVRRLSAPSNASTYISASSLSEDAKLEVRNNEAKQNNISKTNSSVLVNLKTH 198


>sp|Q05319|STUB_DROME Serine proteinase stubble OS=Drosophila
           melanogaster GN=Sb PE=2 SV=2
          Length = 787

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = -3

Query: 337 GLLPPPHAKQYLNICKA*TDAHLPAQKPSCVSSTVSKTPSQSLIGMKTHGKNQQQEQ 167
           G L  PH   Y +     +D H  A  PS  SS+ S +   S+    T  + QQQ Q
Sbjct: 239 GTLARPHPPPYQSKPTTASDLHGSASHPSSSSSSSSSSNPNSIWHTSTQQQQQQQHQ 295


>sp|O60999|CUL1_DICDI Cullin-1 OS=Dictyostelium discoideum GN=culA
           PE=1 SV=1
          Length = 770

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +3

Query: 219 DGVLETVDDTHEGF*AGRWASVYALHIFKYCLA 317
           +G+ + + D ++GF   +W ++Y  H++ YC A
Sbjct: 24  EGIYKIITDLNKGFPKQKWIALYT-HVYDYCAA 55


>sp|Q9GMS5|IMPG1_BOVIN Interphotoreceptor matrix proteoglycan 1
           OS=Bos taurus GN=IMPG1 PE=2 SV=1
          Length = 794

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = -2

Query: 386 PQISFDWVPTSIMNNDWVASSTSCQTILEYMQGID*CPPPSS 261
           P+IS   +PTS  + DW+  STS Q  +EY+ G+D    P+S
Sbjct: 502 PEISH--LPTS--SEDWL--STSSQDTMEYLDGVDLTKTPTS 537
tr_hit_id Q7TS58
Definition tr|Q7TS58|Q7TS58_MOUSE Antigen presenting cell lectin-like receptor A2 OS=Mus musculus
Align length 81
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953590|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_C22, 5'
         (480 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7TS58|Q7TS58_MOUSE Antigen presenting cell lectin-like recep...    35   1.4  
tr|A9P9D3|A9P9D3_POPTR Putative uncharacterized protein OS=Popul...    33   9.2  
tr|A8N0W6|A8N0W6_COPC7 Putative uncharacterized protein OS=Copri...    33   9.2  
tr|Q9HLG7|Q9HLG7_THEAC Putative uncharacterized protein Ta0261 O...    33   9.2  

>tr|Q7TS58|Q7TS58_MOUSE Antigen presenting cell lectin-like receptor
           A2 OS=Mus musculus GN=Clec4b1 PE=2 SV=1
          Length = 209

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
 Frame = +1

Query: 187 FHVSSCQSVTEMVS*KLWMTHMKVFELGGGH-QSMPCIYSSIVWHEVEEATQSLFIMLVG 363
           +H  +C S   MVS K+W    K ++L G H   +P ++SS  W++ EE    +   LV 
Sbjct: 58  YHSLTCFSEGNMVSDKVWSCCPKDWKLFGSHCYLVPTVFSSASWNKSEENCSRMGAHLVV 117

Query: 364 TQSND----ICGPIIFH*LFF 414
             S +    I G +  H  +F
Sbjct: 118 IHSQEEQDFITGILDIHAAYF 138


>tr|A9P9D3|A9P9D3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 93

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = -3

Query: 343 MIGLLPPPHAKQYLNICKA*TDAHLPAQKPSCVSSTVSKTPSQSLIGMKTHGKNQQQEQF 164
           ++ LL   HAK     C        PAQ  SCVS+  S TP  +L   K     ++Q+  
Sbjct: 12  LVLLLAKEHAKVDAVTCS-------PAQLSSCVSAITSSTPPTNLCCSKI----KEQKPC 60

Query: 163 TSPYVLSGRNNKLVDS-RWKKDAST*ATYFPR 71
              Y+ + +  K +++   +K AST  T FP+
Sbjct: 61  LCQYLKNPKLQKFINTPNARKVASTCGTPFPK 92


>tr|A8N0W6|A8N0W6_COPC7 Putative uncharacterized protein
           OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
           9003) GN=CC1G_13193 PE=4 SV=1
          Length = 686

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -3

Query: 328 PPPHAKQYLNICKA*TDAH--LPAQKPSCVSSTVSKTPSQSLIGMKTHGKNQQQEQF 164
           PPP  +   N+ +  T +H  +PAQ P    S     PSQ     + H  +QQQ+Q+
Sbjct: 588 PPPPQQHSPNLARHNTVSHRSVPAQNPQLARSNTISAPSQP--AQRYHHHHQQQQQY 642


>tr|Q9HLG7|Q9HLG7_THEAC Putative uncharacterized protein Ta0261
           OS=Thermoplasma acidophilum GN=Ta0261 PE=4 SV=1
          Length = 748

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = +3

Query: 327 GSNPIIVHYACGNPIK*YLWPD---YFSLAIFYNSNFSLLHMKYHMSLLHG 470
           G+NP + + +  N    YL+P    YF +A++Y +N+S L+  ++ +  +G
Sbjct: 610 GANPAVFYISMNN----YLYPTNNTYFRMALWYGTNYSALNTPFYYTFANG 656