DK953591 |
Clone id |
TST39A01NGRL0018_C23 |
Library |
TST39 |
Length |
649 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_C23. 5' end sequence. |
Accession |
DK953591 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL20Contig1 |
Sequence |
GCTGCAGCCTGCGGAGAGTGTTAGCCCCAAGCTTCCATGGCTTCCTCCGTTGCCTCCCCC GCTGTTGCATCGCTTCAAGCTGTCCAGGGCTTAGGACCGTCCCCTTGCACTGGGCAGGCA GTGCCTGCGTCGGCATTCCTTGGAGCTGGATTGAAGAAGTCCAACATCTCCATCACACCG GCAACTAGCTCTGCAAAGCCATTGGTGGTGCACGCTTCGGAGGATGAGTCGAAGCAGACC AAGAAGGATAAATGGGCAGGACTTGCATACGACACTTCCGATGATCAGCAAGACATTACA AGAGGGAAAGGGATGGTGGATGCCCTCTTCCAAGGGGCAGTTGGCTTGGGTACCCAGCAT GCTGTCATGAGTTCCTACGAGTACATCAGCACTGGTCAGAGGACTTTCCAGATGGACAAC ATGAAGGATGGGTACTACATCGCACCGGCTTTCATGGACAAGTTGGTGGTGCACATTGCC AAGAACTTTATGAACCTTCCCAATATTAAGATTCCTTTGATTCTTGGTATTTGGGGTGGA AAAGGACAAGGAAAATCTTTCCAGTGTGAAACTAGTGTTCTCAAAGCTTGGAATCAACCC CATCATGATGAGTGCTGGTGAGCTCGAGAGTGGAAATGCTGGTGAACCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40281 |
Definition |
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica |
Align length |
151 |
Score (bit) |
217.0 |
E-value |
4.0e-64 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953591|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_C23, 5' (649 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ... 217 4e-64 sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 197 2e-59 sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ... 194 2e-58 sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 194 2e-58 sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ... 193 1e-57 sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ... 207 3e-53 sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase... 206 7e-53 sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase... 206 7e-53 sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ... 205 1e-52 sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ... 200 5e-51 sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ... 200 6e-51 sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ... 195 2e-49 sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase... 191 3e-48 sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ... 188 2e-47 sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase... 187 3e-47 sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ... 144 1e-41 sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ... 72 2e-20 sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ... 79 2e-14 sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ... 78 4e-14 sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ... 47 9e-05 sp|Q9JJG0|TACC2_MOUSE Transforming acidic coiled-coil-containing... 33 1.3 sp|P00789|CANX_CHICK Calpain-1 catalytic subunit OS=Gallus gallu... 32 2.2 sp|P42375|CH60_PORGI 60 kDa chaperonin OS=Porphyromonas gingival... 32 2.2 sp|O95359|TACC2_HUMAN Transforming acidic coiled-coil-containing... 32 3.8 sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus... 32 3.8 sp|P00521|ABL_MLVAB Tyrosine-protein kinase transforming protein... 31 4.9 sp|P00520|ABL1_MOUSE Proto-oncogene tyrosine-protein kinase ABL1... 31 4.9 sp|Q60HG2|TOR1A_MACFA Torsin-1A OS=Macaca fascicularis GN=TOR1A ... 31 4.9 sp|P11964|SODCP_PEA Superoxide dismutase [Cu-Zn], chloroplastic ... 31 4.9 sp|Q9Z8F8|AMPA_CHLPN Probable cytosol aminopeptidase OS=Chlamydi... 31 4.9
>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1 Length = 437
Score = 217 bits (553), Expect(2) = 4e-64 Identities = 106/151 (70%), Positives = 119/151 (78%) Frame = +1
Query: 118 AVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQDI 297 +VP+S FLG+ LKK N T + S+ L + AS DE KQT KD+W GLA+DTSDDQQDI Sbjct: 26 SVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDI 85
Query: 298 TRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVHI 477 TRGKG VD+LFQ G GT A+MSSYEYISTG R + DN DGYYIAPAFMDKLVVHI Sbjct: 86 TRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHI 145
Query: 478 AKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 KNFM LPN+K+PLILGIWGGKGQGKSFQCE Sbjct: 146 TKNFMTLPNMKVPLILGIWGGKGQGKSFQCE 176
Score = 48.1 bits (113), Expect(2) = 4e-64 Identities = 22/27 (81%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF+K+ I+PIMMSAGELESGNAGEP Sbjct: 176 ELVFAKMRISPIMMSAGELESGNAGEP 202
>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 442
Score = 197 bits (502), Expect(2) = 2e-59 Identities = 97/157 (61%), Positives = 114/157 (72%), Gaps = 4/157 (2%) Frame = +1
Query: 112 GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTS 279 G +VP++AF G LKK +S T+ + +V + D KQT D+W GL D S Sbjct: 24 GTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFS 83
Query: 280 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 459 DDQQDITRGKGMVD+LFQ G GT HAV+ SYEY+S G R + +DN DG+YIAPAFMD Sbjct: 84 DDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMD 143
Query: 460 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 KLVVHI KNF+ LPNIK+PLILGIWGGKGQGKSFQCE Sbjct: 144 KLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCE 180
Score = 52.4 bits (124), Expect(2) = 2e-59 Identities = 24/27 (88%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF K+GINPIMMSAGELESGNAGEP Sbjct: 180 ELVFRKMGINPIMMSAGELESGNAGEP 206
>sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1 Length = 459
Score = 194 bits (492), Expect(2) = 2e-58 Identities = 96/156 (61%), Positives = 117/156 (75%), Gaps = 3/156 (1%) Frame = +1
Query: 112 GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSD 282 G +VP++AF G LKK +S +P S+ VV DE TK+D+W GL +TSD Sbjct: 24 GTSVPSTAFFGKSLKKVYAKGVS-SPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSD 79
Query: 283 DQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDK 462 DQQDI RGKG+VD+LFQ G GT HA+M+SYEY+S +T+Q+DN DG+YIAPAFMDK Sbjct: 80 DQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDK 139
Query: 463 LVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 LVVHI KNF+ LPNIK+PLILG+WGGKGQGKSFQCE Sbjct: 140 LVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCE 175
Score = 52.4 bits (124), Expect(2) = 2e-58 Identities = 24/27 (88%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF K+GINPIMMSAGELESGNAGEP Sbjct: 175 ELVFRKMGINPIMMSAGELESGNAGEP 201
>sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1 Length = 439
Score = 194 bits (492), Expect(2) = 2e-58 Identities = 94/157 (59%), Positives = 112/157 (71%), Gaps = 4/157 (2%) Frame = +1
Query: 112 GQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTS 279 G +VP++AF G LKK +S T+ + + + D KQT D+W GL D S Sbjct: 24 GTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFS 83
Query: 280 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 459 DDQQDI RGKGMVD+LFQ G GT HAV+ SYEY+S G R + MDN DG+YIAP+FMD Sbjct: 84 DDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMD 143
Query: 460 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 KLVVHI KNF+ LPNIK+PLILG+WGGKGQGKSFQCE Sbjct: 144 KLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCE 180
Score = 52.4 bits (124), Expect(2) = 2e-58 Identities = 24/27 (88%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF K+GINPIMMSAGELESGNAGEP Sbjct: 180 ELVFRKMGINPIMMSAGELESGNAGEP 206
>sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3 Length = 433
Score = 193 bits (490), Expect(2) = 1e-57 Identities = 96/154 (62%), Positives = 118/154 (76%), Gaps = 7/154 (4%) Frame = +1
Query: 130 SAFLGAGLKKSNISIT------PATSSAKPLVVHASE-DESKQTKKDKWAGLAYDTSDDQ 288 S+FLG L K +S ++S+++ + A E DE+KQT +D+W GLAYD SDDQ Sbjct: 19 SSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQ 78
Query: 289 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 468 QDITRGKG+VD LFQ +G GT AV+SSY+YIS GQ+++ DNM DG+YIA FMDKLV Sbjct: 79 QDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLV 138
Query: 469 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 VH++KNFM LPNIK+PLILGIWGGKGQGKSFQCE Sbjct: 139 VHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCE 172
Score = 50.8 bits (120), Expect(2) = 1e-57 Identities = 23/27 (85%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF+K+GI PIMMSAGELESGNAGEP Sbjct: 172 ELVFAKMGITPIMMSAGELESGNAGEP 198
>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2 Length = 439
Score = 207 bits (528), Expect = 3e-53 Identities = 106/167 (63%), Positives = 120/167 (71%), Gaps = 4/167 (2%) Frame = +1
Query: 112 GQAVPASAFLGAGLKKSNISITP----ATSSAKPLVVHASEDESKQTKKDKWAGLAYDTS 279 G + P SAF G LKK+ S P S K + +ES+QT KD+W GLAYD S Sbjct: 24 GASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDIS 83
Query: 280 DDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMD 459 DDQQDITRGKGMVD LFQ + GT +AVMSSYEY+STG R Q+DN+KDG+YIAPAF+D Sbjct: 84 DDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLD 141
Query: 460 KLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCETSVLKAWNQP 600 KLVVHI KNFM LPNIK+PLILGIWGGKGQGKSFQCE K P Sbjct: 142 KLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINP 188
Score = 53.1 bits (126), Expect = 1e-06 Identities = 24/27 (88%), Positives = 27/27 (100%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF+K+GINPIMMSAGELESGNAGEP Sbjct: 178 ELVFAKMGINPIMMSAGELESGNAGEP 204
>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1 Length = 435
Score = 206 bits (525), Expect = 7e-53 Identities = 106/170 (62%), Positives = 119/170 (70%) Frame = +1
Query: 91 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 270 L S VP++AF G+ LKKS P SS +V E +QT KDKW GLAY Sbjct: 18 LNGSGARASLVPSTAFFGSSLKKSAAKF-PKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76
Query: 271 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 450 D SDDQQDITRGKGMVD LFQ + GT +AVMSSY+YIS G R + +DN DG+YIAPA Sbjct: 77 DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136
Query: 451 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCETSVLKAWNQP 600 FMDKLVVHI KNF++LPNIKIPLILGIWGGKGQGKSFQCE K P Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 186
Score = 53.1 bits (126), Expect = 1e-06 Identities = 24/27 (88%), Positives = 27/27 (100%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF+K+GINPIMMSAGELESGNAGEP Sbjct: 176 ELVFAKMGINPIMMSAGELESGNAGEP 202
>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1 Length = 476
Score = 206 bits (525), Expect = 7e-53 Identities = 106/170 (62%), Positives = 119/170 (70%) Frame = +1
Query: 91 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 270 L S VP++AF G+ LKKS P SS +V E +QT KDKW GLAY Sbjct: 18 LNGSGARASLVPSTAFFGSSLKKSAAKF-PKASSGNFKIVAQEISEDQQTDKDKWKGLAY 76
Query: 271 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 450 D SDDQQDITRGKGMVD LFQ + GT +AVMSSY+YIS G R + +DN DG+YIAPA Sbjct: 77 DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136
Query: 451 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCETSVLKAWNQP 600 FMDKLVVHI KNF++LPNIKIPLILGIWGGKGQGKSFQCE K P Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINP 186
Score = 53.1 bits (126), Expect = 1e-06 Identities = 24/27 (88%), Positives = 27/27 (100%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF+K+GINPIMMSAGELESGNAGEP Sbjct: 176 ELVFAKMGINPIMMSAGELESGNAGEP 202
>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1 Length = 413
Score = 205 bits (522), Expect = 1e-52 Identities = 103/163 (63%), Positives = 119/163 (73%) Frame = +1
Query: 112 GQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQ 291 G VP SAFLG+ LK S+ T + +V A +DE KQT+KDKW GLA+DTSDDQQ Sbjct: 22 GGLVPNSAFLGSRLKVSSRFTTSKMVTGNFKIV-AEQDEEKQTEKDKWRGLAFDTSDDQQ 80
Query: 292 DITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVV 471 DITRGKG+ D LFQ +G GT +AV+SSYEYIS G R + DN DG+YIAPAFMDKL V Sbjct: 81 DITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTV 140
Query: 472 HIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCETSVLKAWNQP 600 HI KNF+ LPNIK+PLILG+WGGKGQGKSFQCE K P Sbjct: 141 HIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINP 183
Score = 53.1 bits (126), Expect = 1e-06 Identities = 24/27 (88%), Positives = 27/27 (100%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF+K+GINPIMMSAGELESGNAGEP Sbjct: 173 ELVFAKMGINPIMMSAGELESGNAGEP 199
>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2 Length = 474
Score = 200 bits (509), Expect = 5e-51 Identities = 101/162 (62%), Positives = 119/162 (73%), Gaps = 1/162 (0%) Frame = +1
Query: 118 AVPASAFLGAGLKK-SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQD 294 + PAS FLG + S + + S+ V+ ED KQT D+W GLAYDTSDDQQD Sbjct: 27 SAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLAVKED--KQTDGDRWRGLAYDTSDDQQD 84
Query: 295 ITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVVH 474 ITRGKGMVD++FQ +G GT HAV+SSYEY+S G R + +DNM DG+YIAPAFMDKLVVH Sbjct: 85 ITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVH 144
Query: 475 IAKNFMNLPNIKIPLILGIWGGKGQGKSFQCETSVLKAWNQP 600 I KNF+ LPNIK+PLILGIWGGKGQGKSFQCE + K P Sbjct: 145 ITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINP 186
Score = 50.8 bits (120), Expect = 6e-06 Identities = 23/27 (85%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LV +K+GINPIMMSAGELESGNAGEP Sbjct: 176 ELVMAKMGINPIMMSAGELESGNAGEP 202
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PIQ8 |
Definition |
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
153 |
Score (bit) |
218.0 |
E-value |
4.0e-65 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953591|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_C23, 5' (649 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom... 218 4e-65 tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ... 215 2e-64 tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis... 215 2e-64 tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car... 213 2e-62 tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car... 213 2e-62 tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos t... 209 1e-61 tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car... 208 3e-61 tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car... 208 3e-61 tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ... 200 4e-59 tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc... 199 5e-59 tr|A8W9B0|A8W9B0_FLABI Chloroplast ribulose 1,5-bisphosphate car... 201 6e-59 tr|B6T416|B6T416_MAIZE Ribulose bisphosphate carboxylase/oxygena... 193 1e-56 tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome... 219 1e-55 tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=... 213 6e-54 tr|Q9ATB9|Q9ATB9_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 212 2e-53 tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea... 211 3e-53 tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea... 211 3e-53 tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea... 211 3e-53 tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten... 209 9e-53 tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul... 209 9e-53 tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten... 209 2e-52 tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul... 208 3e-52 tr|A9RES5|A9RES5_PHYPA Predicted protein OS=Physcomitrella paten... 207 3e-52 tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul... 207 3e-52 tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul... 202 1e-50 tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 202 1e-50 tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten... 201 2e-50 tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 200 5e-50 tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 200 5e-50 tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar... 200 5e-50
>tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018440001 PE=4 SV=1 Length = 438
Score = 218 bits (555), Expect(2) = 4e-65 Identities = 106/153 (69%), Positives = 121/153 (79%) Frame = +1
Query: 112 GQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQQ 291 G +VP+SAFLG+ LKK N T + S+ V A D+ QT+KDKW GLA+DTSDDQQ Sbjct: 25 GASVPSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAEVDDDMQTEKDKWKGLAFDTSDDQQ 84
Query: 292 DITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLVV 471 DI RGKGMVD+LFQ + GT +AVMSSYEYISTG R + +DN DG+YIAPAFMDKLVV Sbjct: 85 DIVRGKGMVDSLFQAPMDAGTHYAVMSSYEYISTGLRQYNLDNNMDGFYIAPAFMDKLVV 144
Query: 472 HIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 HI KNFM LPNIK+PLILGIWGGKGQGKSFQCE Sbjct: 145 HITKNFMTLPNIKVPLILGIWGGKGQGKSFQCE 177
Score = 54.3 bits (129), Expect(2) = 4e-65 Identities = 25/27 (92%), Positives = 27/27 (100%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVFSK+GINPIMMSAGELESGNAGEP Sbjct: 177 ELVFSKMGINPIMMSAGELESGNAGEP 203
>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001 PE=4 SV=1 Length = 472
Score = 215 bits (548), Expect(2) = 2e-64 Identities = 104/154 (67%), Positives = 122/154 (79%) Frame = +1
Query: 109 TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 288 TG +VP+SAF G+ LKK + T ++ V A DE++QT+KD+W GLAYD SDDQ Sbjct: 23 TGASVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQ 82
Query: 289 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 468 QDITRGKGMVD+LFQ + GT +AVMSSYEY+STG R + +DN DG+YIAPAFMDKLV Sbjct: 83 QDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLV 142
Query: 469 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCE Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCE 176
Score = 54.3 bits (129), Expect(2) = 2e-64 Identities = 25/27 (92%), Positives = 27/27 (100%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVFSK+GINPIMMSAGELESGNAGEP Sbjct: 176 ELVFSKMGINPIMMSAGELESGNAGEP 202
>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039112 PE=4 SV=1 Length = 472
Score = 215 bits (548), Expect(2) = 2e-64 Identities = 104/154 (67%), Positives = 122/154 (79%) Frame = +1
Query: 109 TGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 288 TG +VP+SAF G+ LKK + T ++ V A DE++QT+KD+W GLAYD SDDQ Sbjct: 23 TGXSVPSSAFFGSSLKKVSSRFTHPKIASGSFKVVAEIDENEQTEKDRWKGLAYDVSDDQ 82
Query: 289 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 468 QDITRGKGMVD+LFQ + GT +AVMSSYEY+STG R + +DN DG+YIAPAFMDKLV Sbjct: 83 QDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLV 142
Query: 469 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 VHI KNFM LPNIK+PLILGIWGGKGQGKSFQCE Sbjct: 143 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCE 176
Score = 54.3 bits (129), Expect(2) = 2e-64 Identities = 25/27 (92%), Positives = 27/27 (100%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVFSK+GINPIMMSAGELESGNAGEP Sbjct: 176 ELVFSKMGINPIMMSAGELESGNAGEP 202
>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase large protein isoform OS=Acer rubrum PE=2 SV=1 Length = 474
Score = 213 bits (541), Expect(2) = 2e-62 Identities = 108/160 (67%), Positives = 120/160 (75%) Frame = +1
Query: 91 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 270 L S G VP SAF G LKK + V A DE+KQT+KDKW GLAY Sbjct: 18 LNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAY 77
Query: 271 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 450 DTSDDQQDITRGKG+VD+LFQ G GT +AVMSSY+YISTG RT+ ++N DG+YIAPA Sbjct: 78 DTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPA 136
Query: 451 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 FMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQCE Sbjct: 137 FMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCE 176
Score = 50.8 bits (120), Expect(2) = 2e-62 Identities = 23/27 (85%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF+K+GI PIMMSAGELESGNAGEP Sbjct: 176 ELVFAKMGITPIMMSAGELESGNAGEP 202
>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase small protein isoform OS=Acer rubrum PE=2 SV=1 Length = 437
Score = 213 bits (541), Expect(2) = 2e-62 Identities = 108/160 (67%), Positives = 120/160 (75%) Frame = +1
Query: 91 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 270 L S G VP SAF G LKK + V A DE+KQT+KDKW GLAY Sbjct: 18 LNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAY 77
Query: 271 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 450 DTSDDQQDITRGKG+VD+LFQ G GT +AVMSSY+YISTG RT+ ++N DG+YIAPA Sbjct: 78 DTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPA 136
Query: 451 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 FMDKLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQCE Sbjct: 137 FMDKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCE 176
Score = 50.8 bits (120), Expect(2) = 2e-62 Identities = 23/27 (85%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF+K+GI PIMMSAGELESGNAGEP Sbjct: 176 ELVFAKMGITPIMMSAGELESGNAGEP 202
>tr|A3KN35|A3KN35_BOVIN Putative uncharacterized protein OS=Bos taurus PE=2 SV=1 Length = 446
Score = 209 bits (533), Expect(2) = 1e-61 Identities = 105/154 (68%), Positives = 119/154 (77%), Gaps = 3/154 (1%) Frame = +1
Query: 118 AVPASAFLGAGLKK---SNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAYDTSDDQ 288 AVP+S FLG+ LKK S I +S K L +E++QT KD+W GLAYD SDDQ Sbjct: 27 AVPSSNFLGSSLKKISNSRIVNNNKFASFKILAAEKEIEETQQTDKDRWKGLAYDISDDQ 86
Query: 289 QDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFMDKLV 468 QDITRGKGMVD+LFQ +GT AVMSSYEYISTG RT+ +DN DG+YIAPAFMDKLV Sbjct: 87 QDITRGKGMVDSLFQAPQDVGTHFAVMSSYEYISTGLRTYNLDNTMDGFYIAPAFMDKLV 146
Query: 469 VHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 VHI KNFM LPNIK+PLILG+WGGKGQGKSFQCE Sbjct: 147 VHITKNFMTLPNIKVPLILGVWGGKGQGKSFQCE 180
Score = 50.8 bits (120), Expect(2) = 1e-61 Identities = 23/27 (85%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF+K+GI PIMMSAGELESGNAGEP Sbjct: 180 ELVFAKMGITPIMMSAGELESGNAGEP 206
>tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase large protein isoform OS=Acer rubrum PE=2 SV=1 Length = 474
Score = 208 bits (530), Expect(2) = 3e-61 Identities = 106/160 (66%), Positives = 118/160 (73%) Frame = +1
Query: 91 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 270 L S G VP SAF G LKK + V A DE+KQT+KDKW GLAY Sbjct: 18 LNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAY 77
Query: 271 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 450 DTSDDQQDITRGKG+VD+LFQ G GT +AVMSSY+YISTG RT+ ++N DG+YIAP Sbjct: 78 DTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPV 136
Query: 451 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 FM KLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQCE Sbjct: 137 FMGKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCE 176
Score = 50.8 bits (120), Expect(2) = 3e-61 Identities = 23/27 (85%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF+K+GI PIMMSAGELESGNAGEP Sbjct: 176 ELVFAKMGITPIMMSAGELESGNAGEP 202
>tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase activase small protein isoform OS=Acer rubrum PE=2 SV=1 Length = 437
Score = 208 bits (530), Expect(2) = 3e-61 Identities = 106/160 (66%), Positives = 118/160 (73%) Frame = +1
Query: 91 LGPSPCTGQAVPASAFLGAGLKKSNISITPATSSAKPLVVHASEDESKQTKKDKWAGLAY 270 L S G VP SAF G LKK + V A DE+KQT+KDKW GLAY Sbjct: 18 LNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGLAY 77
Query: 271 DTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPA 450 DTSDDQQDITRGKG+VD+LFQ G GT +AVMSSY+YISTG RT+ ++N DG+YIAP Sbjct: 78 DTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYDYISTGLRTY-LENSMDGFYIAPV 136
Query: 451 FMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 FM KLVVHI KNFM+LPNIKIPLILGIWGGKGQGKSFQCE Sbjct: 137 FMGKLVVHITKNFMSLPNIKIPLILGIWGGKGQGKSFQCE 176
Score = 50.8 bits (120), Expect(2) = 3e-61 Identities = 23/27 (85%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF+K+GI PIMMSAGELESGNAGEP Sbjct: 176 ELVFAKMGITPIMMSAGELESGNAGEP 202
>tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum annuum PE=2 SV=1 Length = 439
Score = 200 bits (508), Expect(2) = 4e-59 Identities = 98/158 (62%), Positives = 116/158 (73%), Gaps = 4/158 (2%) Frame = +1
Query: 109 TGQAVPASAFLGAGLKK---SNISITPATSSAKPLVVHASE-DESKQTKKDKWAGLAYDT 276 +G +VP++AF G LKK IS ++ + +V E DE KQT D+W GL D Sbjct: 23 SGTSVPSTAFFGKSLKKVYGKGISSPKVSNRSLRIVAEEKEIDEKKQTDGDRWKGLGTDV 82
Query: 277 SDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDGYYIAPAFM 456 SDDQQDI RGKGMVD+LFQ G GT HA+M+SYEY+S G + + MDN DG+YIAPAFM Sbjct: 83 SDDQQDIARGKGMVDSLFQAPTGTGTHHAIMNSYEYLSQGLKQYSMDNKLDGFYIAPAFM 142
Query: 457 DKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 DKLVVHI KNF+ LPNIKIPLILG+WGGKGQGKSFQCE Sbjct: 143 DKLVVHITKNFLQLPNIKIPLILGVWGGKGQGKSFQCE 180
Score = 52.4 bits (124), Expect(2) = 4e-59 Identities = 24/27 (88%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF K+GINPIMMSAGELESGNAGEP Sbjct: 180 ELVFRKMGINPIMMSAGELESGNAGEP 206
>tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rca PE=2 SV=1 Length = 439
Score = 199 bits (507), Expect(2) = 5e-59 Identities = 100/166 (60%), Positives = 116/166 (69%), Gaps = 9/166 (5%) Frame = +1
Query: 100 SPCTGQAVPASAFLGAGLKKSNISITPATS---------SAKPLVVHASEDESKQTKKDK 252 +P P + F G LKK +S +S S+ P DESKQT +D+ Sbjct: 14 APVGASLAPNTGFYGKSLKK--VSFRNGSSKNMNWQIRASSDPSPAQPEIDESKQTHEDR 71
Query: 253 WAGLAYDTSDDQQDITRGKGMVDALFQGAVGLGTQHAVMSSYEYISTGQRTFQMDNMKDG 432 W GL D SDDQQDITRGKG+VD LFQ +G GT HAV+SSYEY+S GQ+T+ +DN DG Sbjct: 72 WKGLVEDISDDQQDITRGKGLVDTLFQAPMGTGTHHAVLSSYEYVSQGQKTYSLDNKLDG 131
Query: 433 YYIAPAFMDKLVVHIAKNFMNLPNIKIPLILGIWGGKGQGKSFQCE 570 +YIAPAFMDKLVVHI KNF+ LPNIKIPLILGIWGGKGQGKSFQCE Sbjct: 132 FYIAPAFMDKLVVHITKNFLKLPNIKIPLILGIWGGKGQGKSFQCE 177
Score = 52.4 bits (124), Expect(2) = 5e-59 Identities = 24/27 (88%), Positives = 26/27 (96%) Frame = +2
Query: 569 KLVFSKLGINPIMMSAGELESGNAGEP 649 +LVF K+GINPIMMSAGELESGNAGEP Sbjct: 177 ELVFRKMGINPIMMSAGELESGNAGEP 203
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