DK953593
Clone id TST39A01NGRL0018_D01
Library
Length 609
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_D01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CCCACACACACACACACACATACACACACTTGCGGGGACAGCGATGTCAGCCCGCAAACC
GCGTTTCGAAGAGAGAGAATCGTGAAGCAGAGCTTCTCCCTCCTAGTCCCCCTCTTCCCT
CTCAGATCCCTTCCCTCTTTTCCTGTTTAATGCTTTCGCAAAGATAGAGAAGCGCGCAGA
CAGCCGGCAGAAAGCTCGCAGAAAGGAGCCCCCCAACCCCTTTCTTCCTTTTGCAGGTGG
AAGCCTTCAGTTTGTGGTACTCAAAGCTCAGCCATGGCGGTGCTAATGAATAGCCTGCTT
TCTCCCCCTTTTCGGCTGCTGGAGAGATAAGGTGTCAGCACGTAGAAACGCAAGGTTAGC
GAGATTGCGAAAGTTTTTTTGCGAGTGTGATCTTCGAAAGCAGTCAATTTAGCAGGAAGC
AACAGGCAAGGAAGCAGGGGGCAAGGTGGAAGGTAGGAAATTGGTAGAAGCTCTGCAGAA
CAGGAGCAAGCCCACAGATCTGGTGGAACAGAGACCGGACATGGTCGTTAAGATGATGAA
ATGGCGGCCCTGGCCTTCTGTCACCTCCAAAAAAGTTCCAAGTTTACCTTACTGTTTCAG
CCCTAGAAG
■■Homology search results ■■ -
sp_hit_id Q86CR9
Definition sp|Q86CR9|ATG7_DICDI Autophagy-related protein 7 OS=Dictyostelium discoideum
Align length 50
Score (bit) 34.7
E-value 0.39
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953593|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_D01, 5'
(609 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q86CR9|ATG7_DICDI Autophagy-related protein 7 OS=Dictyosteliu... 35 0.39
sp|Q871U2|ATG7_NEUCR Autophagy-related protein 7 OS=Neurospora c... 34 0.67
sp|P47152|YJ85_YEAST Uncharacterized protein YJR115W OS=Saccharo... 26 2.3
sp|A6QXC6|ATG7_AJECN Autophagy-related protein 7 OS=Ajellomyces ... 32 2.5
sp|Q61045|SIM1_MOUSE Single-minded homolog 1 OS=Mus musculus GN=... 30 7.4
sp|Q5JKF2|RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40 OS=O... 30 7.4

>sp|Q86CR9|ATG7_DICDI Autophagy-related protein 7 OS=Dictyostelium
discoideum GN=atg7 PE=3 SV=1
Length = 707

Score = 34.7 bits (78), Expect = 0.39
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2

Query: 428 KEAGGKVEGRKLVEALQNRSKPTDLVEQRPDMVVKMMKWRPWPSVTSKKV 577
K++ GK+ R + +L + P L EQ D+ +K+M+WR PS+ +K+
Sbjct: 312 KDSNGKIAPRFV--SLASTMDPLKLAEQSVDLNLKLMRWRVMPSLELEKI 359


>sp|Q871U2|ATG7_NEUCR Autophagy-related protein 7 OS=Neurospora
crassa GN=atg-7 PE=3 SV=1
Length = 699

Score = 33.9 bits (76), Expect = 0.67
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2

Query: 416 EATGKEAGGKVEGRKLVEALQNRSKPTDLVEQRPDMVVKMMKWRPWPSV 562
+ TG E G + R V L PT L +Q D+ +K+MKWR P++
Sbjct: 308 KVTGWERNGNGDLRPRVANLAEYMDPTRLADQAVDLNLKLMKWRLAPNL 356


>sp|P47152|YJ85_YEAST Uncharacterized protein YJR115W
OS=Saccharomyces cerevisiae GN=YJR115W PE=4 SV=1
Length = 169

Score = 26.2 bits (56), Expect(2) = 2.3
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3

Query: 3 HTHTHTYTHL 32
HTHTHT+TH+
Sbjct: 21 HTHTHTHTHI 30



Score = 24.6 bits (52), Expect(2) = 2.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2

Query: 5 HTHTHIHTLAGTAMSAR 55
HTHTHI+ G +S R
Sbjct: 25 HTHTHIYIYTGDQVSVR 41


>sp|A6QXC6|ATG7_AJECN Autophagy-related protein 7 OS=Ajellomyces
capsulata (strain NAm1 / WU24) GN=ATG7 PE=3 SV=1
Length = 695

Score = 32.0 bits (71), Expect = 2.5
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2

Query: 428 KEAGGKVEGRKLVEALQNRSKPTDLVEQRPDMVVKMMKWRPWPSVTSKKV 577
+ A GK+ GR V L P L +Q D+ +K+MKWR P++ + +
Sbjct: 329 RNAAGKLTGR--VTNLTEYMDPRRLADQSVDLNLKLMKWRISPNLNLENI 376


>sp|Q61045|SIM1_MOUSE Single-minded homolog 1 OS=Mus musculus
GN=Sim1 PE=1 SV=3
Length = 765

Score = 30.4 bits (67), Expect = 7.4
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2

Query: 335 TPYLSSSRKGGESRLFISTAMAEL-*VPQTEGFHLQKEE 222
TP +S +RKG +SRL S + + PQ GFH ++ E
Sbjct: 361 TPTISDNRKGAKSRLSSSKSKSRTSPYPQYSGFHTERSE 399


>sp|Q5JKF2|RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40
OS=Oryza sativa subsp. japonica GN=Os01g0549400 PE=2
SV=2
Length = 792

Score = 30.4 bits (67), Expect = 7.4
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -2

Query: 245 GFHLQKEERGWGAPFCELSAGCLRASLSLRKH*TGKEGRDLRGKRGTRREK 93
G H + + R G S+G L +S S R+H G +GR R RG R +
Sbjct: 549 GSHSELDSRYGGRDGLSGSSGRLDSSRSSRRHDYGDDGRSRRSGRGRSRSR 599


tr_hit_id Q9SF22
Definition tr|Q9SF22|Q9SF22_ARATH F26K24.5 protein OS=Arabidopsis thaliana
Align length 18
Score (bit) 36.2
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953593|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_D01, 5'
(609 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9SF22|Q9SF22_ARATH F26K24.5 protein OS=Arabidopsis thaliana ... 36 1.5
tr|Q0WKW4|Q0WKW4_ARATH Putative uncharacterized protein At3g1176... 36 1.5
tr|Q0GNK9|Q0GNK9_9ZZZZ Putative uncharacterized protein OS=uncul... 36 2.0
tr|B3ED75|B3ED75_CHLL2 UbiA prenyltransferase OS=Chlorobium limi... 35 3.4
tr|B2B4M3|B2B4M3_PODAN Predicted CDS Pa_2_1770 OS=Podospora anse... 35 4.4
tr|A7Q079|A7Q079_VITVI Chromosome chr8 scaffold_41, whole genome... 34 7.5
tr|A4IE47|A4IE47_LEIIN Putative uncharacterized protein OS=Leish... 27 7.8
tr|Q38DI0|Q38DI0_9TRYP Putative uncharacterized protein OS=Trypa... 33 9.8

>tr|Q9SF22|Q9SF22_ARATH F26K24.5 protein OS=Arabidopsis thaliana
GN=At3g11760 PE=4 SV=1
Length = 702

Score = 36.2 bits (82), Expect = 1.5
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2

Query: 521 MVVKMMKWRPWPSVTSKK 574
MVVKMMKWRPWP + ++K
Sbjct: 1 MVVKMMKWRPWPPLVTRK 18


>tr|Q0WKW4|Q0WKW4_ARATH Putative uncharacterized protein At3g11760
OS=Arabidopsis thaliana GN=At3g11760 PE=2 SV=1
Length = 394

Score = 36.2 bits (82), Expect = 1.5
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2

Query: 521 MVVKMMKWRPWPSVTSKK 574
MVVKMMKWRPWP + ++K
Sbjct: 1 MVVKMMKWRPWPPLVTRK 18


>tr|Q0GNK9|Q0GNK9_9ZZZZ Putative uncharacterized protein
OS=uncultured organism PE=4 SV=1
Length = 140

Score = 35.8 bits (81), Expect = 2.0
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3

Query: 3 HTHTHTYTHLRGQRCQPANRVSKRENREAE 92
HTHTHT+TH +R + RVS+RE RE E
Sbjct: 88 HTHTHTHTHTHAERERERERVSERE-RERE 116


>tr|B3ED75|B3ED75_CHLL2 UbiA prenyltransferase OS=Chlorobium
limicola (strain DSM 245 / NBRC 103803) GN=Clim_1440
PE=4 SV=1
Length = 340

Score = 35.0 bits (79), Expect = 3.4
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = -1

Query: 552 QGRHFIILTTMSGLCSTRSVGLLLFCRASTNFLP-STLPPASLPVASC*IDCFRRSHSQK 376
Q +HF+I+T+++ GLLLFC TN LP ST + VA I H +
Sbjct: 260 QTKHFLIITSLAS-------GLLLFCLTFTNSLPASTYFLLANNVAVILIASMYNEHKEA 312

Query: 375 NFRNLANLAFLRADTLSL 322
R +++++ L A L L
Sbjct: 313 FMRKISDMSILLATILFL 330


>tr|B2B4M3|B2B4M3_PODAN Predicted CDS Pa_2_1770 OS=Podospora
anserina PE=4 SV=1
Length = 697

Score = 34.7 bits (78), Expect = 4.4
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2

Query: 416 EATGKEAGGKVEGRKLVEALQNRSKPTDLVEQRPDMVVKMMKWRPWPSV 562
+ TG E G + R+ V L PT L +Q D+ +K+MKWR P++
Sbjct: 312 DVTGWERDGGSKLRRRVADLAEYMDPTKLADQAVDLNLKLMKWRLAPNL 360


>tr|A7Q079|A7Q079_VITVI Chromosome chr8 scaffold_41, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027182001
PE=4 SV=1
Length = 715

Score = 33.9 bits (76), Expect = 7.5
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2

Query: 521 MVVKMMKWRPWPSVTSKK 574
MVVKMM+WRPWP + +K
Sbjct: 1 MVVKMMRWRPWPPLIPRK 18


>tr|A4IE47|A4IE47_LEIIN Putative uncharacterized protein
OS=Leishmania infantum GN=LinJ36.6870 PE=4 SV=1
Length = 1712

Score = 26.9 bits (58), Expect(2) = 7.8
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2

Query: 5 HTHTHIHTLAGT 40
HTHTH HT+ GT
Sbjct: 20 HTHTHTHTMLGT 31



Score = 25.4 bits (54), Expect(2) = 7.8
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3

Query: 3 HTHTHTYTH 29
HTHTHT+TH
Sbjct: 14 HTHTHTHTH 22


>tr|Q38DI0|Q38DI0_9TRYP Putative uncharacterized protein
OS=Trypanosoma brucei GN=Tb09.211.3260 PE=4 SV=1
Length = 169

Score = 33.5 bits (75), Expect = 9.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3

Query: 3 HTHTHTYTHLRGQRCQPANRVSKRENRE 86
HTHTHTYTH + + A +K+ RE
Sbjct: 133 HTHTHTYTHTHNNKKRQAKERNKQNERE 160