DK953608
Clone id TST39A01NGRL0018_D16
Library
Length 444
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_D16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AAAAGATGTCTTCAGGGGAGTTGACTCTTCATGGCGGTTACTATGATTTTGTGAACAATG
CATTTGAGAGTTGGTCGGTAGATTTGGCATCAATGTCGAAGGTCGAAAAGGTGCATTAAG
TGGGTACAGACTGTCTCTAGGATGGAGGGTAACTAACAAAGAATTGCTGTGAGCGGCAAA
TAGCCTTCCTCTTCTCACGAGAGAGAAAGATGGTGTAGCAGCAATGAGTGTTCTTCATGG
CATATGAGTTATATTGCTCTTGATTCGAGTTATGCATATCCAGAAAAACCATCTTGAGTG
TATCATATATTGTAACTAATCGATGGCATCGGGTTGGGACTATGGTTAACTAATTTTTCA
TCTTGTTGCAGCTACTAAAGTATCAATTTTATTGAATCCATCTCATGTGATTTCTTTTTG
GTGAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P27140
Definition sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana
Align length 35
Score (bit) 37.0
E-value 0.032
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953608|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_D16, 5'
(423 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabid... 37 0.032
sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thalian... 36 0.054
sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=... 35 0.092
sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2... 35 0.092
sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinac... 35 0.092
sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis P... 35 0.092
sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=... 35 0.12
sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria... 33 0.35
sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sa... 33 0.46
sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicoti... 33 0.60
sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeu... 32 0.78
sp|P46551|CD2L7_CAEEL Putative cell division cycle 2-related pro... 30 3.0
sp|Q8K371|AMOL2_MOUSE Angiomotin-like protein 2 OS=Mus musculus ... 29 6.6
sp|Q9Y2J4|AMOL2_HUMAN Angiomotin-like protein 2 OS=Homo sapiens ... 29 6.6
sp|Q9PR43|Y101_UREPA Uncharacterized protein UU101 OS=Ureaplasma... 29 8.6
sp|Q6FNJ1|IPI3_CANGA Pre-rRNA-processing protein IPI3 OS=Candida... 29 8.8

>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic
OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2
Length = 347

Score = 37.0 bits (84), Expect = 0.032
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3

Query: 15 GELTLHGGYYDFVNNAFESWSVD--LASMSKVEKV 113
G L L GGYYDFV AFE W ++ L+ S V+ V
Sbjct: 305 GTLALKGGYYDFVKGAFELWGLEFGLSETSSVKDV 339


>sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thaliana
GN=CA2 PE=1 SV=2
Length = 259

Score = 36.2 bits (82), Expect = 0.054
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3

Query: 15 GELTLHGGYYDFVNNAFESWSV 80
G L L GGYYDFVN +FE W +
Sbjct: 228 GTLALKGGYYDFVNGSFELWEL 249


>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2
SV=1
Length = 329

Score = 35.4 bits (80), Expect = 0.092
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3

Query: 6 MSSGELTLHGGYYDFVNNAFESWSVDLASMS 98
+ + L L GG+YDFVN FE W++D S
Sbjct: 295 LRNNTLALKGGHYDFVNGTFELWALDFGLSS 325


>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2
SV=1
Length = 330

Score = 35.4 bits (80), Expect = 0.092
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3

Query: 6 MSSGELTLHGGYYDFVNNAFESWSVDLASMS 98
+ + L L GG+YDFVN FE W++D S
Sbjct: 296 LRNNTLALKGGHYDFVNGTFELWALDFGLSS 326


>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia
oleracea PE=1 SV=2
Length = 319

Score = 35.4 bits (80), Expect = 0.092
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3

Query: 21 LTLHGGYYDFVNNAFESWSVD 83
L L GGYYDFVN +FE W ++
Sbjct: 290 LALQGGYYDFVNGSFELWGLE 310


>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2
SV=1
Length = 330

Score = 35.4 bits (80), Expect = 0.092
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3

Query: 6 MSSGELTLHGGYYDFVNNAFESWSVDLASMS 98
+ + L L GG+YDFVN FE W++D S
Sbjct: 296 LRNNTLALKGGHYDFVNGTFELWALDFGLSS 326


>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2
SV=2
Length = 330

Score = 35.0 bits (79), Expect = 0.12
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3

Query: 21 LTLHGGYYDFVNNAFESWSVDLASMS 98
L L GG+YDFVN FE W++D S
Sbjct: 301 LALKGGHYDFVNGTFELWALDFGLSS 326


>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria
linearis PE=2 SV=1
Length = 190

Score = 33.5 bits (75), Expect = 0.35
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +3

Query: 18 ELTLHGGYYDFVNNAFESWSVD 83
+L+L G +YDFVN AF+ W++D
Sbjct: 160 KLSLKGAHYDFVNGAFDLWNLD 181


>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum
sativum PE=1 SV=1
Length = 328

Score = 33.1 bits (74), Expect = 0.46
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3

Query: 21 LTLHGGYYDFVNNAFESWSVDLASMS 98
L L GGYYDFV +FE W ++ S
Sbjct: 299 LALKGGYYDFVKGSFELWGLEFGLSS 324


>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana
tabacum PE=2 SV=1
Length = 321

Score = 32.7 bits (73), Expect = 0.60
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3

Query: 21 LTLHGGYYDFVNNAFESWSVD 83
L L GG+YDFVN FE W ++
Sbjct: 292 LALKGGHYDFVNGGFELWGLE 312


tr_hit_id Q94CE3
Definition tr|Q94CE3|Q94CE3_ARATH Carbonic anhydrase OS=Arabidopsis thaliana
Align length 30
Score (bit) 43.1
E-value 0.007
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953608|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_D16, 5'
(423 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q94CE3|Q94CE3_ARATH Carbonic anhydrase OS=Arabidopsis thalian... 43 0.007
tr|Q2V3C0|Q2V3C0_ARATH Carbonic anhydrase OS=Arabidopsis thalian... 43 0.007
tr|O81875|O81875_ARATH Carbonate dehydratase-like protein OS=Ara... 43 0.007
tr|A7NUN0|A7NUN0_VITVI Carbonic anhydrase OS=Vitis vinifera GN=G... 42 0.015
tr|A5B0N2|A5B0N2_VITVI Putative uncharacterized protein OS=Vitis... 42 0.015
tr|A7QVV7|A7QVV7_VITVI Carbonic anhydrase OS=Vitis vinifera GN=G... 42 0.020
tr|A5C5J0|A5C5J0_VITVI Carbonic anhydrase OS=Vitis vinifera GN=V... 42 0.020
tr|A9RV59|A9RV59_PHYPA Carbonic anhydrase OS=Physcomitrella pate... 40 0.075
tr|A9P240|A9P240_PICSI Carbonic anhydrase OS=Picea sitchensis PE... 38 0.28
tr|A6XN03|A6XN03_PRUPE Carbonic anhydrase OS=Prunus persica PE=3... 38 0.28
tr|A7Y7M9|A7Y7M9_PRUDU Carbonic anhydrase (Fragment) OS=Prunus d... 37 0.37
tr|B7ZYT1|B7ZYT1_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.49
tr|B6TGY7|B6TGY7_MAIZE Carbonic anhydrase OS=Zea mays PE=2 SV=1 37 0.49
tr|B4FWC5|B4FWC5_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.49
tr|B4FJQ5|B4FJQ5_MAIZE Putative uncharacterized protein OS=Zea m... 37 0.49
tr|Q69MC9|Q69MC9_ORYSJ Carbonic anhydrase OS=Oryza sativa subsp.... 37 0.63
tr|B8BCM5|B8BCM5_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.63
tr|A3BZP0|A3BZP0_ORYSJ Carbonic anhydrase OS=Oryza sativa subsp.... 37 0.63
tr|A1XX45|A1XX45_9MAGN Carbonic anhydrase OS=Pachysandra termina... 37 0.63
tr|Q9LLL5|Q9LLL5_PYRPY Carbonic anhydrase isoform 1 OS=Pyrus pyr... 36 0.83
tr|Q3E9H5|Q3E9H5_ARATH Carbonic anhydrase OS=Arabidopsis thalian... 36 0.83
tr|Q2V377|Q2V377_ARATH Carbonic anhydrase OS=Arabidopsis thalian... 36 0.83
tr|Q2V376|Q2V376_ARATH Carbonic anhydrase OS=Arabidopsis thalian... 36 0.83
tr|Q7S888|Q7S888_NEUCR Predicted protein OS=Neurospora crassa GN... 36 1.1
tr|Q56X90|Q56X90_ARATH Carbonic anhydrase OS=Arabidopsis thalian... 36 1.1
tr|Q56WK1|Q56WK1_ARATH Carbonic anhydrase OS=Arabidopsis thalian... 36 1.1
tr|B6V6R6|B6V6R6_9CONI Putative carbonate dehydratase protein (F... 36 1.1
tr|A7PM94|A7PM94_VITVI Carbonic anhydrase OS=Vitis vinifera GN=G... 36 1.1
tr|A5BQL5|A5BQL5_VITVI Carbonic anhydrase OS=Vitis vinifera GN=V... 36 1.1
tr|Q6Q9W7|Q6Q9W7_THLCA Carbonic anhydrase OS=Thlaspi caerulescen... 35 1.4

>tr|Q94CE3|Q94CE3_ARATH Carbonic anhydrase OS=Arabidopsis thaliana
GN=At4g33580 PE=2 SV=1
Length = 301

Score = 43.1 bits (100), Expect = 0.007
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3

Query: 3 KMSSGELTLHGGYYDFVNNAFESWSVDLAS 92
K+ G L+LHGGYY+FV+ FE W+VD A+
Sbjct: 252 KVRQGSLSLHGGYYNFVDCTFEKWTVDYAA 281


>tr|Q2V3C0|Q2V3C0_ARATH Carbonic anhydrase OS=Arabidopsis thaliana
GN=At4g33580 PE=3 SV=1
Length = 302

Score = 43.1 bits (100), Expect = 0.007
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3

Query: 3 KMSSGELTLHGGYYDFVNNAFESWSVDLAS 92
K+ G L+LHGGYY+FV+ FE W+VD A+
Sbjct: 253 KVRQGSLSLHGGYYNFVDCTFEKWTVDYAA 282


>tr|O81875|O81875_ARATH Carbonate dehydratase-like protein
OS=Arabidopsis thaliana GN=T16L1.70 PE=4 SV=1
Length = 173

Score = 43.1 bits (100), Expect = 0.007
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3

Query: 3 KMSSGELTLHGGYYDFVNNAFESWSVDLAS 92
K+ G L+LHGGYY+FV+ FE W+VD A+
Sbjct: 124 KVRQGSLSLHGGYYNFVDCTFEKWTVDYAA 153


>tr|A7NUN0|A7NUN0_VITVI Carbonic anhydrase OS=Vitis vinifera
GN=GSVIVT00015113001 PE=3 SV=1
Length = 236

Score = 42.0 bits (97), Expect = 0.015
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +3

Query: 15 GELTLHGGYYDFVNNAFESWSVDLASMSKVEKVH*VGTDCL 137
G L++HGGYYDF+N FE W++D S +EK G CL
Sbjct: 192 GLLSIHGGYYDFLNCTFEKWTIDF-KRSSIEK---EGPKCL 228


>tr|A5B0N2|A5B0N2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_003553 PE=4 SV=1
Length = 356

Score = 42.0 bits (97), Expect = 0.015
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +3

Query: 15 GELTLHGGYYDFVNNAFESWSVDLASMSKVEKVH*VGTDCL 137
G L++HGGYYDF+N FE W++D S +EK G CL
Sbjct: 312 GLLSIHGGYYDFLNCTFEKWTIDF-KRSSIEK---EGPKCL 348


>tr|A7QVV7|A7QVV7_VITVI Carbonic anhydrase OS=Vitis vinifera
GN=GSVIVT00007538001 PE=3 SV=1
Length = 262

Score = 41.6 bits (96), Expect = 0.020
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3

Query: 3 KMSSGELTLHGGYYDFVNNAFESWSVD 83
++ G L++HGGYYDFVN FE W++D
Sbjct: 220 RVERGMLSIHGGYYDFVNCTFEKWTLD 246


>tr|A5C5J0|A5C5J0_VITVI Carbonic anhydrase OS=Vitis vinifera
GN=VITISV_005703 PE=3 SV=1
Length = 211

Score = 41.6 bits (96), Expect = 0.020
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3

Query: 3 KMSSGELTLHGGYYDFVNNAFESWSVD 83
++ G L++HGGYYDFVN FE W++D
Sbjct: 169 RVERGMLSIHGGYYDFVNCTFEKWTLD 195


>tr|A9RV59|A9RV59_PHYPA Carbonic anhydrase OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_205864 PE=3 SV=1
Length = 253

Score = 39.7 bits (91), Expect = 0.075
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3

Query: 3 KMSSGELTLHGGYYDFVNNAFESWSVDL 86
K+ +L+LHGGYYDFV F++W +D+
Sbjct: 218 KVIGNKLSLHGGYYDFVKGYFQTWDLDI 245


>tr|A9P240|A9P240_PICSI Carbonic anhydrase OS=Picea sitchensis PE=2
SV=1
Length = 303

Score = 37.7 bits (86), Expect = 0.28
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +3

Query: 6 MSSGELTLHGGYYDFVNNAFESWSV 80
++ +L+LHGGYYDFV FE W+V
Sbjct: 258 VAQDKLSLHGGYYDFVEGYFEQWTV 282


>tr|A6XN03|A6XN03_PRUPE Carbonic anhydrase OS=Prunus persica PE=3
SV=1
Length = 301

Score = 37.7 bits (86), Expect = 0.28
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3

Query: 21 LTLHGGYYDFVNNAFESWSVDLASMSKV 104
L+LHGGYYDF+ FE W++D+ + V
Sbjct: 260 LSLHGGYYDFLRCTFEKWTLDMNGIRPV 287