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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953609
Clone id TST39A01NGRL0018_D17
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_D17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CATGATTCTAGGAATATGTCCGGAGGAACCTATAGGGAGGTGTGATGGATTGCTGGAAAT
TCTTCTACTAAGATGCTGATGGAGGCCTTGCATGCAGTCCCTTATTCTTGCTGCGGCTTC
AACCCTCTACGCGGAGTATCATTTTCAGCATCATCATCATCATCGGCTCGCCCTCTCGCA
GCTCCTCCCTCACCATTGTTCTCTCCATTGACTAATTCTGGAAGGGGAAGGCGCAGAAGA
TCCATTTCCATGGATTCGGCTCGAGCCTCAATCGGGCTTCTAGAAACCTTACAAAGCCAG
ATTAACACAGAGGGTGTGAAAGTTGAGGAAGGGAAAGGGGGTCTTCCTAAATTAGTTTTG
ACAGAATCATCTGGCAGTCAGGCAGAGATCTATGTATTTGGAGCATGTGTTACATCTTGG
CGGCTTTCAAGTGGAAAAGACCTGCTGTTCGTTCGGCCTGACGCACTTTTCAACGGGCAA
AAACCCATTAGTGGAGGAATTTCCACACTGTTTTCCACAGTTTGGACCAGGGCCTATTCA
ACAGCATGGTTTTGCCCGCAATC
■■Homology search results ■■ -
sp_hit_id Q40784
Definition sp|Q40784|AAPC_CENCI Putative apospory-associated protein C OS=Cenchrus ciliaris
Align length 53
Score (bit) 48.5
E-value 2.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953609|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_D17, 5'
         (563 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40784|AAPC_CENCI Putative apospory-associated protein C OS=C...    49   2e-09
sp|Q03161|YMY9_YEAST UPF0010 protein YMR099C OS=Saccharomyces ce...    36   0.11 
sp|Q8BB25|SPIKE_CVP67 Spike glycoprotein OS=Porcine hemagglutina...    30   8.2  

>sp|Q40784|AAPC_CENCI Putative apospory-associated protein C
           OS=Cenchrus ciliaris PE=2 SV=1
          Length = 329

 Score = 48.5 bits (114), Expect(2) = 2e-09
 Identities = 24/53 (45%), Positives = 34/53 (64%)
 Frame = +1

Query: 343 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGI 501
           L K+VL  +    AEIY++G  VTSW+  +G++LLF+   A+F   K I GGI
Sbjct: 33  LEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGI 85



 Score = 32.3 bits (72), Expect(2) = 2e-09
 Identities = 14/21 (66%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +2

Query: 503 PHCFPQFGP-GPIQQHGFARN 562
           P C PQFG  G ++QHGFARN
Sbjct: 86  PICLPQFGTHGNLEQHGFARN 106


>sp|Q03161|YMY9_YEAST UPF0010 protein YMR099C OS=Saccharomyces
           cerevisiae GN=YMR099C PE=1 SV=1
          Length = 297

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
 Frame = +1

Query: 349 KLVLTESSGSQAEIYV--FGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGISTLF 513
           ++VLT  +     +++  +GA V SW+L S ++ L++   A  +G KP+ GGI  +F
Sbjct: 9   EVVLTHPADETTSVHILKYGATVYSWKLKS-EEQLWLSTAAKLDGSKPVRGGIPLVF 64


>sp|Q8BB25|SPIKE_CVP67 Spike glycoprotein OS=Porcine
           hemagglutinating encephalomyelitis virus (strain 67N)
           GN=S PE=3 SV=1
          Length = 1349

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 439 DLLFVRPDALFNGQKPISGGISTLFSTVWTRAYSTAWFCP 558
           D +++    L NG  PISG      +   TR  ST WF P
Sbjct: 54  DRVYLNTTLLLNGYYPISGATFRNMALKGTRLLSTLWFKP 93
tr_hit_id A7PUT1
Definition tr|A7PUT1|A7PUT1_VITVI Chromosome chr4 scaffold_32, whole genome shotgun sequence OS=Vitis vinifera
Align length 57
Score (bit) 95.5
E-value 2.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953609|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_D17, 5'
         (563 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PUT1|A7PUT1_VITVI Chromosome chr4 scaffold_32, whole genome...    96   2e-18
tr|A9NZI3|A9NZI3_PICSI Putative uncharacterized protein OS=Picea...    92   3e-17
tr|Q6K2P3|Q6K2P3_ORYSJ Os09g0327400 protein OS=Oryza sativa subs...    91   6e-17
tr|B7FK87|B7FK87_MEDTR Putative uncharacterized protein OS=Medic...    88   4e-16
tr|A4RVK9|A4RVK9_OSTLU Predicted protein OS=Ostreococcus lucimar...    64   4e-16
tr|Q9FJY6|Q9FJY6_ARATH Apospory-associated protein C-like OS=Ara...    87   6e-16
tr|B8A1H0|B8A1H0_MAIZE Putative uncharacterized protein OS=Zea m...    86   2e-15
tr|B4FX85|B4FX85_MAIZE Putative uncharacterized protein OS=Zea m...    86   2e-15
tr|A4RRV8|A4RRV8_OSTLU Predicted protein OS=Ostreococcus lucimar...    59   3e-15
tr|A9U353|A9U353_PHYPA Predicted protein OS=Physcomitrella paten...    82   2e-14
tr|A9RQG4|A9RQG4_PHYPA Predicted protein OS=Physcomitrella paten...    82   2e-14
tr|A3BXI4|A3BXI4_ORYSJ Putative uncharacterized protein OS=Oryza...    82   2e-14
tr|A2YZX3|A2YZX3_ORYSI Putative uncharacterized protein OS=Oryza...    82   2e-14
tr|A7Q6C4|A7Q6C4_VITVI Chromosome chr11 scaffold_56, whole genom...    57   3e-11
tr|Q9M6D7|Q9M6D7_CHLRE Apospory-associated protein C OS=Chlamydo...    72   3e-11
tr|A8J3Q5|A8J3Q5_CHLRE Predicted protein OS=Chlamydomonas reinha...    72   3e-11
tr|Q1WLY4|Q1WLY4_CHLIN Apospory-associated protein C (Fragment) ...    71   5e-11
tr|A9TTU2|A9TTU2_PHYPA Predicted protein OS=Physcomitrella paten...    52   8e-10
tr|B6T6S5|B6T6S5_MAIZE Apospory-associated protein C OS=Zea mays...    51   1e-09
tr|Q01BE8|Q01BE8_OSTTA Apospory-associated protein C; APOC (ISS)...    66   1e-09
tr|B8A312|B8A312_MAIZE Putative uncharacterized protein OS=Zea m...    55   2e-09
tr|Q6Z3M0|Q6Z3M0_ORYSJ cDNA, clone: J065013I20, full insert sequ...    50   2e-09
tr|B8BC79|B8BC79_ORYSI Putative uncharacterized protein OS=Oryza...    50   2e-09
tr|B6TB26|B6TB26_MAIZE Apospory-associated protein C OS=Zea mays...    50   2e-09
tr|B4FQ84|B4FQ84_MAIZE Putative uncharacterized protein OS=Zea m...    50   2e-09
tr|A9RR40|A9RR40_PHYPA Predicted protein OS=Physcomitrella paten...    50   2e-09
tr|B8ATT3|B8ATT3_ORYSI Putative uncharacterized protein OS=Oryza...    52   3e-09
tr|Q0JAE5|Q0JAE5_ORYSJ Os04g0603000 protein OS=Oryza sativa subs...    52   3e-09
tr|A3AX48|A3AX48_ORYSJ Putative uncharacterized protein OS=Oryza...    52   3e-09
tr|Q7XSR8|Q7XSR8_ORYSJ OSJNBa0041A02.19 protein OS=Oryza sativa ...    52   3e-09

>tr|A7PUT1|A7PUT1_VITVI Chromosome chr4 scaffold_32, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024909001
           PE=4 SV=1
          Length = 278

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 44/57 (77%), Positives = 50/57 (87%)
 Frame = +1

Query: 343 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGISTLF 513
           LPKLVLT + GS+AEIY+FG CVTSW+ +SGKDLLFVRPDA+FNGQKPISGGI   F
Sbjct: 16  LPKLVLTSTHGSEAEIYLFGGCVTSWKAASGKDLLFVRPDAVFNGQKPISGGIPHCF 72



 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = +2

Query: 476 GKNPLVEEFPHCFPQFGPGPIQQHGFARN 562
           G+ P+    PHCFPQFGPGP+QQHGFARN
Sbjct: 60  GQKPISGGIPHCFPQFGPGPMQQHGFARN 88


>tr|A9NZI3|A9NZI3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 359

 Score = 91.7 bits (226), Expect = 3e-17
 Identities = 43/77 (55%), Positives = 53/77 (68%)
 Frame = +1

Query: 283 ETLQSQINTXXXXXXXXXXXLPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPD 462
           E L  +I             LPKLVL  + GS+AEIY+FG C++SW++ +GKDLLFVRPD
Sbjct: 77  EKLNQEIGCLGVKVEEGEGKLPKLVLKSNGGSEAEIYLFGGCISSWKIPNGKDLLFVRPD 136

Query: 463 ALFNGQKPISGGISTLF 513
           A+FNGQKPISGGI   F
Sbjct: 137 AVFNGQKPISGGIPHCF 153



 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 21/29 (72%), Positives = 23/29 (79%)
 Frame = +2

Query: 476 GKNPLVEEFPHCFPQFGPGPIQQHGFARN 562
           G+ P+    PHCFPQFGPG IQQHGFARN
Sbjct: 141 GQKPISGGIPHCFPQFGPGLIQQHGFARN 169


>tr|Q6K2P3|Q6K2P3_ORYSJ Os09g0327400 protein OS=Oryza sativa subsp.
           japonica GN=P0706E03.9 PE=2 SV=1
          Length = 319

 Score = 90.5 bits (223), Expect = 6e-17
 Identities = 42/57 (73%), Positives = 48/57 (84%)
 Frame = +1

Query: 343 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGISTLF 513
           LPK+ L    GS+AEIY+FGACVTSW++ SGKDLLFVRPDA+FNGQKPISGGI   F
Sbjct: 57  LPKIDLKSPHGSEAEIYLFGACVTSWKVPSGKDLLFVRPDAVFNGQKPISGGIPHCF 113



 Score = 51.6 bits (122), Expect = 3e-05
 Identities = 20/29 (68%), Positives = 23/29 (79%)
 Frame = +2

Query: 476 GKNPLVEEFPHCFPQFGPGPIQQHGFARN 562
           G+ P+    PHCFPQFGPG +QQHGFARN
Sbjct: 101 GQKPISGGIPHCFPQFGPGTMQQHGFARN 129


>tr|B7FK87|B7FK87_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 255

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 39/57 (68%), Positives = 48/57 (84%)
 Frame = +1

Query: 343 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGISTLF 513
           LPKLVLT  +GS+AEIY+FG C+TSW++ +GKDLLFVRPDA+FN +KPI GGI   F
Sbjct: 50  LPKLVLTSPAGSEAEIYLFGGCITSWKVPNGKDLLFVRPDAVFNKKKPIGGGIPHCF 106



 Score = 51.6 bits (122), Expect = 3e-05
 Identities = 21/28 (75%), Positives = 22/28 (78%)
 Frame = +2

Query: 479 KNPLVEEFPHCFPQFGPGPIQQHGFARN 562
           K P+    PHCFPQFGPG IQQHGFARN
Sbjct: 95  KKPIGGGIPHCFPQFGPGTIQQHGFARN 122


>tr|A4RVK9|A4RVK9_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_86923 PE=4 SV=1
          Length = 348

 Score = 63.9 bits (154), Expect(2) = 4e-16
 Identities = 29/57 (50%), Positives = 38/57 (66%)
 Frame = +1

Query: 343 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGISTLF 513
           LP  +LT  +GS + +Y+FGA VTSW   SG ++L+VRPDA F+  KPI GG    F
Sbjct: 65  LPTALLTHKNGSTSRVYLFGATVTSWTQPSGDEVLYVRPDAAFDKTKPIGGGAPLCF 121



 Score = 43.5 bits (101), Expect(2) = 4e-16
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +2

Query: 503 PHCFPQFGPGPIQQHGFARN 562
           P CFPQFGPG +QQHGFARN
Sbjct: 118 PLCFPQFGPGAMQQHGFARN 137


>tr|Q9FJY6|Q9FJY6_ARATH Apospory-associated protein C-like
           OS=Arabidopsis thaliana GN=At5g66530 PE=1 SV=1
          Length = 307

 Score = 87.0 bits (214), Expect = 6e-16
 Identities = 40/57 (70%), Positives = 47/57 (82%)
 Frame = +1

Query: 343 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGISTLF 513
           LPKLVLT    S+AEIY+FG C+TSW+++SGKDLLFVRPDA+FN  KPISGGI   F
Sbjct: 45  LPKLVLTSPQNSEAEIYLFGGCITSWKVASGKDLLFVRPDAVFNKIKPISGGIPHCF 101



 Score = 47.8 bits (112), Expect = 4e-04
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +2

Query: 485 PLVEEFPHCFPQFGPGPIQQHGFARN 562
           P+    PHCFPQFGPG IQQHGF RN
Sbjct: 92  PISGGIPHCFPQFGPGLIQQHGFGRN 117


>tr|B8A1H0|B8A1H0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 315

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 40/57 (70%), Positives = 48/57 (84%)
 Frame = +1

Query: 343 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGISTLF 513
           LPK+ L    GS+AEIY+FGACVTS+++ +GKDLLFVRPDA+FNGQKPISGGI   F
Sbjct: 53  LPKIDLKSPHGSEAEIYLFGACVTSFKVPNGKDLLFVRPDAVFNGQKPISGGIPHCF 109



 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = +2

Query: 476 GKNPLVEEFPHCFPQFGPGPIQQHGFARN 562
           G+ P+    PHCFPQFGPGP+QQHGFARN
Sbjct: 97  GQKPISGGIPHCFPQFGPGPMQQHGFARN 125


>tr|B4FX85|B4FX85_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 129

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 40/57 (70%), Positives = 48/57 (84%)
 Frame = +1

Query: 343 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGISTLF 513
           LPK+ L    GS+AEIY+FGACVTS+++ +GKDLLFVRPDA+FNGQKPISGGI   F
Sbjct: 53  LPKIDLKSPHGSEAEIYLFGACVTSFKVPNGKDLLFVRPDAVFNGQKPISGGIPHCF 109



 Score = 41.2 bits (95), Expect = 0.039
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +2

Query: 476 GKNPLVEEFPHCFPQFGPGPIQQ 544
           G+ P+    PHCFPQFGPGP+QQ
Sbjct: 97  GQKPISGGIPHCFPQFGPGPMQQ 119


>tr|A4RRV8|A4RRV8_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_39789 PE=4 SV=1
          Length = 301

 Score = 59.3 bits (142), Expect(2) = 3e-15
 Identities = 27/53 (50%), Positives = 38/53 (71%)
 Frame = +1

Query: 343 LPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPDALFNGQKPISGGI 501
           L  + LT + GS A++Y+FG  VTS++   G D+L+VRPDA F+  KPISGG+
Sbjct: 46  LDTVKLTAADGSTADVYLFGGVVTSFKPKGGDDVLYVRPDAKFDKSKPISGGL 98



 Score = 45.4 bits (106), Expect(2) = 3e-15
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = +2

Query: 485 PLVEEFPHCFPQFGPGPIQQHGFARN 562
           P+    PHC+PQFGPG IQ HGFARN
Sbjct: 93  PISGGLPHCWPQFGPGAIQVHGFARN 118


>tr|A9U353|A9U353_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155277 PE=4 SV=1
          Length = 315

 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 38/77 (49%), Positives = 50/77 (64%)
 Frame = +1

Query: 283 ETLQSQINTXXXXXXXXXXXLPKLVLTESSGSQAEIYVFGACVTSWRLSSGKDLLFVRPD 462
           E L  +  T           L K+VL+   GS+AE+Y++G CVTSW+ + GKDLLFVRPD
Sbjct: 33  ENLNEKYGTEGVKVQSGEGGLTKVVLSGRDGSEAEVYLYGGCVTSWKAAGGKDLLFVRPD 92

Query: 463 ALFNGQKPISGGISTLF 513
           A+F G+KPISGG+   F
Sbjct: 93  AVFTGKKPISGGLPHCF 109



 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 23/30 (76%), Positives = 24/30 (80%)
 Frame = +2

Query: 473 TGKNPLVEEFPHCFPQFGPGPIQQHGFARN 562
           TGK P+    PHCFPQFGPG IQQHGFARN
Sbjct: 96  TGKKPISGGLPHCFPQFGPGVIQQHGFARN 125