DK953618
Clone id TST39A01NGRL0018_E02
Library
Length 637
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_E02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AGCGAAGTAAGCTTTTGCTTTCTCTTCAGAAATTGAACGTGGACGAGACGGCAGGCTGAG
CGATCGCAATGGACATCGTTTATCCCAACCCGGGTTCCACTTCTTCCTTCAACACCAGGC
AACAGCAGCAGCATCAACAGCCGCGTTATCCCTATCCGCAACTCGCCCAGCCAGTGGGAC
CTCCGTATGGCCGCCCTCCTCCGCCTGTCCCTTCCAACCCTTCAGCTCGTACTGGTATCA
GAGTAGCACTAAAACCTGAGTATCGATTGGCACCTCCGCCCGAGCTTTTGCCCCTGATGG
AGGACATACCCCAGAGCACTTTCCAGTTTGACTTTGATTTGGAAAGAAAAATTTTGGAAG
AATCTAGAAAGGAGGGCAGCAGTTTCATAGGATCATTACGGAGGCCATCGTCCTTGAGCA
GAGTTGCTGATGCAGCTGGCACGGCTGCACAAGAAGACCCTGTTGTGGCCAAGTATACTT
CAATGGGTCTGAACAAGGAAGCTGTCGTACTGGCAATTGCAACTTATGGAGATGTTCAGA
CCAAGGTTGTTGATTTCGTAGCATCCTATGATGTATTGCGAGAAAATGGGGTTTGAGCCT
GATAAGATTGCAGGTGCTCTCGCAATGTTTGATAACG
■■Homology search results ■■ -
sp_hit_id Q5F7E0
Definition sp|Q5F7E0|HIS1_NEIG1 ATP phosphoribosyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)
Align length 58
Score (bit) 31.2
E-value 4.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953618|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_E02, 5'
(637 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5F7E0|HIS1_NEIG1 ATP phosphoribosyltransferase OS=Neisseria ... 31 4.7
sp|Q8A5W2|G6PI_BACTN Glucose-6-phosphate isomerase OS=Bacteroide... 31 6.1

>sp|Q5F7E0|HIS1_NEIG1 ATP phosphoribosyltransferase OS=Neisseria
gonorrhoeae (strain ATCC 700825 / FA 1090) GN=hisG PE=3
SV=1
Length = 221

Score = 31.2 bits (69), Expect = 4.7
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3

Query: 432 AAGTAAQEDPVVAKYTSMGLNKEAVVLAIATYGDVQTKV----VDF-VASYDVLRENG 590
AAG A E+P ++ +G N E + L I DV T V DF +A DVL E+G
Sbjct: 25 AAGIAPTEEPEKSRKLIIGTNHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHG 82


>sp|Q8A5W2|G6PI_BACTN Glucose-6-phosphate isomerase OS=Bacteroides
thetaiotaomicron GN=pgi PE=3 SV=1
Length = 445

Score = 30.8 bits (68), Expect = 6.1
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +3

Query: 315 STFQFDFDLERKILEESRKEGSSFIGSLRRPSSLSR--VADAAGTAAQ-----EDPVVAK 473
S ++ + +++LE+ EG+ F+G L PSS+S+ +AD TA E +VA
Sbjct: 19 SAYEAEVKAAQEMLEKGTGEGNDFLGWLHLPSSISKEHLADLNATAKVLRDNCEVVIVAG 78

Query: 474 YTSMGLNKEAVVLAIA 521
L AV+ A++
Sbjct: 79 IGGSYLGARAVIEALS 94


tr_hit_id A5APR3
Definition tr|A5APR3|A5APR3_VITVI Putative uncharacterized protein (Chromosome undetermined scaffold_171, whole genome shotgun sequence) OS=Vitis vinifera
Align length 121
Score (bit) 102.0
E-value 1.0e-21
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953618|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_E02, 5'
(637 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5APR3|A5APR3_VITVI Putative uncharacterized protein (Chromos... 102 1e-21
tr|A9NQQ1|A9NQQ1_PICSI Putative uncharacterized protein OS=Picea... 100 2e-21
tr|Q93VW9|Q93VW9_ARATH AT5g53330/K19E1_13 OS=Arabidopsis thalian... 91 2e-18
tr|Q8LG11|Q8LG11_ARATH Proline-rich cell wall protein-like OS=Ar... 91 5e-18
tr|B6TN35|B6TN35_MAIZE Proline-rich cell wall protein-like OS=Ze... 94 9e-18
tr|A9SZ24|A9SZ24_PHYPA Predicted protein OS=Physcomitrella paten... 89 2e-17
tr|Q5WA93|Q5WA93_ORYSJ Os06g0160400 protein OS=Oryza sativa subs... 89 2e-16
tr|B8B397|B8B397_ORYSI Putative uncharacterized protein OS=Oryza... 88 4e-16
tr|A3B8L8|A3B8L8_ORYSJ Putative uncharacterized protein OS=Oryza... 75 3e-12
tr|Q9FK09|Q9FK09_ARATH Proline-rich cell wall protein-like OS=Ar... 50 9e-05
tr|A4H7C8|A4H7C8_LEIBR Putative uncharacterized protein OS=Leish... 37 1.3
tr|Q5XG07|Q5XG07_XENLA LOC495242 protein OS=Xenopus laevis GN=ro... 34 6.5

>tr|A5APR3|A5APR3_VITVI Putative uncharacterized protein (Chromosome
undetermined scaffold_171, whole genome shotgun
sequence) OS=Vitis vinifera GN=GSVIVT00006488001 PE=4
SV=1
Length = 221

Score = 102 bits (254), Expect(2) = 1e-21
Identities = 56/121 (46%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Frame = +3

Query: 234 GIRVALKPEYRXXXXXXXXXXMEDIPQSTFQFDFDLERKILEESRKEGSSF--IGSLRRP 407
GIRV +KPE+R + +IP+STFQFDFDLE+KIL E+ K+ ++ +G P
Sbjct: 74 GIRVVIKPEFRISPPPQLSPQVGEIPRSTFQFDFDLEKKILAEAEKDSQNWSRLGLENLP 133

Query: 408 SSLSRVADAAGTAAQEDPVVAKYTSMGLNKEAVVLAIATYGDVQTKVVDFVASYDVLREN 587
S + G+ A DPVV+KY + GL++EAV LA+A YGD +TKV +F Y +LRE
Sbjct: 134 SKALESTPSMGSTA--DPVVSKYIASGLSREAVPLAVANYGDNETKVREFTNGYTLLREM 191

Query: 588 G 590
G
Sbjct: 192 G 192



Score = 23.9 bits (50), Expect(2) = 1e-21
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1

Query: 583 KMGFEPDKIAGALAMFDN 636
+MGF +A AL M+DN
Sbjct: 190 EMGFSSSNVAEALVMYDN 207


>tr|A9NQQ1|A9NQQ1_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 231

Score = 100 bits (250), Expect(2) = 2e-21
Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
Frame = +3

Query: 231 TGIRVALKPEYRXXXXXXXXXXMEDIPQSTFQFDFDLERKILEESRKEGSSFIGSLRRPS 410
TGIRVA+KPEYR + +I +STFQFDFD ERKIL E+ K+ ++ +
Sbjct: 80 TGIRVAIKPEYRITPPPQLSPQIGEIRRSTFQFDFDFERKILAEAEKDNQNWSRIASENA 139

Query: 411 SLSRVADAAGTA---AQEDPVVAKYTSMGLNKEAVVLAIATYGDVQTKVVDFVASYDVLR 581
S + + + T+ + +D V+ KY + G N+EAV +A+AT+GD Q KV +FV SY+ LR
Sbjct: 140 SRPKSGETSSTSSLGSVDDQVINKYVATGFNREAVSIAVATFGDNQNKVREFVTSYNQLR 199

Query: 582 ENG 590
E G
Sbjct: 200 EMG 202



Score = 24.6 bits (52), Expect(2) = 2e-21
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1

Query: 583 KMGFEPDKIAGALAMFDN 636
+MGF ++G LAM+DN
Sbjct: 200 EMGFPSHTVSGVLAMYDN 217


>tr|Q93VW9|Q93VW9_ARATH AT5g53330/K19E1_13 OS=Arabidopsis thaliana
PE=2 SV=1
Length = 221

Score = 91.3 bits (225), Expect(2) = 2e-18
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Frame = +3

Query: 234 GIRVALKPEYRXXXXXXXXXXMEDIPQSTFQFDFDLERKILEESRKEGSSF--IGSLRRP 407
GIRV LKPEYR + DI +S+FQFDF LERK+L E+ K+ + GS P
Sbjct: 71 GIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERKVLAEAEKDNPDWSKFGSENPP 130

Query: 408 SSLSRVADAA-GTAAQEDPVVAKYTSMGLNKEAVVLAIATYGDVQTKVVDFVASYDVLRE 584
+ + ++ G D VV KYT+ GLN+EAV +A+A YGD TKV +F + +RE
Sbjct: 131 AKFHEPSPSSVGQMQGVDHVVMKYTASGLNREAVNIAVANYGDNPTKVQEFANGFTAIRE 190

Query: 585 NG 590
G
Sbjct: 191 MG 192



Score = 24.3 bits (51), Expect(2) = 2e-18
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1

Query: 583 KMGFEPDKIAGALAMFDN 636
+MGF + +A AL MFDN
Sbjct: 190 EMGFPTNAVADALFMFDN 207


>tr|Q8LG11|Q8LG11_ARATH Proline-rich cell wall protein-like
OS=Arabidopsis thaliana PE=2 SV=1
Length = 221

Score = 91.3 bits (225), Expect(2) = 5e-18
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Frame = +3

Query: 234 GIRVALKPEYRXXXXXXXXXXMEDIPQSTFQFDFDLERKILEESRKEGSSF--IGSLRRP 407
GIRV LKPEYR + DI +S+FQFDF LERK+L E+ K+ + GS P
Sbjct: 71 GIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERKVLAEAEKDNPDWSKFGSENPP 130

Query: 408 SSLSRVADAA-GTAAQEDPVVAKYTSMGLNKEAVVLAIATYGDVQTKVVDFVASYDVLRE 584
+ + ++ G D VV KYT+ GLN+EAV +A+A YGD TKV +F + +RE
Sbjct: 131 AKFHEPSPSSVGQMQGVDHVVMKYTASGLNREAVNIAVANYGDNPTKVQEFANGFTAIRE 190

Query: 585 NG 590
G
Sbjct: 191 MG 192



Score = 22.7 bits (47), Expect(2) = 5e-18
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1

Query: 583 KMGFEPDKIAGALAMFDN 636
+MGF + +A AL MF+N
Sbjct: 190 EMGFPTNAVADALFMFEN 207


>tr|B6TN35|B6TN35_MAIZE Proline-rich cell wall protein-like OS=Zea
mays PE=2 SV=1
Length = 240

Score = 93.6 bits (231), Expect = 9e-18
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +3

Query: 225 ARTGIRVALKPEYRXXXXXXXXXXMEDIPQSTFQFDFDLERKILEESRKEGSSFIGSLRR 404
++ GI+VA+KPE+R M +IP STF FDF+ ER IL E+ KE ++ +
Sbjct: 88 SKVGIQVAIKPEFRITPPPQLPPEMVEIPCSTFNFDFEYERMILAEAEKENPNWTKFVVE 147

Query: 405 PSSLSRVADAAGTAAQE--DPVVAKYTSMGLNKEAVVLAIATYGDVQTKVVDFVASYDVL 578
+ V A A+ DPVV KY SMGL ++AV A+ YGD TKV +FV SY +L
Sbjct: 148 RQAAPLVPQQARPASSGSGDPVVDKYVSMGLGRQAVSFAVLNYGDNPTKVKEFVKSYSIL 207

Query: 579 RENG 590
E G
Sbjct: 208 HEMG 211


>tr|A9SZ24|A9SZ24_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_234548 PE=4 SV=1
Length = 208

Score = 89.4 bits (220), Expect(2) = 2e-17
Identities = 50/120 (41%), Positives = 70/120 (58%)
Frame = +3

Query: 231 TGIRVALKPEYRXXXXXXXXXXMEDIPQSTFQFDFDLERKILEESRKEGSSFIGSLRRPS 410
+ I+V +KP YR ++P+S FQF+FDLER+IL E+ + +F +
Sbjct: 65 SAIKVTIKPMYRLGPPAQLRVQSREVPRSLFQFEFDLERRILAEAEQGNLNFRAG--SGA 122

Query: 411 SLSRVADAAGTAAQEDPVVAKYTSMGLNKEAVVLAIATYGDVQTKVVDFVASYDVLRENG 590
+LS+ A A ED VAKY +MG NKEAV A+ TYGD Q KV+DF ++ +RE G
Sbjct: 123 TLSQSNSEADLAEVEDATVAKYLAMGHNKEAVQYALQTYGDDQNKVLDFCPPFNRIREMG 182



Score = 22.7 bits (47), Expect(2) = 2e-17
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1

Query: 565 PMMYCEKMGFEPDKIAGALAMFDN 636
P +MGF D++A ALA +N
Sbjct: 174 PFNRIREMGFAADRVAKALASCNN 197


>tr|Q5WA93|Q5WA93_ORYSJ Os06g0160400 protein OS=Oryza sativa subsp.
japonica GN=P0681F10.7 PE=2 SV=1
Length = 231

Score = 89.0 bits (219), Expect = 2e-16
Identities = 51/128 (39%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Frame = +3

Query: 234 GIRVALKPEYRXXXXXXXXXXMEDIPQSTFQFDFDLERKILEESRKEGSSFIGSL----- 398
GI+V +KP YR + +IP+STF FDF+ ERKIL E+ KE ++ +
Sbjct: 76 GIQVVIKPAYRITPPPQLPPQLTEIPRSTFNFDFEYERKILAEAEKENPNWSKFVIESQP 135

Query: 399 ----RRPSSLSRVADAAGTAAQEDPVVAKYTSMGLNKEAVVLAIATYGDVQTKVVDFVAS 566
+ P A DPVV KY SMGL +EAV A+ YGD KV +FV S
Sbjct: 136 PPPPQPPRGPKLTTPTTSVATPGDPVVDKYISMGLGREAVSFAVLNYGDNPAKVKEFVKS 195

Query: 567 YDVLRENG 590
Y+ L E G
Sbjct: 196 YNALHEMG 203


>tr|B8B397|B8B397_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_21768 PE=4 SV=1
Length = 284

Score = 88.2 bits (217), Expect = 4e-16
Identities = 50/128 (39%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Frame = +3

Query: 234 GIRVALKPEYRXXXXXXXXXXMEDIPQSTFQFDFDLERKILEESRKEGSSFIGSL----- 398
GI+V +KP YR + +IP+STF FDF+ ERKIL E+ KE ++ +
Sbjct: 129 GIQVVIKPAYRITPPPQLPPQLTEIPRSTFNFDFEYERKILAEAEKENPNWSKFVIESQP 188

Query: 399 ----RRPSSLSRVADAAGTAAQEDPVVAKYTSMGLNKEAVVLAIATYGDVQTKVVDFVAS 566
+ P A DP+V KY SMGL +EAV A+ YGD KV +FV S
Sbjct: 189 SPPPQPPRGPKLTTPPTSVATPGDPIVDKYISMGLGREAVSFAVLNYGDNPAKVKEFVKS 248

Query: 567 YDVLRENG 590
Y+ L E G
Sbjct: 249 YNALHEMG 256


>tr|A3B8L8|A3B8L8_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_019390 PE=4 SV=1
Length = 262

Score = 75.1 bits (183), Expect = 3e-12
Identities = 46/117 (39%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Frame = +3

Query: 234 GIRVALKPEYRXXXXXXXXXXMEDIPQSTFQFDFDLERKILEESRKEG---SSFI----- 389
GI+V +KP YR + +IP+STF FDF+ ERKIL E+ KE S F+
Sbjct: 76 GIQVVIKPAYRITPPPQLPPQLTEIPRSTFNFDFEYERKILAEAEKENPNWSKFVIESQP 135

Query: 390 -GSLRRPSSLSRVADAAGTAAQEDPVVAKYTSMGLNKEAVVLAIATYGDVQTKVVDF 557
+ P A DPVV KY SMGL +EAV A+ YGD K F
Sbjct: 136 PPPPQPPRGPKLTTPTTSVATPGDPVVDKYISMGLGREAVSFAVLNYGDNPAKACFF 192


>tr|Q9FK09|Q9FK09_ARATH Proline-rich cell wall protein-like
OS=Arabidopsis thaliana PE=4 SV=1
Length = 196

Score = 50.4 bits (119), Expect = 9e-05
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = +3

Query: 234 GIRVALKPEYRXXXXXXXXXXMEDIPQSTFQFDFDLERKILEESRKE 374
GIRV LKPEYR + DI +S+FQFDF LERK+L E+ K+
Sbjct: 71 GIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERKVLAEAEKD 117