DK953621 |
Clone id |
TST39A01NGRL0018_E05 |
Library |
TST39 |
Length |
565 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_E05. 5' end sequence. |
Accession |
DK953621 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL30Contig1 |
Sequence |
TCGAGATCATCATCTTTTCGCAGGGGAAAGAGAAAGCTTGGTTGCAGAGACCGTCGGGAC GCCATGGCTGCAGCTACCGCATCCTCCCTCACGGCCGCCTGTGTCTCCTCCCTCTCTGCC CACTCCTCCACCTCCCCTGCCCCAGATCACATCAATTGCTCCTCTCCTTTCGCCAAATTC TCGGGTCTCAAGCTAGCCTCCTCCCCGCTTCCTTCCCACCACACCCAAGAGAAGAAGAAG AGAAGCAGTGGCAGCAGGAAGGCGCATCATGTCACTGCAACGGCAGCCGTGGAGGCTCCC CCCAAGACCGATGTCTCGTTGGTGGAGAAGAGCATCAATACTATCCGATTCTTGGCCGTT GATGCAGTTGAGAAGGCTAACTCTGGACACCCAGGTCTTCCCATGGGGTGTGCTCCGATG GGCCACATTCTGTATGACGAGATCATGAGATACAACCCAAAAAATCCCTATTGGTTCAAT CGCGACAGGTTCGTCCTTTCTGCGGGCCATGGTTGCATGTTGCAGTATGCACTTCTTCAT CTTGCCGGCTACGACAGCGTCCAGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43848 |
Definition |
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum |
Align length |
135 |
Score (bit) |
181.0 |
E-value |
2.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953621|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_E05, 5' (565 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 181 2e-45 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 174 3e-43 sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 172 1e-42 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 164 3e-40 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 150 3e-36 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 138 2e-32 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 115 2e-25 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 113 6e-25 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 112 1e-24 sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT... 111 2e-24 sp|O83571|TKT_TREPA Transketolase OS=Treponema pallidum GN=tkt P... 109 1e-23 sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneu... 108 2e-23 sp|Q9URM2|TKT_SCHPO Probable transketolase OS=Schizosaccharomyce... 105 1e-22 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 105 1e-22 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 104 3e-22 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 104 3e-22 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 104 3e-22 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 104 3e-22 sp|P21725|TKTC_RALEH Transketolase, chromosomal OS=Ralstonia eut... 104 3e-22 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 103 8e-22 sp|Q89AY2|TKT_BUCBP Transketolase OS=Buchnera aphidicola subsp. ... 102 1e-21 sp|P21726|TKTP_RALEH Transketolase, plasmid OS=Ralstonia eutroph... 102 2e-21 sp|P34736|TKT_PICST Transketolase OS=Pichia stipitis GN=TKT PE=3... 100 4e-21 sp|P33570|TKT2_ECOLI Transketolase 2 OS=Escherichia coli (strain... 100 4e-21 sp|Q8CPC7|TKT_STAES Transketolase OS=Staphylococcus epidermidis ... 100 5e-21 sp|Q5HPJ9|TKT_STAEQ Transketolase OS=Staphylococcus epidermidis ... 100 5e-21 sp|P27302|TKT1_ECOLI Transketolase 1 OS=Escherichia coli (strain... 100 5e-21 sp|P43757|TKT_HAEIN Transketolase OS=Haemophilus influenzae GN=t... 100 7e-21 sp|P33315|TKT2_YEAST Transketolase 2 OS=Saccharomyces cerevisiae... 100 9e-21 sp|Q8KA26|TKT_BUCAP Transketolase OS=Buchnera aphidicola subsp. ... 99 1e-20
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 181 bits (459), Expect = 2e-45 Identities = 90/135 (66%), Positives = 103/135 (76%) Frame = +1
Query: 160 SSPFAKFSGLKLASSPLPSHHTQEKKKRSSGSRXXXXXXXXXXXXXXXXTDVSLVEKSIN 339 S F+ FSGLK S+P S H + ++ ++ TD ++VEKS+N Sbjct: 30 SLSFSTFSGLK--STPFTSSHRRILPS-TTVTKQQFSVRASAAVETLEKTDAAIVEKSVN 86
Query: 340 TIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGCM 519 TIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRDRFVLSAGHGCM Sbjct: 87 TIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCM 146
Query: 520 LQYALLHLAGYDSVQ 564 LQYALLHLAGYDSVQ Sbjct: 147 LQYALLHLAGYDSVQ 161
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 174 bits (441), Expect = 3e-43 Identities = 81/86 (94%), Positives = 84/86 (97%), Gaps = 1/86 (1%) Frame = +1
Query: 307 TDVS-LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 483 TD+ LVEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR Sbjct: 75 TDIDQLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 134
Query: 484 DRFVLSAGHGCMLQYALLHLAGYDSV 561 DRFVLSAGHGCMLQYALLHLAGYDSV Sbjct: 135 DRFVLSAGHGCMLQYALLHLAGYDSV 160
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 172 bits (435), Expect = 1e-42 Identities = 76/82 (92%), Positives = 82/82 (100%) Frame = +1
Query: 319 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 498 L+EKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGH+LYDE+MRYNPKNPYWFNRDRFVL Sbjct: 15 LLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVL 74
Query: 499 SAGHGCMLQYALLHLAGYDSVQ 564 SAGHGCMLQYALLHLAGYDSV+ Sbjct: 75 SAGHGCMLQYALLHLAGYDSVK 96
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 164 bits (415), Expect = 3e-40 Identities = 72/82 (87%), Positives = 79/82 (96%) Frame = +1
Query: 319 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 498 LV KS+NTIRFLA+DAVEKA SGHPG+PMGCAPMGH+LYDE MR+NPKNPYWFNRDRFVL Sbjct: 13 LVSKSVNTIRFLAIDAVEKAKSGHPGMPMGCAPMGHVLYDEFMRFNPKNPYWFNRDRFVL 72
Query: 499 SAGHGCMLQYALLHLAGYDSVQ 564 SAGHGCMLQYALLHL+GYDSV+ Sbjct: 73 SAGHGCMLQYALLHLSGYDSVK 94
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 150 bits (380), Expect = 3e-36 Identities = 66/82 (80%), Positives = 74/82 (90%) Frame = +1
Query: 319 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 498 LV KS+NTIRFLA+DAVE SGHPG+PMGCAPMGH+L+DE M++NPKNPYWFNRDRFVL Sbjct: 17 LVVKSVNTIRFLAIDAVENVKSGHPGMPMGCAPMGHVLFDEFMKFNPKNPYWFNRDRFVL 76
Query: 499 SAGHGCMLQYALLHLAGYDSVQ 564 SAGHG ML Y LLHLAGYDSV+ Sbjct: 77 SAGHGAMLLYGLLHLAGYDSVK 98
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 138 bits (347), Expect = 2e-32 Identities = 65/82 (79%), Positives = 70/82 (85%) Frame = +1
Query: 316 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 495 SL E SIN IRFLAVDA+EKA SGHPGLPMG APM +L++ MRYNPKNP WFNRDRFV Sbjct: 7 SLEELSINAIRFLAVDAIEKAKSGHPGLPMGAAPMAFVLWNRFMRYNPKNPKWFNRDRFV 66
Query: 496 LSAGHGCMLQYALLHLAGYDSV 561 LSAGHG MLQYALL+L GYDSV Sbjct: 67 LSAGHGSMLQYALLYLTGYDSV 88
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 115 bits (288), Expect = 2e-25 Identities = 51/75 (68%), Positives = 61/75 (81%) Frame = +1
Query: 331 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 510 ++NTIR L++D+VEKANSGHPG+PMG APM L+ + M +NP NP W NRDRFVLSAGH Sbjct: 9 AVNTIRTLSIDSVEKANSGHPGMPMGAAPMAFCLWTKFMNHNPANPDWVNRDRFVLSAGH 68
Query: 511 GCMLQYALLHLAGYD 555 G ML Y+LLHL GYD Sbjct: 69 GSMLLYSLLHLTGYD 83
>sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2 Length = 667
Score = 113 bits (283), Expect = 6e-25 Identities = 49/80 (61%), Positives = 65/80 (81%) Frame = +1
Query: 316 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 495 ++ +KS+ TIR L++DA+EKANSGHPG+PMG APM + L+ + M +P NP WFNRDRFV Sbjct: 3 TIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFV 62
Query: 496 LSAGHGCMLQYALLHLAGYD 555 LSAGHG L Y++LHL+G+D Sbjct: 63 LSAGHGSALLYSMLHLSGFD 82
>sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=3 SV=1 Length = 689
Score = 112 bits (280), Expect = 1e-24 Identities = 49/83 (59%), Positives = 64/83 (77%) Frame = +1
Query: 307 TDVSLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRD 486 T + E INTIRFL+VD VE+A SGHPG+P+G + + ++LYD IM+YNPKNP WFNRD Sbjct: 29 TSKKIDELVINTIRFLSVDMVERAKSGHPGMPLGASHIVYLLYDRIMKYNPKNPNWFNRD 88
Query: 487 RFVLSAGHGCMLQYALLHLAGYD 555 RF+LSAGHG + YA ++ G+D Sbjct: 89 RFILSAGHGSAMLYAAFYMFGFD 111
>sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT PE=3 SV=2 Length = 668
Score = 111 bits (278), Expect = 2e-24 Identities = 48/79 (60%), Positives = 64/79 (81%) Frame = +1
Query: 325 EKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSA 504 ++ N IRFLA+DAVE ANSGHPGLPMG A + +L+ ++++Y+P P+W +RDRFVLSA Sbjct: 13 DRLANAIRFLAIDAVEAANSGHPGLPMGAADIATVLFTKVLKYDPSRPFWPDRDRFVLSA 72
Query: 505 GHGCMLQYALLHLAGYDSV 561 GHG ML Y++LHLAGY+ V Sbjct: 73 GHGSMLLYSVLHLAGYEKV 91
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P7Z7 |
Definition |
tr|A9P7Z7|A9P7Z7_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
129 |
Score (bit) |
182.0 |
E-value |
1.0e-44 |
Report |
|