| DK953628 |
| Clone id |
TST39A01NGRL0018_E12 |
| Library |
TST39 |
| Length |
626 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_E12. 5' end sequence. |
| Accession |
DK953628 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL384Contig1 |
| Sequence |
GGCCATAAAGCCCTAATATTAGGTATTCAGAGGTTGAAGATGATGATGCAGCCTGGAGCT
GGAGTTGGCCCTTCCCCAAATGGAGTAAACATAGATCCACAACAGCAGCAGCAATGGGCT
ATGGCGGCACCGATGCAGGGCATGGCAGGCATGCAGCCTCAACAGCTCTACGTGCAGTGT
AATGTGGCTCCAGGACCACAAAACGCCGACGATATTCGAACCCTATGGGTTGGAGATTTG
CAGTTTTGGATGGACGAGAACTACATTGCAAGCTGTTTTGCCCACACAGGAGAGGTCCTG
AATGTTAAGATTATCAGGAACAAGCAGACTATGGCATCTGAGGGCTATGGATTTGTCGAA
TTTGTGTCTCATACTTCAGCTGAAAGGATCTTGAACACCTATAATGGTGCTCCCATGCCA
CAGACAGAACAAGCTTTTAGGCTCAATTGGGCATCTTTTGGCATGGGAGAAAGGCGCATG
GAAGGTTCTGATCTTTCTATATTTGTGGGTGATCTTGCTGGAGATGTTACGGATCAAGTA
TTACAAGAGACATTCAAATCCCGCTATGCCTCAGTGAAGGGTGCCAGGGTTGTGACTGAC
ACTCTCACTGGGCGCTCGAAGGGCTA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9QZI7 |
| Definition |
sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1 OS=Rattus norvegicus |
| Align length |
138 |
| Score (bit) |
108.0 |
| E-value |
3.0e-23 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953628|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_E12, 5'
(626 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1 O... 108 3e-23
sp|Q80VC6|TSAP1_MOUSE tRNA selenocysteine 1-associated protein 1... 108 3e-23
sp|Q9NX07|TSAP1_HUMAN tRNA selenocysteine 1-associated protein 1... 108 3e-23
sp|Q1RMJ7|TSAP1_BOVIN tRNA selenocysteine 1-associated protein 1... 108 3e-23
sp|Q5R462|TSAP1_PONAB tRNA selenocysteine 1-associated protein 1... 106 9e-23
sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.0... 100 6e-21
sp|Q4KM14|TSAP1_DANRE tRNA selenocysteine 1-associated protein 1... 99 2e-20
sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator ... 97 9e-20
sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN... 75 3e-13
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P... 69 2e-11
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 P... 65 2e-10
sp|Q5R9Z6|ELAV2_PONAB ELAV-like protein 2 OS=Pongo abelii GN=ELA... 65 3e-10
sp|Q60899|ELAV2_MOUSE ELAV-like protein 2 OS=Mus musculus GN=Ela... 65 3e-10
sp|Q12926|ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapiens GN=ELA... 65 3e-10
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 64 5e-10
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor... 64 6e-10
sp|P52912|TIA1_MOUSE Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 P... 64 8e-10
sp|P31483|TIA1_HUMAN Nucleolysin TIA-1 isoform p40 OS=Homo sapie... 64 8e-10
sp|Q8CH84|ELAV2_RAT ELAV-like protein 2 OS=Rattus norvegicus GN=... 64 8e-10
sp|O09032|ELAV4_RAT ELAV-like protein 4 OS=Rattus norvegicus GN=... 63 1e-09
sp|Q61701|ELAV4_MOUSE ELAV-like protein 4 OS=Mus musculus GN=Ela... 63 1e-09
sp|P26378|ELAV4_HUMAN ELAV-like protein 4 OS=Homo sapiens GN=ELA... 63 1e-09
sp|P32588|PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-... 61 4e-09
sp|Q15717|ELAV1_HUMAN ELAV-like protein 1 OS=Homo sapiens GN=ELA... 61 4e-09
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 61 5e-09
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 61 5e-09
sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=... 61 5e-09
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ... 60 1e-08
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 59 2e-08
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 59 2e-08
>sp|Q9QZI7|TSAP1_RAT tRNA selenocysteine 1-associated protein 1
OS=Rattus norvegicus GN=Trnau1ap PE=1 SV=1
Length = 287
Score = 108 bits (269), Expect = 3e-23
Identities = 64/138 (46%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGE-VLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
+LW+GDL+ +MDEN+I+ FA GE V++VKIIRN+ T GY FVEF +AE+ L+
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 397 TYNGAPMPQTEQA--FRLNWASFGMGERRMEGSDLSIFVGDLAGDVTDQVLQETFKSRYA 570
NG P+P A F+LN+A++G ++ + S+FVGDL DV D +L E F Y
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 571 SVKGARVVTDTLTGRSKG 624
S +G +VV D TG SKG
Sbjct: 122 SCRGGKVVLDQ-TGVSKG 138
Score = 32.7 bits (73), Expect = 1.6
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHT 375
P N+ + +L+VGDL +D+ + F + QT S+GYGFV+F
Sbjct: 90 PDNSPEY-SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDEL 148
Query: 376 SAERILNTYNGA 411
+R L GA
Sbjct: 149 EQKRALTECQGA 160
>sp|Q80VC6|TSAP1_MOUSE tRNA selenocysteine 1-associated protein 1
OS=Mus musculus GN=Trnau1ap PE=1 SV=2
Length = 287
Score = 108 bits (269), Expect = 3e-23
Identities = 64/138 (46%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGE-VLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
+LW+GDL+ +MDEN+I+ FA GE V++VKIIRN+ T GY FVEF +AE+ L+
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 397 TYNGAPMPQTEQA--FRLNWASFGMGERRMEGSDLSIFVGDLAGDVTDQVLQETFKSRYA 570
NG P+P A F+LN+A++G ++ + S+FVGDL DV D +L E F Y
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 571 SVKGARVVTDTLTGRSKG 624
S +G +VV D TG SKG
Sbjct: 122 SCRGGKVVLDP-TGVSKG 138
Score = 30.4 bits (67), Expect = 7.7
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHT 375
P N+ + +L+VGDL +D+ + F + T S+GYGFV+F
Sbjct: 90 PDNSPEY-SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDPTGVSKGYGFVKFTDEL 148
Query: 376 SAERILNTYNGA 411
+R L GA
Sbjct: 149 EQKRALTECQGA 160
>sp|Q9NX07|TSAP1_HUMAN tRNA selenocysteine 1-associated protein 1
OS=Homo sapiens GN=TRNAU1AP PE=1 SV=1
Length = 287
Score = 108 bits (269), Expect = 3e-23
Identities = 64/138 (46%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGE-VLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
+LW+GDL+ +MDEN+I+ FA GE V++VKIIRN+ T GY FVEF +AE+ L+
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 397 TYNGAPMPQTEQA--FRLNWASFGMGERRMEGSDLSIFVGDLAGDVTDQVLQETFKSRYA 570
NG P+P A F+LN+A++G ++ + S+FVGDL DV D +L E F Y
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 571 SVKGARVVTDTLTGRSKG 624
S +G +VV D TG SKG
Sbjct: 122 SCRGGKVVLDQ-TGVSKG 138
Score = 32.7 bits (73), Expect = 1.6
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHT 375
P N+ + +L+VGDL +D+ + F + QT S+GYGFV+F
Sbjct: 90 PDNSPEY-SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDEL 148
Query: 376 SAERILNTYNGA 411
+R L GA
Sbjct: 149 EQKRALTECQGA 160
>sp|Q1RMJ7|TSAP1_BOVIN tRNA selenocysteine 1-associated protein 1
OS=Bos taurus GN=TRNAU1AP PE=2 SV=1
Length = 287
Score = 108 bits (269), Expect = 3e-23
Identities = 64/138 (46%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGE-VLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
+LW+GDL+ +MDEN+I+ FA GE V++VKIIRN+ T GY FVEF +AE+ L+
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 397 TYNGAPMPQTEQA--FRLNWASFGMGERRMEGSDLSIFVGDLAGDVTDQVLQETFKSRYA 570
NG P+P A F+LN+A++G ++ + S+FVGDL DV D +L E F Y
Sbjct: 64 KINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 571 SVKGARVVTDTLTGRSKG 624
S +G +VV D TG SKG
Sbjct: 122 SCRGGKVVLDQ-TGVSKG 138
Score = 32.7 bits (73), Expect = 1.6
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHT 375
P N+ + +L+VGDL +D+ + F + QT S+GYGFV+F
Sbjct: 90 PDNSPEY-SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDEL 148
Query: 376 SAERILNTYNGA 411
+R L GA
Sbjct: 149 EQKRALTECQGA 160
>sp|Q5R462|TSAP1_PONAB tRNA selenocysteine 1-associated protein 1
OS=Pongo abelii GN=TRNAU1AP PE=2 SV=1
Length = 287
Score = 106 bits (265), Expect = 9e-23
Identities = 63/138 (45%), Positives = 87/138 (63%), Gaps = 3/138 (2%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGE-VLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
+LW+GDL+ +MDEN+I+ FA GE V++VKIIRN+ T GY FVEF +AE+ L+
Sbjct: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
Query: 397 TYNGAPMPQTEQA--FRLNWASFGMGERRMEGSDLSIFVGDLAGDVTDQVLQETFKSRYA 570
NG P+P A F+LN+ ++G ++ + S+FVGDL DV D +L E F Y
Sbjct: 64 KINGKPLPGATPAKRFKLNYVTYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
Query: 571 SVKGARVVTDTLTGRSKG 624
S +G +VV D TG SKG
Sbjct: 122 SCRGGKVVLDQ-TGVSKG 138
Score = 32.7 bits (73), Expect = 1.6
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHT 375
P N+ + +L+VGDL +D+ + F + QT S+GYGFV+F
Sbjct: 90 PDNSPEY-SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDEL 148
Query: 376 SAERILNTYNGA 411
+R L GA
Sbjct: 149 EQKRALTECQGA 160
>sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c
OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2
Length = 473
Score = 100 bits (249), Expect = 6e-21
Identities = 57/144 (39%), Positives = 86/144 (59%), Gaps = 2/144 (1%)
Frame = +1
Query: 199 QNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTS 378
+N TLW+G+L+ W+ E +I + G+ + VK+IRN+ T + GY FVEF S
Sbjct: 87 ENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHE 146
Query: 379 AERILNTYNGAPMPQTEQAFRLNWAS-FGMGERRM-EGSDLSIFVGDLAGDVTDQVLQET 552
A + + N P+P T F+LNWAS G+ E+ + + S+ SIFVGDL+ +V + +
Sbjct: 147 ASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSL 205
Query: 553 FKSRYASVKGARVVTDTLTGRSKG 624
F SRY S K A+++TD T S+G
Sbjct: 206 FASRYNSCKSAKIMTDPQTNVSRG 229
Score = 46.6 bits (109), Expect = 1e-04
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 190 PGPQNADDIR-TLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFV 366
P PQ AD T++VG L ++ E + F + GE++ VKI K G GFV+FV
Sbjct: 293 PVPQFADTANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGK------GCGFVQFV 346
Query: 367 SHTSAERILNTYNGAPMPQTEQAFRLNW 450
+ SAE +N G P+ + RL+W
Sbjct: 347 NRQSAEIAINQLQGYPLGNSR--IRLSW 372
Score = 33.5 bits (75), Expect = 0.92
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHT-GEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
+++VGDL ++E + S FA + KI+ + QT S GYGFV F + L
Sbjct: 187 SIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALA 246
Query: 397 TYNG 408
G
Sbjct: 247 EMQG 250
>sp|Q4KM14|TSAP1_DANRE tRNA selenocysteine 1-associated protein 1
OS=Danio rerio GN=trnau1ap PE=2 SV=1
Length = 316
Score = 99.0 bits (245), Expect = 2e-20
Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 3/138 (2%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGEV-LNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
+LW+GDL +MDEN+I F+ GE VKII ++ T S GY FVE S +R +
Sbjct: 7 SLWMGDLDPYMDENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQ 66
Query: 397 TYNGAPMPQTE--QAFRLNWASFGMGERRMEGSDLSIFVGDLAGDVTDQVLQETFKSRYA 570
NG +P + + F+LN+A++G +R G + S+FVGDL +V D L + F ++
Sbjct: 67 RLNGKLVPGSNPPRKFKLNYATYG--KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLKKFP 124
Query: 571 SVKGARVVTDTLTGRSKG 624
S KGA+VVTD G S+G
Sbjct: 125 SCKGAKVVTDPY-GNSRG 141
>sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator
csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1
Length = 632
Score = 96.7 bits (239), Expect = 9e-20
Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 5/139 (3%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASE--GYGFVEFVSHTSAERIL 393
TLW+GDL+ WMD +I +A E +NVK++R+K + + Y FV+F S +AER L
Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145
Query: 394 NTYNGAPMPQTEQAFRLNWASFGMGERR---MEGSDLSIFVGDLAGDVTDQVLQETFKSR 564
YN +P F+LNWA+ G + + SIFVGDL D L TF+S
Sbjct: 146 MKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSI 205
Query: 565 YASVKGARVVTDTLTGRSK 621
Y S A+++ D +TG S+
Sbjct: 206 YPSCTSAKIIVDPVTGLSR 224
Score = 41.6 bits (96), Expect = 0.003
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILNT 399
T++VG L + E + CF G +LN+KI K G GFV++ ++AE+ +NT
Sbjct: 298 TVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGK------GCGFVQYSEKSAAEKAINT 351
Query: 400 YNGAPMPQTEQAFRLNW 450
GA + + RL W
Sbjct: 352 MQGALVGTSH--IRLAW 366
>sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae
GN=NAM8 PE=1 SV=2
Length = 523
Score = 75.1 bits (183), Expect = 3e-13
Identities = 55/152 (36%), Positives = 81/152 (53%), Gaps = 18/152 (11%)
Frame = +1
Query: 223 LWVGDLQFWMDENYIASCFAHTGEV-LNVKIIRN-------KQTMA---SEGYGFVEFVS 369
L++GDL D+N + +A GE +NV+++ N + +M ++GY FV+F S
Sbjct: 56 LYMGDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPS 115
Query: 370 HTSAERILNTYNGAPMPQ-TEQAFRLNWASFGMGERR------MEGSDLSIFVGDLAGDV 528
T A L NG +P + +LNWA+ G++ SIFVGDLA +V
Sbjct: 116 STHAANAL-LKNGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNV 174
Query: 529 TDQVLQETFKSRYASVKGARVVTDTLTGRSKG 624
T+ L E F +RYAS A++V D +TG SKG
Sbjct: 175 TESQLFELFINRYASTSHAKIVHDQVTGMSKG 206
Score = 32.0 bits (71), Expect = 2.7
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHT-GEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
+++VGDL + E+ + F + + KI+ ++ T S+GYGFV+F + + L+
Sbjct: 164 SIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALS 223
Query: 397 TYNG 408
G
Sbjct: 224 EMQG 227
Score = 31.2 bits (69), Expect = 4.5
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILNT 399
T+++G L + E+ + + F G ++ VKI K GFV++V SAE +
Sbjct: 314 TVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCC------GFVQYVDRLSAEAAIAG 367
Query: 400 YNGAPMPQTEQAFRLNW 450
G P+ + RL+W
Sbjct: 368 MQGFPIANSR--VRLSW 382
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1
SV=1
Length = 375
Score = 68.9 bits (167), Expect = 2e-11
Identities = 43/136 (31%), Positives = 72/136 (52%)
Frame = +1
Query: 217 RTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
RTL+VG+L + E I F+ G + K+I + +++ Y FVEF H A L
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMIT--EHTSNDPYCFVEFYEHRDAAAALA 66
Query: 397 TYNGAPMPQTEQAFRLNWASFGMGERRMEGSDLSIFVGDLAGDVTDQVLQETFKSRYASV 576
NG + E ++NWA+ +++ + +FVGDL+ ++T + ++ F + + +
Sbjct: 67 AMNGRKILGKE--VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAF-APFGKI 123
Query: 577 KGARVVTDTLTGRSKG 624
ARVV D TG+SKG
Sbjct: 124 SDARVVKDMATGKSKG 139
Score = 50.1 bits (118), Expect = 9e-06
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Frame = +1
Query: 223 LWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILNTY 402
++VGDL + I S FA G++ + +++++ T S+GYGFV F + AE +
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158
Query: 403 NG----------------APMPQTEQAFRLNWASFGMGERRMEGSDLSIFVGDLAGDVTD 534
G P P++ Q F + + +++ G +A +TD
Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 218
Query: 535 QVLQETFKSRYASVKGARV 591
Q++++TF S + + RV
Sbjct: 219 QLMRQTF-SPFGQIMEIRV 236
Score = 32.3 bits (72), Expect = 2.0
Identities = 15/63 (23%), Positives = 31/63 (49%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILNT 399
T++ G + + + + F+ G+++ +++ K GY FV F +H SA + +
Sbjct: 206 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK------GYSFVRFSTHESAAHAIVS 259
Query: 400 YNG 408
NG
Sbjct: 260 VNG 262
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TZW4 |
| Definition |
tr|A9TZW4|A9TZW4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
144 |
| Score (bit) |
214.0 |
| E-value |
3.0e-54 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953628|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_E12, 5'
(626 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9TZW4|A9TZW4_PHYPA Predicted protein OS=Physcomitrella paten... 214 3e-54
tr|A9TFH5|A9TFH5_PHYPA Predicted protein (Fragment) OS=Physcomit... 214 3e-54
tr|A7R0L9|A7R0L9_VITVI Chromosome chr10 scaffold_312, whole geno... 211 3e-53
tr|A7NZS1|A7NZS1_VITVI Chromosome chr6 scaffold_3, whole genome ... 210 5e-53
tr|B6UA93|B6UA93_MAIZE RNA-binding post-transcriptional regulato... 208 2e-52
tr|B8LRZ2|B8LRZ2_PICSI Putative uncharacterized protein OS=Picea... 207 3e-52
tr|A9NX92|A9NX92_PICSI Putative uncharacterized protein OS=Picea... 207 3e-52
tr|Q9LEB4|Q9LEB4_NICPL RNA Binding Protein 45 OS=Nicotiana plumb... 207 5e-52
tr|A7P9G1|A7P9G1_VITVI Chromosome chr3 scaffold_8, whole genome ... 206 9e-52
tr|Q0VJA3|Q0VJA3_PLAAC ACBF-like dna binding protein (Fragment) ... 203 6e-51
tr|Q8VXZ9|Q8VXZ9_ARATH Putative DNA binding protein ACBF OS=Arab... 202 1e-50
tr|Q10R21|Q10R21_ORYSJ cDNA clone:J013000M06, full insert sequen... 202 2e-50
tr|Q0DUQ0|Q0DUQ0_ORYSJ Os03g0174100 protein (Fragment) OS=Oryza ... 202 2e-50
tr|B8APB9|B8APB9_ORYSI Putative uncharacterized protein OS=Oryza... 202 2e-50
tr|Q2PEV8|Q2PEV8_TRIPR Putative DNA binding protein (Fragment) O... 201 4e-50
tr|Q9FPJ8|Q9FPJ8_ARATH AT5g54900 OS=Arabidopsis thaliana GN=AT5g... 197 6e-49
tr|Q9FFU0|Q9FFU0_ARATH Similarity to polyadenylate-binding prote... 197 6e-49
tr|Q9SAB3|Q9SAB3_ARATH F25C20.21 protein (At1g11650) (Similar to... 196 7e-49
tr|Q3EDE3|Q3EDE3_ARATH Uncharacterized protein At1g11650.1 OS=Ar... 196 7e-49
tr|Q2PF40|Q2PF40_TRIPR Putative DNA binding protein OS=Trifolium... 196 7e-49
tr|A7P0R8|A7P0R8_VITVI Chromosome chr19 scaffold_4, whole genome... 196 9e-49
tr|Q2V9A1|Q2V9A1_SOLTU DNA binding protein ACBF-like OS=Solanum ... 195 2e-48
tr|A5C5B3|A5C5B3_VITVI Putative uncharacterized protein OS=Vitis... 195 2e-48
tr|Q6YZ94|Q6YZ94_ORYSJ Putative RNA Binding Protein 45 OS=Oryza ... 194 5e-48
tr|Q0J7I6|Q0J7I6_ORYSJ Os08g0190200 protein OS=Oryza sativa subs... 194 5e-48
tr|Q9SZ39|Q9SZ39_ARATH Putative DNA binding protein OS=Arabidops... 193 6e-48
tr|Q93W34|Q93W34_ARATH Putative DNA binding protein OS=Arabidops... 193 6e-48
tr|B4FEX6|B4FEX6_MAIZE Putative uncharacterized protein OS=Zea m... 192 1e-47
tr|Q9LEB3|Q9LEB3_NICPL RNA Binding Protein 47 OS=Nicotiana plumb... 192 2e-47
tr|Q8LBV8|Q8LBV8_ARATH Putative DNA binding protein OS=Arabidops... 192 2e-47
>tr|A9TZW4|A9TZW4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_227053 PE=4 SV=1
Length = 453
Score = 214 bits (546), Expect = 3e-54
Identities = 104/144 (72%), Positives = 121/144 (84%), Gaps = 1/144 (0%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHT 375
PQ+ ++++TLWVGDLQ+WMDENY+ + F HTGEV +VKIIRNKQT SEGYGFVEFVSH
Sbjct: 36 PQHHEEVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHV 95
Query: 376 SAERILNTYNGAPMPQTEQAFRLNWASFGMGERRME-GSDLSIFVGDLAGDVTDQVLQET 552
+AE+IL YNG MP TEQ FRLNWASFG+GERR E G + SIFVGDLA DVTD +LQET
Sbjct: 96 AAEKILQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQET 155
Query: 553 FKSRYASVKGARVVTDTLTGRSKG 624
F++RY SVKGA+VVTD TGRSKG
Sbjct: 156 FRTRYPSVKGAKVVTDANTGRSKG 179
Score = 35.8 bits (81), Expect = 2.1
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Frame = +1
Query: 169 YVQCNVAPGPQ-----NADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTM 333
Y P PQ N + T++VG L + + + + F GE++ VKI
Sbjct: 236 YAAYGAQPSPQAFPTDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKI------P 289
Query: 334 ASEGYGFVEFVSHTSAERILNTYNGAPMPQTEQAFRLNW 450
A +G GFV+F AE L + + QA RL+W
Sbjct: 290 AGKGCGFVQFTHRACAEEALQRLHQTVI--GTQAVRLSW 326
>tr|A9TFH5|A9TFH5_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_2572 PE=4 SV=1
Length = 416
Score = 214 bits (546), Expect = 3e-54
Identities = 104/144 (72%), Positives = 121/144 (84%), Gaps = 1/144 (0%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHT 375
PQ+ ++++TLWVGDLQ+WMDENY+ + F HTGEV +VKIIRNKQT SEGYGFVEFVSH
Sbjct: 1 PQSHEEVKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHA 60
Query: 376 SAERILNTYNGAPMPQTEQAFRLNWASFGMGERRME-GSDLSIFVGDLAGDVTDQVLQET 552
+AE+IL YNG MP TEQ FRLNWASFG+GERR E G + SIFVGDLA DVTD +LQET
Sbjct: 61 AAEKILQAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQET 120
Query: 553 FKSRYASVKGARVVTDTLTGRSKG 624
F++RY SVKGA+VVTD TGRSKG
Sbjct: 121 FRTRYPSVKGAKVVTDANTGRSKG 144
Score = 35.8 bits (81), Expect = 2.1
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Frame = +1
Query: 169 YVQCNVAPGPQ-----NADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTM 333
Y P PQ N + T++VG L + + + + F GE++ VKI
Sbjct: 204 YAAYGAQPSPQAFPVDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKI------P 257
Query: 334 ASEGYGFVEFVSHTSAERILNTYNGAPMPQTEQAFRLNW 450
A +G GFV+F AE L + + QA RL+W
Sbjct: 258 AGKGCGFVQFTHRACAEEALQRLHQTVI--GTQAVRLSW 294
>tr|A7R0L9|A7R0L9_VITVI Chromosome chr10 scaffold_312, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00011496001
PE=4 SV=1
Length = 226
Score = 211 bits (537), Expect = 3e-53
Identities = 99/144 (68%), Positives = 119/144 (82%), Gaps = 1/144 (0%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHT 375
P +AD++RTLW+GDLQ+WMDENYI CFAHTGEV +VK+IRNKQT EGYGF+EF+S
Sbjct: 9 PASADEVRTLWIGDLQYWMDENYINGCFAHTGEVTSVKLIRNKQTNQLEGYGFIEFISRA 68
Query: 376 SAERILNTYNGAPMPQTEQAFRLNWASFGMGERRMEGS-DLSIFVGDLAGDVTDQVLQET 552
+AERIL TYNG+ MP EQ FRLNWASFG+GE+R + + D +IFVGDLA DVTD +LQET
Sbjct: 69 AAERILQTYNGSLMPNVEQNFRLNWASFGVGEKRPDNTPDFTIFVGDLASDVTDYMLQET 128
Query: 553 FKSRYASVKGARVVTDTLTGRSKG 624
F+ Y SVKGA+VVTD LT R+KG
Sbjct: 129 FRVHYPSVKGAKVVTDRLTSRTKG 152
Score = 38.1 bits (87), Expect = 0.43
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCF-AHTGEVLNVKIIRNKQTMASEGYGFVEFVSH 372
P N D T++VGDL + + + F H V K++ ++ T ++GYGFV F
Sbjct: 103 PDNTPDF-TIFVGDLASDVTDYMLQETFRVHYPSVKGAKVVTDRLTSRTKGYGFVRFGDE 161
Query: 373 TSAERILNTYNG 408
+ R + NG
Sbjct: 162 SEQLRAMTEMNG 173
>tr|A7NZS1|A7NZS1_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024620001
PE=4 SV=1
Length = 440
Score = 210 bits (535), Expect = 5e-53
Identities = 99/144 (68%), Positives = 121/144 (84%), Gaps = 1/144 (0%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHT 375
P + +++RTLW+GDLQ+W+DENY+ SCFAHTGEV+++KIIRNK T EGYGFVEFVSH
Sbjct: 34 PTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHA 93
Query: 376 SAERILNTYNGAPMPQTEQAFRLNWASFGMGERRME-GSDLSIFVGDLAGDVTDQVLQET 552
+AERIL YNG MP TEQ FRLNWASFG+GERR + G + SIFVGDLA DVTD +LQET
Sbjct: 94 AAERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQET 153
Query: 553 FKSRYASVKGARVVTDTLTGRSKG 624
F+++Y SV+GA+VVTD TGR+KG
Sbjct: 154 FRAQYPSVRGAKVVTDPNTGRTKG 177
Score = 40.0 bits (92), Expect = 0.11
Identities = 27/90 (30%), Positives = 44/90 (48%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILNT 399
T++VG+L + E + F+ GE++ VKI A G GFV+F + TSAE +
Sbjct: 254 TIFVGNLDPNVTEEELKQIFSQFGELVYVKI------PAGRGCGFVQFGTRTSAEEAIQR 307
Query: 400 YNGAPMPQTEQAFRLNWASFGMGERRMEGS 489
G + Q R++W ++ + GS
Sbjct: 308 MQGTVIGQL--VVRISWGRSPTAKQDLPGS 335
Score = 34.7 bits (78), Expect = 4.8
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 27/139 (19%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCF-AHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
+++VGDL + + + F A V K++ + T ++GYGFV+F R +
Sbjct: 135 SIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMT 194
Query: 397 TYNG-----------APMPQTEQAFRLNWASFGMG---------------ERRMEGSDLS 498
NG A P+ F+ +A+ + ++ +
Sbjct: 195 EMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTT 254
Query: 499 IFVGDLAGDVTDQVLQETF 555
IFVG+L +VT++ L++ F
Sbjct: 255 IFVGNLDPNVTEEELKQIF 273
>tr|B6UA93|B6UA93_MAIZE RNA-binding post-transcriptional regulator
csx1 OS=Zea mays PE=2 SV=1
Length = 415
Score = 208 bits (529), Expect = 2e-52
Identities = 100/144 (69%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHT 375
P + +++RTLW+GDLQ+W DENY+ SCFAHTGEV +VKIIRNK T EGYGF+EFVSH
Sbjct: 8 PTSLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHE 67
Query: 376 SAERILNTYNGAPMPQTEQAFRLNWASFGMGERRME-GSDLSIFVGDLAGDVTDQVLQET 552
+AE+IL TYNG MP TE FRLNWASF GERR + GSD SIFVGDLA DVTD +LQET
Sbjct: 68 AAEKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQET 127
Query: 553 FKSRYASVKGARVVTDTLTGRSKG 624
F+ Y+SV+GA+VVTD TGRSKG
Sbjct: 128 FRVNYSSVRGAKVVTDPNTGRSKG 151
Score = 37.0 bits (84), Expect = 0.96
Identities = 25/77 (32%), Positives = 40/77 (51%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILNT 399
T+++G+L + E+ + GE++ VKI K G GFV++ S SAE +
Sbjct: 227 TIFIGNLDPNVIEDELRQICVQFGELIYVKIPVGK------GCGFVQYASRASAEEAVQR 280
Query: 400 YNGAPMPQTEQAFRLNW 450
+G + Q QA RL+W
Sbjct: 281 LHGTMIGQ--QAVRLSW 295
Score = 33.9 bits (76), Expect = 8.1
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCF-AHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
+++VGDL + + + F + V K++ + T S+GYGFV+F R +
Sbjct: 109 SIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMT 168
Query: 397 TYNG 408
NG
Sbjct: 169 EMNG 172
>tr|B8LRZ2|B8LRZ2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 418
Score = 207 bits (528), Expect = 3e-52
Identities = 99/144 (68%), Positives = 118/144 (81%), Gaps = 1/144 (0%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHT 375
P +AD++RTLWVGDLQ+WMDE Y+ SCF + EV++VKIIRNKQT SEGYGFVEF SH
Sbjct: 72 PTSADEVRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHA 131
Query: 376 SAERILNTYNGAPMPQTEQAFRLNWASFGMGERRME-GSDLSIFVGDLAGDVTDQVLQET 552
AER L +NGA MP TEQ +RLNWA+FG+GE+R E G D IFVGDLA DVTD +LQET
Sbjct: 132 GAERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQET 191
Query: 553 FKSRYASVKGARVVTDTLTGRSKG 624
F+SRY +VKGA+VV+D +TGRSKG
Sbjct: 192 FRSRYQTVKGAKVVSDRVTGRSKG 215
Score = 39.7 bits (91), Expect = 0.15
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILNT 399
T++VG L + + + F GE+++VKI K+ GFV+F + SAE L
Sbjct: 284 TIFVGGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRC------GFVQFNNRASAEEALQM 337
Query: 400 YNGAPMPQTEQAFRLNW 450
+G + Q QA RL+W
Sbjct: 338 LHGTVLGQ--QAIRLSW 352
>tr|A9NX92|A9NX92_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 487
Score = 207 bits (528), Expect = 3e-52
Identities = 99/144 (68%), Positives = 118/144 (81%), Gaps = 1/144 (0%)
Frame = +1
Query: 196 PQNADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHT 375
P +AD++RTLWVGDLQ+WMDE Y+ SCF + EV++VKIIRNKQT SEGYGFVEF SH
Sbjct: 72 PTSADEVRTLWVGDLQYWMDETYMQSCFGNNQEVVSVKIIRNKQTGQSEGYGFVEFASHA 131
Query: 376 SAERILNTYNGAPMPQTEQAFRLNWASFGMGERRME-GSDLSIFVGDLAGDVTDQVLQET 552
AER L +NGA MP TEQ +RLNWA+FG+GE+R E G D IFVGDLA DVTD +LQET
Sbjct: 132 GAERFLQNHNGAQMPNTEQFYRLNWATFGIGEKRPEMGPDYPIFVGDLASDVTDYLLQET 191
Query: 553 FKSRYASVKGARVVTDTLTGRSKG 624
F+SRY +VKGA+VV+D +TGRSKG
Sbjct: 192 FRSRYQTVKGAKVVSDRVTGRSKG 215
Score = 39.7 bits (91), Expect = 0.15
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILNT 399
T++VG L + + + F GE+++VKI K+ GFV+F + SAE L
Sbjct: 283 TIFVGGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRC------GFVQFNNRASAEEALQM 336
Query: 400 YNGAPMPQTEQAFRLNW 450
+G + Q QA RL+W
Sbjct: 337 LHGTVLGQ--QAIRLSW 351
>tr|Q9LEB4|Q9LEB4_NICPL RNA Binding Protein 45 OS=Nicotiana
plumbaginifolia GN=rbp45 PE=2 SV=1
Length = 409
Score = 207 bits (526), Expect = 5e-52
Identities = 96/149 (64%), Positives = 121/149 (81%), Gaps = 1/149 (0%)
Frame = +1
Query: 181 NVAPGPQ-NADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFV 357
N P P N +++R+LW+GDLQ+WMDENY+++CF HTGE+++ K+IRNKQT SEGYGF+
Sbjct: 71 NPNPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFL 130
Query: 358 EFVSHTSAERILNTYNGAPMPQTEQAFRLNWASFGMGERRMEGSDLSIFVGDLAGDVTDQ 537
EF SH +AE IL TYNG MP EQ FR+NWAS G GERR + ++ +IFVGDLA DVTD
Sbjct: 131 EFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHTIFVGDLAADVTDY 190
Query: 538 VLQETFKSRYASVKGARVVTDTLTGRSKG 624
+LQETFKS Y+SV+GA+VVTD +TGRSKG
Sbjct: 191 ILQETFKSVYSSVRGAKVVTDRITGRSKG 219
Score = 44.7 bits (104), Expect = 0.005
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILNT 399
T++VG L + E ++ F+ GE+++VKI+ K+ GFV+F + SAE+ L++
Sbjct: 283 TIFVGGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRC------GFVQFGTRASAEQALSS 336
Query: 400 YNGAPMPQTEQAFRLNW 450
NG + Q+ RL+W
Sbjct: 337 LNGTQL--GGQSIRLSW 351
Score = 37.7 bits (86), Expect = 0.56
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 14/145 (9%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHT-GEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
T++VGDL + + + F V K++ ++ T S+GYGFV+F + R +
Sbjct: 177 TIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMT 236
Query: 397 TYNG----------APMPQTEQAFRLNWASFGMGERRMEGSD---LSIFVGDLAGDVTDQ 537
NG P + A++ + SD +IFVG L V ++
Sbjct: 237 EMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTIFVGGLDPTVAEE 296
Query: 538 VLQETFKSRYASVKGARVVTDTLTG 612
L++ F S Y + ++V G
Sbjct: 297 HLRQVF-SPYGELVHVKIVAGKRCG 320
>tr|A7P9G1|A7P9G1_VITVI Chromosome chr3 scaffold_8, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00036552001
PE=4 SV=1
Length = 384
Score = 206 bits (524), Expect = 9e-52
Identities = 99/142 (69%), Positives = 118/142 (83%), Gaps = 1/142 (0%)
Frame = +1
Query: 202 NADDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSA 381
+ D+I+TLWVGDL WMD+NY+ +CF HTGEV ++KIIRNKQT SEGYGFVEF S +A
Sbjct: 46 STDEIKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATA 105
Query: 382 ERILNTYNGAPMPQTEQAFRLNWASFGMGERRME-GSDLSIFVGDLAGDVTDQVLQETFK 558
E+IL++YNG MP TEQ FRLNWA+F G+RR + GSDLSIFVGDLA DVTD +LQETF
Sbjct: 106 EKILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFA 165
Query: 559 SRYASVKGARVVTDTLTGRSKG 624
+RY SVKGA+VVTD+ TGRSKG
Sbjct: 166 TRYPSVKGAKVVTDSNTGRSKG 187
Score = 44.7 bits (104), Expect = 0.005
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 27/151 (17%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFA-HTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
+++VGDL + + + FA V K++ + T S+GYGFV F R +N
Sbjct: 145 SIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMN 204
Query: 397 TYNG-----APM------PQTEQAFRLNWASFGM---------------GERRMEGSDLS 498
NG PM P+ ++ ++S + + + ++ +
Sbjct: 205 EMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTT 264
Query: 499 IFVGDLAGDVTDQVLQETFKSRYASVKGARV 591
IFVG L +VTD+ L+++F S++ V ++
Sbjct: 265 IFVGGLDSEVTDEDLRQSF-SQFGEVVSVKI 294
Score = 42.7 bits (99), Expect = 0.018
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +1
Query: 184 VAPGPQ-NADDIRT-LWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFV 357
VA G Q N D T ++VG L + + + F+ GEV++VKI K G GFV
Sbjct: 250 VAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGK------GCGFV 303
Query: 358 EFVSHTSAERILNTYNGAPMPQTEQAFRLNW 450
+F + SAE L NG + +Q RL+W
Sbjct: 304 QFANRNSAEDALQRLNGTVI--GKQTVRLSW 332
>tr|Q0VJA3|Q0VJA3_PLAAC ACBF-like dna binding protein (Fragment)
OS=Platanus acerifolia GN=dbdA PE=2 SV=1
Length = 216
Score = 203 bits (517), Expect = 6e-51
Identities = 97/140 (69%), Positives = 114/140 (81%), Gaps = 1/140 (0%)
Frame = +1
Query: 208 DDIRTLWVGDLQFWMDENYIASCFAHTGEVLNVKIIRNKQTMASEGYGFVEFVSHTSAER 387
++ +T+WVGDL +WMD NY+ +CFAHTGEV+++K+IRNKQT SEGYGFVEF S +AE+
Sbjct: 26 EENKTIWVGDLHYWMDGNYLNNCFAHTGEVISIKVIRNKQTGQSEGYGFVEFFSREAAEK 85
Query: 388 ILNTYNGAPMPQTEQAFRLNWASFGMGERRME-GSDLSIFVGDLAGDVTDQVLQETFKSR 564
+L YNG MP TEQ FRLNWASF MGERR E GSD SIFVGDL+ DVTD +LQETF SR
Sbjct: 86 VLQNYNGTAMPNTEQPFRLNWASFSMGERRSEAGSDHSIFVGDLSSDVTDTLLQETFASR 145
Query: 565 YASVKGARVVTDTLTGRSKG 624
Y SVKGA+VV D TGRSKG
Sbjct: 146 YPSVKGAKVVIDANTGRSKG 165
Score = 35.4 bits (80), Expect = 2.8
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 220 TLWVGDLQFWMDENYIASCFAHT-GEVLNVKIIRNKQTMASEGYGFVEFVSHTSAERILN 396
+++VGDL + + + FA V K++ + T S+GYGFV F R ++
Sbjct: 123 SIFVGDLSSDVTDTLLQETFASRYPSVKGAKVVIDANTGRSKGYGFVRFGDDNERSRAIS 182
Query: 397 TYNGA 411
NGA
Sbjct: 183 EMNGA 187
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