DK953642 |
Clone id |
TST39A01NGRL0018_F02 |
Library |
TST39 |
Length |
629 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_F02. 5' end sequence. |
Accession |
DK953642 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL926Contig1 |
Sequence |
ATGGCGCCCGACGGTGGAGGTAGTAAAAGGACACGGGTCGCTGCATCGGCCTCTGTATCC CATGAGCAGGATGGCGGCAGCATCATTCCGTGCCTGCCCGACGATTTAGCCCTCTATATT TTGCATAGACAACCGCGCTCTCTCCAGAACCGCCAGAGACTTGTCTGTCATTCATGGAAG GACGCCATGGAACCTGCACGCATGACTTCTATCAGAAAATCTCTCAACATCTCTGAGGCA TGGCCAGTTTTTGTCACCCGCAGGGATTTTCCATACAAACAAAGCAGGTCTCTGTTCACC ATAGTAGACCCTATTGGGTGCCTGAGGTGCATCATACCCGTACCTTGTCAGTTTCCTCAA CACATGCATCGTTATTTTCATTTCTCTGTGATGGGTACTGTAGGGAGTAAGGTCTTGATT TCAGTCGTACTGGATACGGCCAAGGATGAAACGCAGCTTCAGCTGATGCAAGGTGTGTAT AGCTTTGATGGCTTGAGTATGAAGTGGGAGGACGCATTGTACTCATCTCTACCCACCACA TTAACCCCAACCTTGAAGCAGACAAGCGCCATTGCCGTGGACATGAATGGGGGCTATCTG TATGTGGCAGGCGGCTATGGCCAGCGTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LM55 |
Definition |
sp|Q9LM55|FBK8_ARATH F-box/Kelch-repeat protein At1g22040 OS=Arabidopsis thaliana |
Align length |
89 |
Score (bit) |
52.4 |
E-value |
2.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5BGZ3 |
Definition |
tr|A5BGZ3|A5BGZ3_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
97 |
Score (bit) |
59.3 |
E-value |
2.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953642|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_F02, 5' (629 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5BGZ3|A5BGZ3_VITVI Putative uncharacterized protein OS=Vitis... 59 2e-07 tr|A7Q6X7|A7Q6X7_VITVI Chromosome chr12 scaffold_57, whole genom... 59 3e-07 tr|A9TGE6|A9TGE6_PHYPA Predicted protein OS=Physcomitrella paten... 57 7e-07 tr|Q8S6N3|Q8S6N3_ORYSJ Os10g0363600 protein OS=Oryza sativa subs... 56 2e-06 tr|A2Z6E7|A2Z6E7_ORYSI Putative uncharacterized protein OS=Oryza... 56 2e-06 tr|B7ZZ66|B7ZZ66_MAIZE Putative uncharacterized protein OS=Zea m... 55 3e-06 tr|B4FDS3|B4FDS3_MAIZE Putative uncharacterized protein OS=Zea m... 55 3e-06 tr|Q8S7U1|Q8S7U1_ORYSJ Putative Kelch motif containing protein O... 55 3e-06 tr|Q10R89|Q10R89_ORYSJ Os03g0167800 protein OS=Oryza sativa subs... 55 3e-06 tr|A3AEI2|A3AEI2_ORYSJ Putative uncharacterized protein OS=Oryza... 55 3e-06 tr|A9RMG2|A9RMG2_PHYPA Predicted protein OS=Physcomitrella paten... 55 5e-06 tr|B6U1Z3|B6U1Z3_MAIZE Kelch motif family protein OS=Zea mays PE... 54 6e-06 tr|B6SWC5|B6SWC5_MAIZE Kelch motif family protein OS=Zea mays PE... 54 8e-06 tr|B8LKU6|B8LKU6_PICSI Putative uncharacterized protein OS=Picea... 54 1e-05 tr|B6TP81|B6TP81_MAIZE Ring canal kelch OS=Zea mays PE=2 SV=1 54 1e-05 tr|B6SZ54|B6SZ54_MAIZE Kelch motif family protein OS=Zea mays PE... 54 1e-05 tr|A5C9A3|A5C9A3_VITVI Putative uncharacterized protein (Chromos... 53 2e-05 tr|Q69S84|Q69S84_ORYSJ Os02g0574900 protein OS=Oryza sativa subs... 52 3e-05 tr|B8AEB3|B8AEB3_ORYSI Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|A7PF14|A7PF14_VITVI Chromosome chr11 scaffold_13, whole genom... 52 3e-05 tr|A7NV34|A7NV34_VITVI Chromosome chr18 scaffold_1, whole genome... 52 3e-05 tr|A5BHH2|A5BHH2_VITVI Putative uncharacterized protein OS=Vitis... 52 3e-05 tr|A0SHJ2|A0SHJ2_ORYSI Kelch-motif containing protein (Fragment)... 52 3e-05 tr|B8BGS5|B8BGS5_ORYSI Putative uncharacterized protein OS=Oryza... 51 5e-05 tr|A0SHJ8|A0SHJ8_ORYRU Kelch-motif containing protein (Fragment)... 51 5e-05 tr|A0SHJ6|A0SHJ6_ORYRU Kelch-motif containing protein (Fragment)... 51 5e-05 tr|A0SHJ5|A0SHJ5_ORYRU Kelch-motif containing protein (Fragment)... 51 5e-05 tr|A0SHJ4|A0SHJ4_ORYSI Kelch-motif containing protein (Fragment)... 51 5e-05 tr|A0SHJ3|A0SHJ3_ORYSI Kelch-motif containing protein (Fragment)... 51 5e-05 tr|A0SHI7|A0SHI7_ORYSJ Kelch-motif containing protein (Fragment)... 51 5e-05
>tr|A5BGZ3|A5BGZ3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011508 PE=4 SV=1 Length = 499
Score = 59.3 bits (142), Expect = 2e-07 Identities = 34/97 (35%), Positives = 53/97 (54%) Frame = +1
Query: 25 KRTRVAASASVSHEQDGGSIIPCLPDDLALYILHRQPRSLQNRQRLVCHSWKDAMEPARM 204 KR R+ S+S+S E + +IP LPD+++ IL R PR RLV SWK A+ + Sbjct: 27 KRQRL--SSSISEENENVRLIPNLPDEISFQILARVPRIFYLNMRLVSRSWKGAIMSTEL 84
Query: 205 TSIRKSLNISEAWPVFVTRRDFPYKQSRSLFTIVDPI 315 ++RK L +E W +T+ K + L+ +DP+ Sbjct: 85 FNLRKELGTTEEWLYILTK----IKDDKLLWYSLDPL 117
>tr|A7Q6X7|A7Q6X7_VITVI Chromosome chr12 scaffold_57, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00031580001 PE=4 SV=1 Length = 496
Score = 58.5 bits (140), Expect = 3e-07 Identities = 34/97 (35%), Positives = 53/97 (54%) Frame = +1
Query: 25 KRTRVAASASVSHEQDGGSIIPCLPDDLALYILHRQPRSLQNRQRLVCHSWKDAMEPARM 204 KR R+ S+S+S E + +IP LPD+++ IL R PR RLV SWK A+ + Sbjct: 44 KRQRL--SSSISEENENVRLIPNLPDEISFQILARVPRIFYLNVRLVSRSWKGAIMSTEL 101
Query: 205 TSIRKSLNISEAWPVFVTRRDFPYKQSRSLFTIVDPI 315 ++RK L +E W +T+ K + L+ +DP+ Sbjct: 102 FNLRKELGTTEEWLYILTK----IKDDKLLWYSLDPL 134
>tr|A9TGE6|A9TGE6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169940 PE=4 SV=1 Length = 441
Score = 57.4 bits (137), Expect = 7e-07 Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 5/199 (2%) Frame = +1
Query: 40 AASASVSHEQDGGSIIPCLPDDLALYILHRQPRSLQNRQRLVCHSWKDAMEPARMTSIRK 219 AA + +D +I LPDD+ I + PR + RLVC SW+ E + S+R Sbjct: 57 AAQIQKTGVEDKSPLIHSLPDDVMKLIFAQLPRQSLAKTRLVCSSWRRVAEDQDIASLRC 116
Query: 220 SLNISEAWPVFVTRRDFPYKQSRSLFTIVDPIGCLRCIIPVPCQFPQHMHRYFHFSVMGT 399 ++++E W ++V DFP + F DPI ++P P ++ F+ + Sbjct: 117 KMDVAEGW-IYVL-PDFP---QGAPFRAYDPIAAKWSVLP-PTPRRSESQQWVGFASV-A 169
Query: 400 VGSKVLISVVLDTAKD-----ETQLQLMQGVYSFDGLSMKWEDAXXXXXXXXXXXXXKQT 564 +G K+L+ + D + + V +D L+ KW Sbjct: 170 LGHKLLLIGGSRSKSDAASNIHSTSVVCSDVIIYDALTNKWRKG---------AKMNTPR 220
Query: 565 SAIAVDMNGGYLYVAGGYG 621 S A M GG +YVAGG G Sbjct: 221 SWFASSMIGGKVYVAGGQG 239
>tr|Q8S6N3|Q8S6N3_ORYSJ Os10g0363600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0073L01.3 PE=2 SV=1 Length = 475
Score = 55.8 bits (133), Expect = 2e-06 Identities = 33/104 (31%), Positives = 53/104 (50%) Frame = +1
Query: 4 APDGGGSKRTRVAASASVSHEQDGGSIIPCLPDDLALYILHRQPRSLQNRQRLVCHSWKD 183 A SK+ R++A +S D +IP LPD+++L IL R PR ++V SWK Sbjct: 20 ASKADSSKKLRMSAPP-LSGGYDHPGLIPGLPDEISLQILARMPRMGYLNAKMVSRSWKA 78
Query: 184 AMEPARMTSIRKSLNISEAWPVFVTRRDFPYKQSRSLFTIVDPI 315 A+ + +RK L +SE W +T+ D + ++ DP+ Sbjct: 79 AITGVELYRVRKELGVSEEWLYMLTKSD----DGKLVWNAFDPV 118
>tr|A2Z6E7|A2Z6E7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_33229 PE=4 SV=1 Length = 475
Score = 55.8 bits (133), Expect = 2e-06 Identities = 33/104 (31%), Positives = 53/104 (50%) Frame = +1
Query: 4 APDGGGSKRTRVAASASVSHEQDGGSIIPCLPDDLALYILHRQPRSLQNRQRLVCHSWKD 183 A SK+ R++A +S D +IP LPD+++L IL R PR ++V SWK Sbjct: 20 ASKADSSKKLRMSAPP-LSGGYDHPGLIPGLPDEISLQILARMPRMGYLNAKMVSRSWKA 78
Query: 184 AMEPARMTSIRKSLNISEAWPVFVTRRDFPYKQSRSLFTIVDPI 315 A+ + +RK L +SE W +T+ D + ++ DP+ Sbjct: 79 AITGVELYRVRKELGVSEEWLYMLTKSD----DGKLVWNAFDPV 118
>tr|B7ZZ66|B7ZZ66_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 479
Score = 55.5 bits (132), Expect = 3e-06 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Frame = +1
Query: 4 APDGGGSKRTRVAASASVSHEQDGGS-IIPCLPDDLALYILHRQPRSLQNRQRLVCHSWK 180 AP K+TR+++ H G +IP LPD+++L IL R PR + ++V SWK Sbjct: 21 APRPDPCKKTRLSSPLCTIHGSHGHPRLIPGLPDEVSLQILARMPRMGYLKAKMVSRSWK 80
Query: 181 DAMEPARMTSIRKSLNISEAWPVFVTR 261 A+ A + +RK L ++E W +T+ Sbjct: 81 AAVTGAELYRLRKELGVAEEWLYILTK 107
>tr|B4FDS3|B4FDS3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 479
Score = 55.5 bits (132), Expect = 3e-06 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Frame = +1
Query: 4 APDGGGSKRTRVAASASVSHEQDGGS-IIPCLPDDLALYILHRQPRSLQNRQRLVCHSWK 180 AP K+TR+++ H G +IP LPD+++L IL R PR + ++V SWK Sbjct: 21 APRPDPCKKTRLSSPLCTIHGSHGHPRLIPGLPDEVSLQILARMPRMGYLKAKMVSRSWK 80
Query: 181 DAMEPARMTSIRKSLNISEAWPVFVTR 261 A+ A + +RK L ++E W +T+ Sbjct: 81 AAVTGAELYRLRKELGVAEEWLYILTK 107
>tr|Q8S7U1|Q8S7U1_ORYSJ Putative Kelch motif containing protein OS=Oryza sativa subsp. japonica GN=OSJNBa0091P11.35 PE=4 SV=1 Length = 493
Score = 55.1 bits (131), Expect = 3e-06 Identities = 40/120 (33%), Positives = 57/120 (47%) Frame = +1
Query: 1 MAPDGGGSKRTRVAASASVSHEQDGGSIIPCLPDDLALYILHRQPRSLQNRQRLVCHSWK 180 M PD +KR ++ Q ++P LPDDLA+ L R PR RLVC W Sbjct: 108 MQPDIKPNKRKSRSSHKERCRTQ--APLLPGLPDDLAITCLMRVPRLEHTNLRLVCKRWN 165
Query: 181 DAMEPARMTSIRKSLNISEAWPVFVTRRDFPYKQSRSLFTIVDPIGCLRCIIPVPCQFPQ 360 + S+RK L ++E W VFV +RD K S F V + + + PVP ++ + Sbjct: 166 RLLSGNYYYSLRKKLGMAEEW-VFVFKRDRDRKISWHAFDPVHQV--WKSLPPVPAEYSE 222
>tr|Q10R89|Q10R89_ORYSJ Os03g0167800 protein OS=Oryza sativa subsp. japonica GN=Os03g0167800 PE=2 SV=1 Length = 438
Score = 55.1 bits (131), Expect = 3e-06 Identities = 40/120 (33%), Positives = 57/120 (47%) Frame = +1
Query: 1 MAPDGGGSKRTRVAASASVSHEQDGGSIIPCLPDDLALYILHRQPRSLQNRQRLVCHSWK 180 M PD +KR ++ Q ++P LPDDLA+ L R PR RLVC W Sbjct: 53 MQPDIKPNKRKSRSSHKERCRTQ--APLLPGLPDDLAITCLMRVPRLEHTNLRLVCKRWN 110
Query: 181 DAMEPARMTSIRKSLNISEAWPVFVTRRDFPYKQSRSLFTIVDPIGCLRCIIPVPCQFPQ 360 + S+RK L ++E W VFV +RD K S F V + + + PVP ++ + Sbjct: 111 RLLSGNYYYSLRKKLGMAEEW-VFVFKRDRDRKISWHAFDPVHQV--WKSLPPVPAEYSE 167
>tr|A3AEI2|A3AEI2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009204 PE=4 SV=1 Length = 502
Score = 55.1 bits (131), Expect = 3e-06 Identities = 40/120 (33%), Positives = 57/120 (47%) Frame = +1
Query: 1 MAPDGGGSKRTRVAASASVSHEQDGGSIIPCLPDDLALYILHRQPRSLQNRQRLVCHSWK 180 M PD +KR ++ Q ++P LPDDLA+ L R PR RLVC W Sbjct: 117 MQPDIKPNKRKSRSSHKERCRTQ--APLLPGLPDDLAITCLMRVPRLEHTNLRLVCKRWN 174
Query: 181 DAMEPARMTSIRKSLNISEAWPVFVTRRDFPYKQSRSLFTIVDPIGCLRCIIPVPCQFPQ 360 + S+RK L ++E W VFV +RD K S F V + + + PVP ++ + Sbjct: 175 RLLSGNYYYSLRKKLGMAEEW-VFVFKRDRDRKISWHAFDPVHQV--WKSLPPVPAEYSE 231
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