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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953643
Clone id TST39A01NGRL0018_F04
Library
Length 557
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_F04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGAAATGAAGCGTTACCAATTCACGCAAGCCTTCCAAGCTGCGCGGTGGCTGCAGCAGA
GAATCTCTGTGGGAAAATCTCCAAGCGCAGCAGGACTTGCAGAAGAAATTGTTTCGAACA
AACGTTCGCACATATCCACACATCCATTCTCATCAAGTACCGGAGCCTCCTTTGGCAGCA
CAATTTGCAGAGCCGGGTTGCACAAAACATCTTCATCATCTCGGTCTTTGCTGCTCTACA
GTGGTTCTCACGGTTCAAGAGCTTTCTATGGGTATCGCCTCTTCCACACAGATTCGCGTG
GATTGCAACATTTTTCAAGGAAAGGCTTCAGTTCTAAGCGGTGGAGTGTCCGCCAGATTG
TGCTAGTTAGTGTTGCCACCACGGGCTTTTGTGCCGCTATCTTCTTCTCACATCGTGAAG
TTGTTCCATACACCTATCGCTCCCATTTTGTACTCATTTGGCCTGAGCTTGAAATGCGAT
TGGTGGAGCCCCAGTTTCAAGCTCTCAAGAAGGAATGGAAGCCTTTCATTCTTCCCCCCT
ACCATCCTGAATCCATT
■■Homology search results ■■ -
sp_hit_id P36163
Definition sp|P36163|OMA1_YEAST Mitochondrial metalloendopeptidase OMA1 OS=Saccharomyces cerevisiae
Align length 58
Score (bit) 39.7
E-value 0.01
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953643|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_F04, 5'
         (557 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P36163|OMA1_YEAST Mitochondrial metalloendopeptidase OMA1 OS=...    40   0.010
sp|Q9P7G4|OMA1_SCHPO Mitochondrial metalloendopeptidase OMA1 OS=...    36   0.15 
sp|Q9W698|1A1L1_FUGRU 1-aminocyclopropane-1-carboxylate synthase...    32   1.6  
sp|Q64424|LIPR2_MYOCO Pancreatic lipase-related protein 2 OS=Myo...    32   2.7  
sp|Q9SW70|SRP_VITRI Stress-related protein OS=Vitis riparia GN=S...    30   6.1  

>sp|P36163|OMA1_YEAST Mitochondrial metalloendopeptidase OMA1
           OS=Saccharomyces cerevisiae GN=OMA1 PE=1 SV=2
          Length = 345

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 17/58 (29%), Positives = 34/58 (58%)
 Frame = +3

Query: 384 GFCAAIFFSHREVVPYTYRSHFVLIWPELEMRLVEPQFQALKKEWKPFILPPYHPESI 557
           G C+  +++H +  P + RS F+ +   LE+ +    ++++ ++ +  ILPP HP SI
Sbjct: 73  GGCSLFYYTHLDKAPVSDRSRFIWVSRPLELTIGNYTYKSIWRQTQQEILPPQHPLSI 130


>sp|Q9P7G4|OMA1_SCHPO Mitochondrial metalloendopeptidase OMA1
           OS=Schizosaccharomyces pombe GN=oma1 PE=2 SV=1
          Length = 337

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = +3

Query: 402 FFSHREVVPYTYRSHFVLIWPELEMRLVEPQFQALKKEWKPFILPPYHPESI 557
           +F+H E VP + R  F  +  + E R+ +  ++ +  E+   +LP YHP ++
Sbjct: 82  YFTHLEYVPISNRRRFNDVSLDFEKRMAQDAYKEVMSEYGDRMLPSYHPTTL 133


>sp|Q9W698|1A1L1_FUGRU 1-aminocyclopropane-1-carboxylate
           synthase-like protein 1 OS=Fugu rubripes GN=accs PE=3
           SV=1
          Length = 618

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 423 VPYTYRSHFVLIWPELEMRLVEPQFQALKKEWKPFI 530
           VPY  RS  + +W +L   L EP F+   + W+ F+
Sbjct: 418 VPYLDRSAAMFVWADLRKFLAEPSFEEEMRLWRHFL 453


>sp|Q64424|LIPR2_MYOCO Pancreatic lipase-related protein 2
           OS=Myocastor coypus GN=PNLIPRP2 PE=1 SV=1
          Length = 470

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 22/74 (29%), Positives = 33/74 (44%)
 Frame = +1

Query: 316 QGKASVLSGGVSARLC*LVLPPRAFVPLSSSHIVKLFHTPIAPILYSFGLSLKCDWWSPS 495
           +G    ++G   A  C    P    +  S +  V + HT IAPI+ SFG           
Sbjct: 186 KGLVGRITGLDPAEPCFQDTPEEVRLDPSDAMFVDVIHTDIAPIIPSFG----------- 234

Query: 496 FKLSRRNGSLSFFP 537
           F +S++ G + FFP
Sbjct: 235 FGMSQKVGHMDFFP 248


>sp|Q9SW70|SRP_VITRI Stress-related protein OS=Vitis riparia GN=SRP
           PE=2 SV=1
          Length = 248

 Score = 30.4 bits (67), Expect = 6.1
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
 Frame = -2

Query: 418 SRCE---KKIAAQ-KPVVATLTSTIWRTLHRLELKPFLEKCCNPRESVWKRRY 272
           S+CE   K++ ++ +PV      + WR+L+RL L P + +   P  + W  +Y
Sbjct: 146 SKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKY 198
tr_hit_id A9SIL5
Definition tr|A9SIL5|A9SIL5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 102
Score (bit) 77.8
E-value 4.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953643|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_F04, 5'
         (557 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SIL5|A9SIL5_PHYPA Predicted protein OS=Physcomitrella paten...    78   4e-13
tr|Q6Z754|Q6Z754_ORYSJ Os02g0735100 protein OS=Oryza sativa subs...    77   8e-13
tr|B8AI27|B8AI27_ORYSI Putative uncharacterized protein OS=Oryza...    77   8e-13
tr|A3AB44|A3AB44_ORYSJ Putative uncharacterized protein OS=Oryza...    77   8e-13
tr|B8A019|B8A019_MAIZE Putative uncharacterized protein OS=Zea m...    75   3e-12
tr|B6T554|B6T554_MAIZE Peptidase family M48 containing protein O...    75   3e-12
tr|A7QGW0|A7QGW0_VITVI Chromosome chr16 scaffold_94, whole genom...    71   4e-11
tr|Q9FLI5|Q9FLI5_ARATH Similarity to peptidase OS=Arabidopsis th...    58   3e-07
tr|Q8GXE5|Q8GXE5_ARATH Putative uncharacterized protein At5g5174...    58   3e-07
tr|B5VMM9|B5VMM9_YEAS6 YKR087Cp-like protein OS=Saccharomyces ce...    40   0.11 
tr|B3LRG1|B3LRG1_YEAS1 Putative uncharacterized protein OS=Sacch...    40   0.11 
tr|A7A046|A7A046_YEAS7 Mitochondrial metalloendopeptidase OS=Sac...    40   0.11 
tr|Q6C283|Q6C283_YARLI YALI0F09988p OS=Yarrowia lipolytica GN=YA...    39   0.14 
tr|Q4Q371|Q4Q371_LEIMA Putative uncharacterized protein OS=Leish...    37   0.55 
tr|Q98GE8|Q98GE8_RHILO Mll3362 protein OS=Rhizobium loti GN=mll3...    37   0.94 
tr|A4BIF8|A4BIF8_9GAMM Putative uncharacterized protein OS=Reine...    36   1.6  
tr|B2WH87|B2WH87_PYRTR Mitochondrial metalloendopeptidase OMA1 O...    36   1.6  
tr|A0P1G7|A0P1G7_9RHOB Putative uncharacterized protein OS=Labre...    35   2.1  
tr|A8CXZ4|A8CXZ4_9CHLR Xylose isomerase domain protein TIM barre...    35   2.7  
tr|Q9A7T9|Q9A7T9_CAUCR Putative uncharacterized protein OS=Caulo...    35   3.6  
tr|Q92LX0|Q92LX0_RHIME Hypothetical transmembrane protein OS=Rhi...    35   3.6  
tr|B4SNA9|B4SNA9_STRM5 Xylose isomerase domain protein TIM barre...    35   3.6  
tr|A6UD88|A6UD88_SINMW Xylose isomerase domain protein TIM barre...    35   3.6  
tr|B8GVJ8|B8GVJ8_CAUCR IolE-related protein OS=Caulobacter cresc...    35   3.6  
tr|B6A957|B6A957_9CRYT Putative uncharacterized protein OS=Crypt...    35   3.6  
tr|Q2GB72|Q2GB72_NOVAD Xylose isomerase-like TIM barrel OS=Novos...    34   4.6  
tr|B3PF30|B3PF30_CELJU AP endonuclease family 2 C terminus famil...    34   4.6  
tr|B2FSM0|B2FSM0_STRMK Putative xylose isomerase/endonuclease fa...    34   4.6  
tr|B5WMM1|B5WMM1_9BURK Xylose isomerase domain protein TIM barre...    34   4.6  
tr|A0P255|A0P255_9RHOB Putative uncharacterized protein OS=Labre...    34   4.6  

>tr|A9SIL5|A9SIL5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_185330 PE=4 SV=1
          Length = 454

 Score = 77.8 bits (190), Expect = 4e-13
 Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 8/102 (7%)
 Frame = +3

Query: 276 RLFHTDSRGLQHFSRKGFS--------SKRWSVRQIVLVSVATTGFCAAIFFSHREVVPY 431
           R ++TD RG+ HF ++G S          R   ++I+++  A     A ++F++ + VPY
Sbjct: 81  RFYYTDPRGVVHFKKRGPSVWIEESRGGGRAGQKKILILLGAAGSLSAYVYFTNLQTVPY 140

Query: 432 TYRSHFVLIWPELEMRLVEPQFQALKKEWKPFILPPYHPESI 557
           T+R HFVL+ P +E  L E +F+ +K+E    ILPP HPES+
Sbjct: 141 THRKHFVLVGPGMERNLGEQEFKNVKQEMSAMILPPIHPESV 182


>tr|Q6Z754|Q6Z754_ORYSJ Os02g0735100 protein OS=Oryza sativa subsp.
           japonica GN=P0487D09.7 PE=4 SV=1
          Length = 448

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
 Frame = +3

Query: 276 RLFHTDSRGLQ--HFSRKGFSSKRWSVRQIVLVSVATTGFCAAIFFSHREVVPYTYRSHF 449
           R F+T  +  +  HF+R+  S      R++  V V + G  AA++F + E VPYT R+H 
Sbjct: 73  RYFYTSPQRQKVVHFNRRRGSRWYHDPRKLTTVVVVSGGAAAAVYFGNLETVPYTNRTHL 132

Query: 450 VLIWPELEMRLVEPQFQALKKEWKPFILPPYHPESI 557
           +L+ P LE +L E QF  LKKE  P ILPP HP+SI
Sbjct: 133 ILLSPPLERQLGESQFNNLKKELGPKILPPLHPDSI 168


>tr|B8AI27|B8AI27_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08841 PE=4 SV=1
          Length = 448

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
 Frame = +3

Query: 276 RLFHTDSRGLQ--HFSRKGFSSKRWSVRQIVLVSVATTGFCAAIFFSHREVVPYTYRSHF 449
           R F+T  +  +  HF+R+  S      R++  V V + G  AA++F + E VPYT R+H 
Sbjct: 73  RYFYTSPQRQKVVHFNRRRGSRWYHDPRKLTTVVVVSGGAAAAVYFGNLETVPYTNRTHL 132

Query: 450 VLIWPELEMRLVEPQFQALKKEWKPFILPPYHPESI 557
           +L+ P LE +L E QF  LKKE  P ILPP HP+SI
Sbjct: 133 ILLSPPLERQLGESQFNNLKKELGPKILPPLHPDSI 168


>tr|A3AB44|A3AB44_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008016 PE=4 SV=1
          Length = 512

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
 Frame = +3

Query: 276 RLFHTDSRGLQ--HFSRKGFSSKRWSVRQIVLVSVATTGFCAAIFFSHREVVPYTYRSHF 449
           R F+T  +  +  HF+R+  S      R++  V V + G  AA++F + E VPYT R+H 
Sbjct: 62  RYFYTSPQRQKVVHFNRRRGSRWYHDPRKLTTVVVVSGGAAAAVYFGNLETVPYTNRTHL 121

Query: 450 VLIWPELEMRLVEPQFQALKKEWKPFILPPYHPESI 557
           +L+ P LE +L E QF  LKKE  P ILPP HP+SI
Sbjct: 122 ILLSPPLERQLGESQFNNLKKELGPKILPPLHPDSI 157


>tr|B8A019|B8A019_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 442

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
 Frame = +3

Query: 276 RLFHTDSRGLQ--HFSRKGFSSKRW--SVRQIVLVSVATTGFCAAIFFSHREVVPYTYRS 443
           R ++T  R  Q  HF+R+   S RW    R++    + + G   A +F H E VPYT RS
Sbjct: 64  RHYYTSPRRQQVVHFNRRRGGS-RWYHDQRKLTAAVLISGGGAVAFYFGHLETVPYTNRS 122

Query: 444 HFVLIWPELEMRLVEPQFQALKKEWKPFILPPYHPESI 557
           H V++ P+ E +L E QF  LKKE+ P ILPP HP+SI
Sbjct: 123 HLVVLSPKFERQLGESQFAQLKKEFGPKILPPLHPDSI 160


>tr|B6T554|B6T554_MAIZE Peptidase family M48 containing protein
           OS=Zea mays PE=2 SV=1
          Length = 440

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
 Frame = +3

Query: 276 RLFHTDSRGLQ--HFSRKGFSSKRW--SVRQIVLVSVATTGFCAAIFFSHREVVPYTYRS 443
           R ++T  R  Q  HF+R+   S RW    R++    + + G   A +F H E VPYT RS
Sbjct: 62  RHYYTSPRRQQVVHFNRRRGGS-RWYHDQRKLTAAVLISGGGAVAFYFGHLETVPYTNRS 120

Query: 444 HFVLIWPELEMRLVEPQFQALKKEWKPFILPPYHPESI 557
           H V++ P+ E +L E QF  LKKE+ P ILPP HP+SI
Sbjct: 121 HLVVLSPKFERQLGESQFAQLKKEFGPKILPPLHPDSI 158


>tr|A7QGW0|A7QGW0_VITVI Chromosome chr16 scaffold_94, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00038511001
           PE=3 SV=1
          Length = 434

 Score = 70.9 bits (172), Expect = 4e-11
 Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +3

Query: 276 RLFHTDSRGLQHFSRKGFSSKRW--SVRQIVLVSVATTGFCAAIFFSHREVVPYTYRSHF 449
           R ++ D   +QHF  +G   +RW  + R + +V V  +G    ++F + E +PYT R+HF
Sbjct: 74  RYYYVDRYRVQHFRPRG--PRRWFQNPRTVFIVVVVGSGVLITVYFGNLEAIPYTNRTHF 131

Query: 450 VLIWPELEMRLVEPQFQALKKEWKPFILPPYHPESI 557
           VL+   +E R+ E QF+ LK  +K  ILP  HP+S+
Sbjct: 132 VLLSRSMERRIGEAQFEQLKGTFKGKILPAIHPDSV 167


>tr|Q9FLI5|Q9FLI5_ARATH Similarity to peptidase OS=Arabidopsis
           thaliana PE=4 SV=1
          Length = 485

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
 Frame = +3

Query: 276 RLFHTDSRGLQHFSRKGFSSKRWSVRQIVLVSVATTGFCAAI--FFSHREVVPYTYRSHF 449
           R ++ D   ++HF  +G    RW      + +V   G    I     + E +PYT R+HF
Sbjct: 122 RYYYVDRYQVRHFKPRG--PGRWFQNPRTVFTVVLVGSVGLITLIVGNTETIPYTKRTHF 179

Query: 450 VLIWPELEMRLVEPQFQALKKEWKPFILPPYHPESI 557
           +L+   +E  L E QF+ +KK ++  ILP  HPESI
Sbjct: 180 ILLSKPMEKLLGETQFEQIKKTYQGKILPATHPESI 215


>tr|Q8GXE5|Q8GXE5_ARATH Putative uncharacterized protein
           At5g51740/MIO24_13 OS=Arabidopsis thaliana
           GN=At5g51740/MIO24_13 PE=2 SV=1
          Length = 442

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
 Frame = +3

Query: 276 RLFHTDSRGLQHFSRKGFSSKRWSVRQIVLVSVATTGFCAAI--FFSHREVVPYTYRSHF 449
           R ++ D   ++HF  +G    RW      + +V   G    I     + E +PYT R+HF
Sbjct: 79  RYYYVDRYQVRHFKPRG--PGRWFQNPRTVFTVVLVGSVGLITLIVGNTETIPYTKRTHF 136

Query: 450 VLIWPELEMRLVEPQFQALKKEWKPFILPPYHPESI 557
           +L+   +E  L E QF+ +KK ++  ILP  HPESI
Sbjct: 137 ILLSKPMEKLLGETQFEQIKKTYQGKILPATHPESI 172


>tr|B5VMM9|B5VMM9_YEAS6 YKR087Cp-like protein OS=Saccharomyces
           cerevisiae (strain AWRI1631) GN=AWRI1631_113080 PE=4
           SV=1
          Length = 345

 Score = 39.7 bits (91), Expect = 0.11
 Identities = 17/58 (29%), Positives = 34/58 (58%)
 Frame = +3

Query: 384 GFCAAIFFSHREVVPYTYRSHFVLIWPELEMRLVEPQFQALKKEWKPFILPPYHPESI 557
           G C+  +++H +  P + RS F+ +   LE+ +    ++++ ++ +  ILPP HP SI
Sbjct: 73  GGCSLFYYTHLDKAPVSDRSRFIWVSRPLELTIGNYTYKSIWRQTQQEILPPQHPLSI 130