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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953662
Clone id TST39A01NGRL0018_F23
Library
Length 572
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_F23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAACGTTCGTTGGCGACGAAAGCAGAGACAGATATTGACCGAGGAGAGATTCAGATCTTG
GACATTTTGCTCTTCTTGATGCGAAGTTATTAGTCCCATGCATTGAGAGACATGGATGAG
TCTTTGCCACCTGCTCCGCCGCCGCCCGTGCCACAAGAAGCTTCTTCTGGATGGGGTGGT
GGCTGGGGGAACTGGGGTAGTTCTGCTTTTTCAGTTCTGTCCGGTATTCAGAAAGTGGCT
GTCTCGGCAGCGGATGAGATAACCAAAAATGCAATAGCAGCTGCCAAAGATGCTGCTAAA
GGAGTGGCGGAGCTGCAAGAGAATGTTACTGGCTCTCTCAAGCTGCAAGATCAAGGTGAT
GCTGAGGACGCATCACCACTTGTGGAGACAGCTGAGAGTGACACTGAGCTTCCTCAAGAC
AAGCTAAGGAGTGCAGCCTTACAGAAGCTGGAAGAAGCTGGTCAAGATACCGCCTTGGGT
CACGGTTTGAAAGCAATAGATACATCGGTGGAGAATCTAGCTTCTGGAGCATGGCAGGCA
TTCGGGACTGCTTGGAGGGGGAGTAGAAATTT
■■Homology search results ■■ -
sp_hit_id P55326
Definition sp|P55326|YZG1_CAEEL Uncharacterized protein F13E6.1 OS=Caenorhabditis elegans
Align length 75
Score (bit) 34.7
E-value 0.35
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953662|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_F23, 5'
         (572 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P55326|YZG1_CAEEL Uncharacterized protein F13E6.1 OS=Caenorha...    35   0.35 
sp|Q6C452|MAD1_YARLI Spindle assembly checkpoint component MAD1 ...    33   1.3  
sp|Q9NXG0|CNTLN_HUMAN Centlein OS=Homo sapiens GN=CNTLN PE=2 SV=4      31   5.0  
sp|Q04ZU4|ATPG_LEPBL ATP synthase gamma chain OS=Leptospira borg...    31   5.0  
sp|Q04S17|ATPG_LEPBJ ATP synthase gamma chain OS=Leptospira borg...    31   5.0  
sp|Q6DFE7|S38A7_XENLA Putative sodium-coupled neutral amino acid...    30   6.5  
sp|Q15T97|CLPS_PSEA6 ATP-dependent Clp protease adapter protein ...    30   6.5  
sp|Q4FZU8|FA65A_RAT Protein FAM65A OS=Rattus norvegicus GN=Fam65...    30   8.5  
sp|Q68FE6|FA65A_MOUSE Protein FAM65A OS=Mus musculus GN=Fam65a P...    30   8.5  
sp|Q6ZS17|FA65A_HUMAN Protein FAM65A OS=Homo sapiens GN=FAM65A P...    30   8.5  

>sp|P55326|YZG1_CAEEL Uncharacterized protein F13E6.1
           OS=Caenorhabditis elegans GN=F13E6.1 PE=1 SV=2
          Length = 195

 Score = 34.7 bits (78), Expect = 0.35
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = +1

Query: 310 ELQENVTGSLKLQDQGDAEDASPLVETAESDTELPQ-DKLRSAALQKLEEAGQDTALGHG 486
           EL +++  SLK     DA   +  V  A SDT   + + +R+++L K  E+   +AL + 
Sbjct: 103 ELSQDINRSLKTVTDTDAYQKTAEVAAATSDTVKEKWNDMRNSSLFKSFESKLGSALNNA 162

Query: 487 LKAIDTSVENLASGA 531
             A  TS+++LA  A
Sbjct: 163 KMAASTSIDHLAGAA 177


>sp|Q6C452|MAD1_YARLI Spindle assembly checkpoint component MAD1
           OS=Yarrowia lipolytica GN=MAD1 PE=3 SV=1
          Length = 704

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = -2

Query: 196 PSSP--SHHPIQKKLLVARAAAEQVAKTHPCLSMHGTNNFASRRAKCPR 56
           PSSP   H    +K L +      V  TH   S+HGT + ASR ++ PR
Sbjct: 5   PSSPFIEHPETPRKALFSSNRPSPVRSTHATPSLHGTPSTASRFSRTPR 53


>sp|Q9NXG0|CNTLN_HUMAN Centlein OS=Homo sapiens GN=CNTLN PE=2 SV=4
          Length = 1405

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = +1

Query: 310  ELQENVTGSLKLQDQGDAEDASPLVETAESDTELPQDKLRSAALQKLEEAGQD-TALGHG 486
            EL   +  S +  D+  +E A+  V +   D +    K++  A +K    G+  T L H 
Sbjct: 790  ELINPMEKSHQSADRAKSEMATMKVRSGRYDCKTTMTKVKFKAAKKNCSVGRHHTVLNHS 849

Query: 487  LKAIDTSVENLASGAWQ 537
            +K +    ENL+   W+
Sbjct: 850  IKVMSNVFENLSKDGWE 866


>sp|Q04ZU4|ATPG_LEPBL ATP synthase gamma chain OS=Leptospira
           borgpetersenii serovar Hardjo-bovis (strain L550)
           GN=atpG PE=3 SV=1
          Length = 286

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 499 LLLSNRDPRRYLDQLLPASVRLHSLACLEEAQCHSQLSPQVVMR 368
           L++    P R L+ LLP  V+   L  + EA C  Q++ ++ M+
Sbjct: 203 LVVYEPSPERVLESLLPLVVKTAFLKAILEANCSEQIARRIAMK 246


>sp|Q04S17|ATPG_LEPBJ ATP synthase gamma chain OS=Leptospira
           borgpetersenii serovar Hardjo-bovis (strain JB197)
           GN=atpG PE=3 SV=1
          Length = 286

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 499 LLLSNRDPRRYLDQLLPASVRLHSLACLEEAQCHSQLSPQVVMR 368
           L++    P R L+ LLP  V+   L  + EA C  Q++ ++ M+
Sbjct: 203 LVVYEPSPERVLESLLPLVVKTAFLKAILEANCSEQIARRIAMK 246


>sp|Q6DFE7|S38A7_XENLA Putative sodium-coupled neutral amino acid
           transporter 7 OS=Xenopus laevis GN=slc38a7 PE=2 SV=1
          Length = 452

 Score = 30.4 bits (67), Expect = 6.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 369 VLSITLILQLERASNILLQLRHSFSSIFGSCYCIFGYLIRC 247
           V  + LIL L     I +Q   SF S+ G+CY     ++RC
Sbjct: 172 VTGVLLILPLSLPREISVQRYASFLSVLGTCYVTVVVVVRC 212


>sp|Q15T97|CLPS_PSEA6 ATP-dependent Clp protease adapter protein
           clpS OS=Pseudoalteromonas atlantica (strain T6c /
           BAA-1087) GN=clpS PE=3 SV=1
          Length = 106

 Score = 30.4 bits (67), Expect = 6.5
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -2

Query: 571 NFYSPSKQSRMPAMLQKLDSPPMYLLLSNRDPRRYLDQLLPASVRLHSL 425
           N  +  ++ ++  + QKL  PPMY +L N D    +D ++   VR  +L
Sbjct: 5   NTINIEREKQLDTVKQKLAPPPMYKVLLNNDDYTPMDFVIEVLVRFFNL 53


>sp|Q4FZU8|FA65A_RAT Protein FAM65A OS=Rattus norvegicus GN=Fam65a
            PE=2 SV=2
          Length = 1217

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 310  ELQENVTGSLKLQDQGDAEDASPLVETAESDTELPQDKLRSAALQKLEEAGQDTALGH 483
            ++Q  V G L L      E   PLV   ++DTE     +R AA Q L++ G++    H
Sbjct: 1140 DVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE----AVREAARQSLQQCGEEGQSAH 1193


>sp|Q68FE6|FA65A_MOUSE Protein FAM65A OS=Mus musculus GN=Fam65a PE=1
            SV=1
          Length = 1223

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 310  ELQENVTGSLKLQDQGDAEDASPLVETAESDTELPQDKLRSAALQKLEEAGQDTALGH 483
            ++Q  V G L L      E   PLV   ++DTE     +R AA Q L++ G++    H
Sbjct: 1146 DVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE----AVREAARQSLQQCGEEGQSAH 1199


>sp|Q6ZS17|FA65A_HUMAN Protein FAM65A OS=Homo sapiens GN=FAM65A PE=1
            SV=1
          Length = 1223

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +1

Query: 310  ELQENVTGSLKLQDQGDAEDASPLVETAESDTELPQDKLRSAALQKLEEAGQDTALGH 483
            ++Q  V G L L      E   PLV   ++DTE     +R AA Q L++ G++    H
Sbjct: 1146 DVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE----AVREAARQSLQQCGEEGQSAH 1199
tr_hit_id B8LLI8
Definition tr|B8LLI8|B8LLI8_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 122
Score (bit) 87.4
E-value 5.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953662|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_F23, 5'
         (572 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LLI8|B8LLI8_PICSI Putative uncharacterized protein OS=Picea...    87   5e-16
tr|A5AZC4|A5AZC4_VITVI Putative uncharacterized protein OS=Vitis...    82   2e-14
tr|A9U3U9|A9U3U9_PHYPA Predicted protein OS=Physcomitrella paten...    75   2e-12
tr|Q8L4R9|Q8L4R9_ARATH Putative uncharacterized protein At2g1586...    67   9e-10
tr|Q84R31|Q84R31_ORYSJ Putative uncharacterized protein OSJNBb00...    62   2e-08
tr|B8AR51|B8AR51_ORYSI Putative uncharacterized protein OS=Oryza...    62   2e-08
tr|Q9XIL7|Q9XIL7_ARATH Putative uncharacterized protein At2g1586...    59   1e-07
tr|A7P9B2|A7P9B2_VITVI Chromosome chr3 scaffold_8, whole genome ...    52   2e-05
tr|A8INH1|A8INH1_CHLRE Potential GTPase activation protein OS=Ch...    39   0.27 
tr|Q033M6|Q033M6_LACC3 Phosphotransferase system, mannitol-speci...    36   1.7  
tr|B3WBT6|B3WBT6_LACCB Mannitol PTS, EIICB OS=Lactobacillus case...    36   1.7  
tr|Q6MNV8|Q6MNV8_BDEBA Putative uncharacterized protein OS=Bdell...    34   5.0  
tr|Q0RM17|Q0RM17_FRAAA Putative uncharacterized protein OS=Frank...    34   6.6  
tr|A0L6J5|A0L6J5_MAGSM Putative uncharacterized protein OS=Magne...    33   8.6  

>tr|B8LLI8|B8LLI8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 502

 Score = 87.4 bits (215), Expect = 5e-16
 Identities = 54/122 (44%), Positives = 71/122 (58%)
 Frame = +1

Query: 205 AFSVLSGIQKVAVSAADEITXXXXXXXXXXXXXXXELQENVTGSLKLQDQGDAEDASPLV 384
           AFSVLS +QK A  AADEI                   E ++  +K +D+ +AE+ +  +
Sbjct: 24  AFSVLSDLQKAAAQAADEIARNASAVAKSAISDLQSADEPLSEPVK-EDETEAENVATQL 82

Query: 385 ETAESDTELPQDKLRSAALQKLEEAGQDTALGHGLKAIDTSVENLASGAWQAFGTAWRGS 564
           E    D E  ++K R AAL +LE+A QDT LG GL+A D+SVE  ASGAWQAFG A +G 
Sbjct: 83  EY---DNE--EEKRRKAALDRLEKASQDTFLGQGLRAFDSSVETFASGAWQAFGNALKGG 137

Query: 565 RN 570
            N
Sbjct: 138 TN 139


>tr|A5AZC4|A5AZC4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_013684 PE=4 SV=1
          Length = 527

 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
 Frame = +1

Query: 211 SVLSGIQKVAVSAADEITXXXXXXXXXXXXXXXELQENVTGSLKLQDQGDAEDASPLVET 390
           S LS +QK A  AA+EI+               + Q     S   +D+ + ++++     
Sbjct: 40  SYLSDLQKAAAVAAEEISRNAVEAAKTAAKSITDAQNMDEDSESSKDEEEVDESA----- 94

Query: 391 AESDTELPQDKLRSAALQKLEEAGQDTALGH----GLKAIDTSVENLASGAWQAFGTAWR 558
            E   +   DKLR +AL KLE+A +D+ LG     GLK +D SVENLASGAWQA G+AW+
Sbjct: 95  TEDKNDHEDDKLRKSALDKLEKASEDSFLGQANVQGLKVLDNSVENLASGAWQALGSAWK 154

Query: 559 GSRN 570
           GS N
Sbjct: 155 GSSN 158


>tr|A9U3U9|A9U3U9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155740 PE=4 SV=1
          Length = 413

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
 Frame = +1

Query: 310 ELQENVTGSLKLQDQGDAE---DASPLVETAESDTELPQDKLRSAALQKLEEAGQDTALG 480
           +LQ  VT ++++ D  + +   D +  +E+A+      +D  R AAL KLE A QD+ LG
Sbjct: 51  DLQHTVTDAVQVVDDEEVDALKDENKELESADPKESSEEDARRKAALTKLENASQDSFLG 110

Query: 481 HGLKAIDTSVENLASGAWQAFGTAWRGSRN 570
            GLK +D SV+NL +GAWQA G AW+ S N
Sbjct: 111 QGLKVLDDSVDNLTTGAWQALGNAWKESVN 140


>tr|Q8L4R9|Q8L4R9_ARATH Putative uncharacterized protein At2g15860
           OS=Arabidopsis thaliana GN=At2g15860 PE=2 SV=1
          Length = 512

 Score = 66.6 bits (161), Expect = 9e-10
 Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
 Frame = +1

Query: 208 FSVLSGIQKVAVSAADEITXXXXXXXXXXXXXXXELQENVTGSLKLQDQGDAEDASPLVE 387
           FSVLS +QK    AA++I+               E+ E         D+     A    +
Sbjct: 52  FSVLSDLQK----AAEDISRNAAAVAEKAAKSIAEMGE--------VDEDSESSAKEEEK 99

Query: 388 TAESDTELPQD----KLRSAALQKLEEAGQDTALGHGLKAIDTSVENLASGAWQAFGTAW 555
           T E+DTE   D    KL+ +AL++LE A +++ L  GLK  D SVE+  SGAWQAFG A 
Sbjct: 100 TEEADTEQDSDDENAKLKKSALERLEGASEESLLSQGLKVFDDSVESFTSGAWQAFGNAL 159

Query: 556 RG 561
           +G
Sbjct: 160 KG 161


>tr|Q84R31|Q84R31_ORYSJ Putative uncharacterized protein
           OSJNBb0016H12.28 (Putative uncharacterized protein
           OSJNBa0057G07.23) OS=Oryza sativa subsp. japonica
           GN=OSJNBb0016H12.28 PE=4 SV=1
          Length = 494

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 32/68 (47%), Positives = 43/68 (63%)
 Frame = +1

Query: 355 GDAEDASPLVETAESDTELPQDKLRSAALQKLEEAGQDTALGHGLKAIDTSVENLASGAW 534
           GD E+     + AE   E  +D+ R AAL KLE A +D+ LG GLK  D+SVE + +G W
Sbjct: 67  GDGEEKEK-EKAAEGGGE--EDEQRKAALDKLENASEDSLLGQGLKVFDSSVETITTGTW 123

Query: 535 QAFGTAWR 558
           QA G+AW+
Sbjct: 124 QALGSAWK 131


>tr|B8AR51|B8AR51_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_13438 PE=4 SV=1
          Length = 494

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 32/68 (47%), Positives = 43/68 (63%)
 Frame = +1

Query: 355 GDAEDASPLVETAESDTELPQDKLRSAALQKLEEAGQDTALGHGLKAIDTSVENLASGAW 534
           GD E+     + AE   E  +D+ R AAL KLE A +D+ LG GLK  D+SVE + +G W
Sbjct: 67  GDGEEKEK-EKAAEGGGE--EDERRKAALDKLENASEDSLLGQGLKVFDSSVETITTGTW 123

Query: 535 QAFGTAWR 558
           QA G+AW+
Sbjct: 124 QALGSAWK 131


>tr|Q9XIL7|Q9XIL7_ARATH Putative uncharacterized protein At2g15860
           OS=Arabidopsis thaliana GN=At2g15860 PE=4 SV=1
          Length = 539

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 43/137 (31%), Positives = 59/137 (43%), Gaps = 19/137 (13%)
 Frame = +1

Query: 208 FSVLSGIQKVAVSAADEITXXXXXXXXXXXXXXXELQENVTGSLKLQDQGDAEDASPLVE 387
           FSVLS +QK A   +  I+               E        +   D+     A    +
Sbjct: 52  FSVLSDLQKAAEDISRNISDPKLMVELCMAAAVAEKAAKSIAEMGEVDEDSESSAKEEEK 111

Query: 388 TAESDTELPQD----KLRSAALQKLEEAGQDTALGH---------------GLKAIDTSV 510
           T E+DTE   D    KL+ +AL++LE A +++ L                 GLK  D SV
Sbjct: 112 TEEADTEQDSDDENAKLKKSALERLEGASEESLLSQANVRIYKVSRSFIFQGLKVFDDSV 171

Query: 511 ENLASGAWQAFGTAWRG 561
           E+  SGAWQAFG A +G
Sbjct: 172 ESFTSGAWQAFGNALKG 188


>tr|A7P9B2|A7P9B2_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036499001
           PE=4 SV=1
          Length = 1068

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = +1

Query: 484 GLKAIDTSVENLASGAWQAFGTAWRGSRN 570
           GLK +D SVENLASGAWQA G+AW+GS N
Sbjct: 682 GLKVLDNSVENLASGAWQALGSAWKGSSN 710


>tr|A8INH1|A8INH1_CHLRE Potential GTPase activation protein
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_188892 PE=4
           SV=1
          Length = 1138

 Score = 38.5 bits (88), Expect = 0.27
 Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
 Frame = +1

Query: 331 GSLKLQDQGDAEDASPLVET---AESDTELPQDKLRSA----ALQKLEEAGQDT------ 471
           G L+   +G   D   L ET   A +D    +D+   A    AL +  EA +        
Sbjct: 549 GKLREVARGAVRDVKDLTETFQAALADVTGAEDEEEEAGRLSALDRAAEAAEGESAADAA 608

Query: 472 ---ALGHGLKAIDTSVENLASGAWQAFGTAWRG 561
              AL  GL+AID  VE LA+GA +AF + W G
Sbjct: 609 GAEALEVGLQAIDAQVEQLATGAAKAFSSLWGG 641


>tr|Q033M6|Q033M6_LACC3 Phosphotransferase system, mannitol-specific
           IIBC component OS=Lactobacillus casei (strain ATCC 334)
           GN=LSEI_2888 PE=4 SV=1
          Length = 608

 Score = 35.8 bits (81), Expect = 1.7
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 319 ENVTGSLKLQDQGDAEDASPLVETAESDTELPQDKLRSAALQKLEE 456
           + +  SLK +  G  ++A P  ET+++  E P+D+L+   L K+ E
Sbjct: 475 DEIIASLKAEAVGGTDEAMPATETSKAKQETPEDELKELDLDKITE 520