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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953668
Clone id TST39A01NGRL0018_G05
Library
Length 618
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_G05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AATTAAGAGGATAGAATATAATTGGTGCAGCTATGAAAACGTCAGCGACTGCGTCGACGA
GCAGCAACATGATGAGCAGTGAGAGGAGTAGCATGAGTAGCTGTGGAAGGGGGCTGGGGC
TGGCGAGGACGGCCAAGGCCGTAGCGGAGGCGGTGATCGTCGCGGCTTGCTTGATGTGGG
TGCTCTACTGGTTCTTCAAGCCGGAGCCGCAGGCCGACGATACCCACCTCTCCAAGAACA
CCCGCTCTCGCTTCTTCCGCACTGATGGCCGGGAAGGATTTTCCCTTATATACCAAACAT
TGCCTTTTGTTGTTGTGGCCATTTTGAGCTTTTTGGTGATTGAGCTACGAGCTTTTATCA
GGTCAAAAGAGTCAATGCCATCCATACAGGCACAACAAAAATTAAGATTTTCAAGTTTAA
ACGCCTACCCCTTGTGGGTGCATAGTCCTTTTGGAGTTGTAACTATGGCTGATTTTCTCT
TCATTATTGGCATACTCTTCATGGTGTTTTATCACTTTGGGAGAGTTACTCATCTATCGT
TCCAAGAAATCGAGAATGGAACCGTCATGCATCATCATGGTCCTATTGTGTCCAAACAAT
GGCAGAAGGTGAACTATG
■■Homology search results ■■ -
sp_hit_id A4FBB2
Definition sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338)
Align length 57
Score (bit) 32.7
E-value 1.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953668|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_G05, 5'
         (618 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase OS=Sacchar...    33   1.5  
sp|Q58286|Y876_METJA Putative ABC transporter permease protein M...    30   7.6  
sp|A0LK67|Y2137_SYNFM UPF0182 protein Sfum_2137 OS=Syntrophobact...    30   9.9  
sp|Q4V8G4|WDR78_RAT WD repeat-containing protein 78 OS=Rattus no...    30   9.9  
sp|Q8ERS9|PPNK1_OCEIH Probable inorganic polyphosphate/ATP-NAD k...    30   9.9  

>sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase
           OS=Saccharopolyspora erythraea (strain NRRL 23338)
           GN=apt PE=3 SV=1
          Length = 182

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = -2

Query: 287 KGKSFPAISAEEARAGVLGEV-------GIVGLRLRLEEPVEHPHQASRDDHRLRYG 138
           +G  F  ++  EAR  +LG         G+VGLR    +P + P  A R D+RL YG
Sbjct: 57  RGHDFDVVAGVEARGFLLGAAVAQAHGTGVVGLR----KPGKLPEVAHRVDYRLEYG 109


>sp|Q58286|Y876_METJA Putative ABC transporter permease protein
           MJ0876 OS=Methanocaldococcus jannaschii GN=MJ0876 PE=3
           SV=1
          Length = 351

 Score = 30.4 bits (67), Expect = 7.6
 Identities = 18/66 (27%), Positives = 33/66 (50%)
 Frame = +3

Query: 309 VVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHSPFGVVTMADFLFII 488
           +V  +LS+  + LRA++ +      IQ        SL+   L    P   +T+   +FII
Sbjct: 154 IVALLLSYFFMGLRAYLIANAEELKIQEYWGFTIGSLSKITLGDVIP---MTICSIIFII 210

Query: 489 GILFMV 506
           G++F++
Sbjct: 211 GVMFLI 216


>sp|A0LK67|Y2137_SYNFM UPF0182 protein Sfum_2137 OS=Syntrophobacter
           fumaroxidans (strain DSM 10017 / MPOB) GN=Sfum_2137 PE=3
           SV=1
          Length = 874

 Score = 30.0 bits (66), Expect = 9.9
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
 Frame = +3

Query: 285 LIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAY----------PL 434
           L+Y+ + F  V +L FL+  L  ++ S+       A  K R ++L+ Y           L
Sbjct: 52  LLYRYIVFGAVTLLFFLIFFLNFWVASRYVGNVPPAPSKFRIAALDRYLNVVRMFRSGSL 111

Query: 435 WVHSPFGVV 461
           WV++P  ++
Sbjct: 112 WVYTPLSLI 120


>sp|Q4V8G4|WDR78_RAT WD repeat-containing protein 78 OS=Rattus
           norvegicus GN=Wdr78 PE=2 SV=1
          Length = 803

 Score = 30.0 bits (66), Expect = 9.9
 Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
 Frame = +3

Query: 429 PLW----VHSPFGVVTMADFLFIIGILFMVFYHFGRVTHLSFQEIENGTVM-------HH 575
           P+W      SP+GV T  DF      L  V YH G V   + Q   N  V+        H
Sbjct: 484 PMWPERIYQSPYGV-TSVDFSISSPNLLAVGYHNGTVAIYNVQSNHNTPVLDSSESPQKH 542

Query: 576 HGPIVSKQW 602
            GP+   QW
Sbjct: 543 LGPVWQVQW 551


>sp|Q8ERS9|PPNK1_OCEIH Probable inorganic polyphosphate/ATP-NAD
           kinase 1 OS=Oceanobacillus iheyensis GN=ppnK1 PE=3 SV=1
          Length = 267

 Score = 30.0 bits (66), Expect = 9.9
 Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
 Frame = +3

Query: 207 PQADDTHLSKNT--RSRFFRTDGREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMP 380
           P  +   +++N    +R FRT G       + T  F+   + S  +I++  F ++ +++ 
Sbjct: 175 PSLEAIQITENASINNRVFRTIGSPLILPKHHTC-FLKPMVDSSFLIQIDHFTKNYQNVK 233

Query: 381 SIQ---AQQKLRFSSLNAYPLW 437
           SIQ   A++K+RF+    +P W
Sbjct: 234 SIQCRVAKEKVRFARFKQFPFW 255
tr_hit_id Q6PND7
Definition tr|Q6PND7|Q6PND7_CUCSA Ferric reductase OS=Cucumis sativus
Align length 128
Score (bit) 42.7
E-value 0.017
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953668|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_G05, 5'
         (618 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6PND7|Q6PND7_CUCSA Ferric reductase OS=Cucumis sativus PE=2 ...    43   0.017
tr|Q9FLW3|Q9FLW3_ARATH FRO2 homolog OS=Arabidopsis thaliana PE=4...    40   0.084
tr|Q000W4|Q000W4_9ROSI Fe(III)-chelate reductase OS=Citrus junos...    40   0.11 
tr|Q8W110|Q8W110_ARATH AT5g23980/MZF18_14 OS=Arabidopsis thalian...    39   0.19 
tr|A9S7N1|A9S7N1_PHYPA Ferric reductase-like transmembrane compo...    39   0.19 
tr|A7PZM1|A7PZM1_VITVI Chromosome chr15 scaffold_40, whole genom...    39   0.19 
tr|A5ATI3|A5ATI3_VITVI Putative uncharacterized protein OS=Vitis...    39   0.19 
tr|Q9LMM2|Q9LMM2_ARATH F22L4.13 protein OS=Arabidopsis thaliana ...    38   0.42 
tr|Q94EK6|Q94EK6_PEA Ferric-chelate reductase (Iron reductase) O...    38   0.42 
tr|P92950|P92950_ARATH FRO1 protein OS=Arabidopsis thaliana GN=F...    38   0.42 
tr|B6AYT1|B6AYT1_9RHOB TRAP transporter, DctM-like membrane prot...    37   0.93 
tr|Q5XMI8|Q5XMI8_PEA Iron reductase OS=Pisum sativum GN=FRO1 PE=...    37   0.93 
tr|Q8RWS6|Q8RWS6_ARATH Putative FRO2; NADPH oxidase OS=Arabidops...    37   1.2  
tr|Q9LTA0|Q9LTA0_ARATH FRO2-like protein; NADPH oxidase-like OS=...    36   2.1  
tr|A6FS35|A6FS35_9RHOB TRAP C4-dicarboxylate transport system pe...    35   2.7  
tr|Q3KTM0|Q3KTM0_ARATH FRO1-like protein OS=Arabidopsis thaliana...    35   2.7  
tr|B8A3B5|B8A3B5_MAIZE Putative uncharacterized protein OS=Zea m...    35   2.7  
tr|Q9FLW2|Q9FLW2_ARATH FRO2 homolog OS=Arabidopsis thaliana PE=4...    35   3.5  
tr|B6SW74|B6SW74_MAIZE Ferric reductase-like transmembrane compo...    35   3.5  
tr|B5BMT4|B5BMT4_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.0  
tr|B3XUQ4|B3XUQ4_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.0  
tr|B3XT30|B3XT30_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.0  
tr|B2NGN9|B2NGN9_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.0  
tr|B2NEI6|B2NEI6_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.0  
tr|B2D9L7|B2D9L7_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.0  
tr|B1RY54|B1RY54_UREUR Putative membrane protein OS=Ureaplasma u...    34   6.0  
tr|B5KGU9|B5KGU9_MALXI Ferric reductase OS=Malus xiaojinensis GN...    34   6.0  

>tr|Q6PND7|Q6PND7_CUCSA Ferric reductase OS=Cucumis sativus PE=2
           SV=1
          Length = 694

 Score = 42.7 bits (99), Expect = 0.017
 Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
 Frame = +3

Query: 171 LMWVLYWFFKPEPQADDTHLSKNTRSRFFRTD--GREGFSLIYQTLPFVVVAILSFLVIE 344
           L W+  W   P        L K  R + +++   G EG SL+  T P + +AIL  +   
Sbjct: 20  LGWIFLWVMMPTNTYRKKWLPK-VREKSYKSTYFGSEGTSLLMYTFPILFIAILGCVYNH 78

Query: 345 LRAFIRSKESMPSIQAQQKLRFSSLNAY--PLWVHSPFGVVTMADFLFIIGILFMVFYHF 518
           L      K S P+++ ++  +   L  +  P  V  P G+V+  +   +   + ++ + F
Sbjct: 79  L----EKKRSDPNVKTRKGTKHHGLAMWKQPAIVKGPLGIVSWTELTLLTMFIILLVWSF 134

Query: 519 GRVTHLSF 542
               H SF
Sbjct: 135 ATYLHNSF 142


>tr|Q9FLW3|Q9FLW3_ARATH FRO2 homolog OS=Arabidopsis thaliana PE=4
           SV=1
          Length = 703

 Score = 40.4 bits (93), Expect = 0.084
 Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
 Frame = +3

Query: 171 LMWVLYWFF--------KPEPQADDTHLSKNTRSRFFRTDGREGFSLIYQTLPFVVVAIL 326
           L W+L W          K  P+     LSK   + +F   G +G +L+  T+P + +A+L
Sbjct: 17  LGWILVWIMISTNLFKSKWTPK-----LSKYLNTTYF---GPQGTNLVLLTVPMMFIAVL 68

Query: 327 SFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHSPFGVVTMADFLFIIGILFMV 506
           S + +     IR+K S   +   ++ +   +    + V +P G+VT  +  F +  + ++
Sbjct: 69  SCVYLH----IRNKLSQSYLYECREWKLKRIMGRVIMVMNPLGIVTATELTFSLLFVALL 124

Query: 507 FYHFGRVTHLSFQEIENGTVMHHHGPIVSKQWQ 605
            +      +LS+        +H H    +K WQ
Sbjct: 125 AWSLYNYLYLSYH-------VHLHNDDNAKIWQ 150


>tr|Q000W4|Q000W4_9ROSI Fe(III)-chelate reductase OS=Citrus junos
           PE=2 SV=1
          Length = 700

 Score = 40.0 bits (92), Expect = 0.11
 Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 5/150 (3%)
 Frame = +3

Query: 171 LMWVLYWFFKPEPQADDT---HLSKNTRSRFFRTDGREGFSLIYQTLPFVVVAILSFLVI 341
           L W+L W   P     +T    L+    S +FR    +G +L+  + P +++A+L  + +
Sbjct: 17  LGWLLVWALIPTKVYKNTWTPKLNNKLNSTYFR---EQGTNLLLFSFPVMLIALLGCVYL 73

Query: 342 ELRAFIRSKESMPSIQAQQKLRFSSL--NAYPLWVHSPFGVVTMADFLFIIGILFMVFYH 515
            L+      +    +Q+++K+R   L  +  P+ V +P G+VT  +    +  +  + + 
Sbjct: 74  HLQ------KKPNKLQSKRKMRSPRLFFSQRPVLVMAPLGIVTAIELTIAVMFVAFLIWA 127

Query: 516 FGRVTHLSFQEIENGTVMHHHGPIVSKQWQ 605
                ++SF  +     MH  G    K WQ
Sbjct: 128 LANYLYVSFGHLH----MHKAG---EKVWQ 150


>tr|Q8W110|Q8W110_ARATH AT5g23980/MZF18_14 OS=Arabidopsis thaliana
           GN=At5g23980 PE=2 SV=1
          Length = 699

 Score = 39.3 bits (90), Expect = 0.19
 Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 8/153 (5%)
 Frame = +3

Query: 171 LMWVLYWFF--------KPEPQADDTHLSKNTRSRFFRTDGREGFSLIYQTLPFVVVAIL 326
           L W+L W          K  P+     LSK   + +F   G +G +L+  T+P + +A+L
Sbjct: 17  LGWILVWIMISTNLFKSKWTPK-----LSKYLNTTYF---GPQGTNLVLLTVPMMFIAVL 68

Query: 327 SFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHSPFGVVTMADFLFIIGILFMV 506
           S + +     I+ K + P    Q++ +   +    + V +P G+VT  +  F +  + ++
Sbjct: 69  SCVYLH----IQKKPTQP----QREWKLKRIMGRVIMVMNPLGIVTATELTFSLLFVALL 120

Query: 507 FYHFGRVTHLSFQEIENGTVMHHHGPIVSKQWQ 605
            +      +LS+        +H H    +K WQ
Sbjct: 121 AWSLYNYLYLSYH-------VHLHNDDNAKIWQ 146


>tr|A9S7N1|A9S7N1_PHYPA Ferric reductase-like transmembrane
           component OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_163308 PE=4 SV=1
          Length = 801

 Score = 39.3 bits (90), Expect = 0.19
 Identities = 26/126 (20%), Positives = 49/126 (38%)
 Frame = +3

Query: 177 WVLYWFFKPEPQADDTHLSKNTRSRFFRTDGREGFSLIYQTLPFVVVAILSFLVIELRAF 356
           W   WF  P  +      +      +     +   +      P + +AI + L +EL   
Sbjct: 68  WFTLWFRMPSTEGRAFRKTVQDELNYSTFWSKAATNYTMYAAPVIALAIFALLFLELEER 127

Query: 357 IRSKESMPSIQAQQKLRFSSLNAYPLWVHSPFGVVTMADFLFIIGILFMVFYHFGRVTHL 536
              +    + Q      + ++   P+ V +P GVVT+ D + I  +L    + +GR+T  
Sbjct: 128 YPERRCPSAKQPMLVRLYRAIWTQPILVKTPIGVVTIIDIVIIGMVLVCTCWIWGRLTVR 187

Query: 537 SFQEIE 554
            F  I+
Sbjct: 188 QFAAID 193


>tr|A7PZM1|A7PZM1_VITVI Chromosome chr15 scaffold_40, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026928001
           PE=4 SV=1
          Length = 714

 Score = 39.3 bits (90), Expect = 0.19
 Identities = 28/106 (26%), Positives = 51/106 (48%)
 Frame = +3

Query: 240 TRSRFFRTDGREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSL 419
           T S +F   GR+G +++  T P +  A+L    + L   + + +S  S     K R + L
Sbjct: 58  TDSTYF---GRQGATILIYTFPVLFSAVLGCAYLHLGKKLNNNKSKSS----PKDRLAVL 110

Query: 420 NAYPLWVHSPFGVVTMADFLFIIGILFMVFYHFGRVTHLSFQEIEN 557
              P+ V  P G+V+M + LF++  + ++ +         FQ IE+
Sbjct: 111 KR-PVLVKGPLGIVSMIEMLFLVMFIALLVWSIYTYLRTGFQGIED 155


>tr|A5ATI3|A5ATI3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_034719 PE=4 SV=1
          Length = 792

 Score = 39.3 bits (90), Expect = 0.19
 Identities = 28/106 (26%), Positives = 51/106 (48%)
 Frame = +3

Query: 240 TRSRFFRTDGREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSL 419
           T S +F   GR+G +++  T P +  A+L    + L   + + +S  S     K R + L
Sbjct: 58  TDSTYF---GRQGATILIYTFPVLFSAVLGCAYLHLGKKLNNNKSKSS----PKDRLAVL 110

Query: 420 NAYPLWVHSPFGVVTMADFLFIIGILFMVFYHFGRVTHLSFQEIEN 557
              P+ V  P G+V+M + LF++  + ++ +         FQ IE+
Sbjct: 111 KR-PVLVKGPLGIVSMIEMLFLVMFIALLVWSIYTYLRTGFQGIED 155


>tr|Q9LMM2|Q9LMM2_ARATH F22L4.13 protein OS=Arabidopsis thaliana
           GN=At1g01590 PE=4 SV=1
          Length = 704

 Score = 38.1 bits (87), Expect = 0.42
 Identities = 18/95 (18%), Positives = 48/95 (50%)
 Frame = +3

Query: 267 GREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHS 446
           GR G +L+    P +++A L  + + L+      +    ++ +++ +F +L   P+ V+ 
Sbjct: 57  GRPGVNLLVYMFPMILLAFLGCIYLHLKKSTTVNQFNSGVE-KKRAKFGALRR-PMLVNG 114

Query: 447 PFGVVTMADFLFIIGILFMVFYHFGRVTHLSFQEI 551
           P G+VT+ + +F+   + ++ +      + +F  +
Sbjct: 115 PLGIVTVTEVMFLTMFMALLLWSLANYMYRTFVNV 149


>tr|Q94EK6|Q94EK6_PEA Ferric-chelate reductase (Iron reductase)
           OS=Pisum sativum GN=FRO1 PE=2 SV=2
          Length = 712

 Score = 38.1 bits (87), Expect = 0.42
 Identities = 29/127 (22%), Positives = 58/127 (45%)
 Frame = +3

Query: 228 LSKNTRSRFFRTDGREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLR 407
           +   T S +F   G +GF ++  T P +++A L  + I +     +K+S        K  
Sbjct: 53  IQAKTNSTYF---GVQGFRILIYTFPLLLIATLGCVYIHI-----AKKSNQIDNG--KKH 102

Query: 408 FSSLNAYPLWVHSPFGVVTMADFLFIIGILFMVFYHFGRVTHLSFQEIENGTVMHHHGPI 587
            +++   P+ V  P G+V++ +  F++  + ++ +      H  F  I + +    HGP 
Sbjct: 103 ETTIWKRPMLVKGPLGIVSITEIAFLLMFIALLVWTLATYLHNDFSSIAS-SPEEEHGP- 160

Query: 588 VSKQWQK 608
             K WQ+
Sbjct: 161 --KVWQE 165


>tr|P92950|P92950_ARATH FRO1 protein OS=Arabidopsis thaliana GN=FRO1
           PE=4 SV=1
          Length = 704

 Score = 38.1 bits (87), Expect = 0.42
 Identities = 18/95 (18%), Positives = 48/95 (50%)
 Frame = +3

Query: 267 GREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHS 446
           GR G +L+    P +++A L  + + L+      +    ++ +++ +F +L   P+ V+ 
Sbjct: 57  GRPGVNLLVYMFPMILLAFLGCIYLHLKKSTTVNQFNSGVE-KKRAKFGALRR-PMLVNG 114

Query: 447 PFGVVTMADFLFIIGILFMVFYHFGRVTHLSFQEI 551
           P G+VT+ + +F+   + ++ +      + +F  +
Sbjct: 115 PLGIVTVTEVMFLTMFMALLLWSLANYMYRTFVNV 149