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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953676
Clone id TST39A01NGRL0018_G13
Library
Length 595
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_G13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CATCTACAGACGTCGAGAGGGCAAGGCCAGCTAATGGTGGAGGTTGAATGGAAGATAGCT
TCGTTGACACAGGTGCACTAGAAGAGCCCTCTTATCTTCAGCTTCAACTTCATCGCCACT
ACCTCGACCACTACTATCACCCGGCCTTTCTAAGGGCATTTCCATGGCTACTCACAGTCT
TGTCAGCCAACCTGCTGCATTACAGCTCCCTCTTGCAAGCACGAGCGCATGCGCGAAGGT
TGGCGATGGACTCACCCCCACCGCTCTCTTTCACCCTCATGAACTCCCCTTCCATGCGCT
TGGTACGCTACAAAATCAAGCTCCTCAGGTACTCTGCAACCCTGATCTTCTTTCTTCTGT
TTTGGTCTTTCATACCCGAGATTGCGGTCCCCTTGGAAATGGGTTGGGGCACCATTGAAG
CCTCCATTGTGGGCCTCCTTGCCGGCTTCATCACCATCTACTTGAACGAGAAACATGGCC
CTTAATATGAGAAATCCATGGAAACCCGCCATCGATTTTCAGTTGGCAAGCTATGGTTGC
ATGTGGGATATGTTGAGGCTTTTTTCGGTGCAACCCCTGTTGGTCCCCTTTGAAG
■■Homology search results ■■ -
sp_hit_id Q00203
Definition sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM101 OS=Aspergillus niger
Align length 62
Score (bit) 33.5
E-value 0.83
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953676|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_G13, 5'
         (595 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM10...    33   0.83 
sp|P60409|KR107_HUMAN Keratin-associated protein 10-7 OS=Homo sa...    28   1.4  
sp|P60372|KR104_HUMAN Keratin-associated protein 10-4 OS=Homo sa...    27   4.8  
sp|P60410|KR108_HUMAN Keratin-associated protein 10-8 OS=Homo sa...    27   5.0  
sp|P47315|PTG3C_MYCGE PTS system glucose-specific EIICBA compone...    31   5.3  
sp|P43268|ETV4_HUMAN ETS translocation variant 4 OS=Homo sapiens...    30   7.0  
sp|Q9RT91|GUAA_DEIRA GMP synthase [glutamine-hydrolyzing] OS=Dei...    30   7.1  

>sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM101
           OS=Aspergillus niger GN=PACC PE=2 SV=1
          Length = 667

 Score = 33.5 bits (75), Expect = 0.83
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = -1

Query: 424 EASMVPQPISKGTAISGMKDQNRRKKIRVAEYLRSLIL*RTKRMEGEFMRVKESGGGESI 245
           EA    +     T ++   D    +K+R+ EYLR+ I  R +R  GEF    ESGGG S 
Sbjct: 552 EAEATLRTAQAATEVAERADVQWVEKVRLIEYLRNYIASRLER--GEFEN-NESGGGNSS 608

Query: 244 AN 239
           +N
Sbjct: 609 SN 610


>sp|P60409|KR107_HUMAN Keratin-associated protein 10-7 OS=Homo
           sapiens GN=KRTAP10-7 PE=2 SV=2
          Length = 375

 Score = 28.5 bits (62), Expect(2) = 1.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 181 CQPTCCITAPSC 216
           C+PTCC+  PSC
Sbjct: 322 CRPTCCVPVPSC 333



 Score = 23.1 bits (48), Expect(2) = 1.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 178 SCQPTCCITA 207
           SCQP CC T+
Sbjct: 297 SCQPACCTTS 306


>sp|P60372|KR104_HUMAN Keratin-associated protein 10-4 OS=Homo
           sapiens GN=KRTAP10-4 PE=2 SV=1
          Length = 401

 Score = 26.6 bits (57), Expect(2) = 4.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 181 CQPTCCITAPSC 216
           C+P CC+  PSC
Sbjct: 369 CRPACCVPVPSC 380



 Score = 23.1 bits (48), Expect(2) = 4.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 178 SCQPTCCITA 207
           SCQP CC T+
Sbjct: 344 SCQPACCTTS 353


>sp|P60410|KR108_HUMAN Keratin-associated protein 10-8 OS=Homo
           sapiens GN=KRTAP10-8 PE=2 SV=2
          Length = 259

 Score = 26.6 bits (57), Expect(2) = 5.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 181 CQPTCCITAPSC 216
           C+P CC+  PSC
Sbjct: 217 CRPACCVPVPSC 228



 Score = 23.1 bits (48), Expect(2) = 5.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 178 SCQPTCCITA 207
           SCQP CC T+
Sbjct: 192 SCQPACCTTS 201


>sp|P47315|PTG3C_MYCGE PTS system glucose-specific EIICBA component
           OS=Mycoplasma genitalium GN=ptsG PE=3 SV=1
          Length = 908

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 354 LLFWSFIPEIAVPLEMGWGTIEASIV-GLLAGFITIYLNEK 473
           +L+W  +P+ A+   +G  ++  S+  G++ G +T YL  K
Sbjct: 131 ILYWKAVPQSAIASTLGLNSLSTSVFGGIIVGALTAYLYNK 171


>sp|P43268|ETV4_HUMAN ETS translocation variant 4 OS=Homo sapiens
           GN=ETV4 PE=1 SV=3
          Length = 484

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -3

Query: 431 HNGGFNGAPTHFQGDRNLGYERPKQKKEDQGCRVPEELD 315
           H  GF+G P+   G    GYE+P +   D  C VPE+ +
Sbjct: 281 HTEGFSG-PSPGDGAMGYGYEKPLRPFPDDVCVVPEKFE 318


>sp|Q9RT91|GUAA_DEIRA GMP synthase [glutamine-hydrolyzing]
           OS=Deinococcus radiodurans GN=guaA PE=3 SV=1
          Length = 506

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 16/91 (17%)
 Frame = -1

Query: 454 VMKPARRPTMEASMVPQPISKGTA---------ISGMKDQNRRKKIRVAEYLRSLIL*RT 302
           +++   R  +EA++ P  ++  T          ++G+ D  +++KI   E++R+      
Sbjct: 248 LLRLGEREQVEAALTPLGVNLVTVDAKDEFLGQLAGVSDPEQKRKIIGREFIRAFERETA 307

Query: 301 KRMEGEFMR-------VKESGGGESIANLRA 230
           K  + EF+        V ES GGE  AN+++
Sbjct: 308 KLGDFEFLAQGTLYPDVIESAGGEGAANIKS 338
tr_hit_id A9TS26
Definition tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 154
Score (bit) 86.3
E-value 1.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953676|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_G13, 5'
         (595 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella paten...    86   1e-15
tr|Q6SKZ8|Q6SKZ8_9CRUS NADH-ubiquinone oxidoreductase chain 5 OS...    37   0.65 
tr|Q13Y81|Q13Y81_BURXL Major facilitator superfamily (MFS) dicar...    35   3.2  
tr|Q1DL41|Q1DL41_COCIM Predicted protein OS=Coccidioides immitis...    34   5.5  
tr|B2ARF5|B2ARF5_PODAN Predicted CDS Pa_4_7670 OS=Podospora anse...    34   5.6  
tr|A2QDQ1|A2QDQ1_ASPNC Transcription factor pacC-Aspergillus nig...    33   9.5  

>tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_171612 PE=4 SV=1
          Length = 284

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 55/154 (35%), Positives = 75/154 (48%), Gaps = 29/154 (18%)
 Frame = +3

Query: 150 LRAFPWLLTVLSANLLHY-----------------------------SSXXXXXXXXXXX 242
           LR  PW+LT++ ANLLHY                             SS           
Sbjct: 9   LRITPWILTIICANLLHYRSLLDARNENRERVLAQRVTSKQQAKREASSKDAFEFMRKQA 68

Query: 243 XMDSPPPLSFTLMNSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPEIAVPLEMGWGTIEA 422
                  L+F LM SP MR  RYKIKLLRY+AT ++ L F+ FIPE+     + + ++E 
Sbjct: 69  TTSKHELLTFDLMRSPIMRKARYKIKLLRYAATSVYILFFYRFIPELNEAYPVNFFSLEC 128

Query: 423 SIVGLLAGFITIYLNEKHGP*YEKSMETRHRFSV 524
            IVG+L+G IT+YLNE      +++M T  R +V
Sbjct: 129 LIVGILSGLITVYLNENQ----DEAMRTLWRPAV 158



 Score = 34.3 bits (77), Expect = 5.6
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +1

Query: 487 MRNPWKPAIDFQLASYGCMWDMLRLFSVQPLLVPFE 594
           MR  W+PA+DF     G +WD++RL     L VP E
Sbjct: 150 MRTLWRPAVDFGSGFLGDIWDVIRLVGAS-LAVPVE 184


>tr|Q6SKZ8|Q6SKZ8_9CRUS NADH-ubiquinone oxidoreductase chain 5
           OS=Hutchinsoniella macracantha GN=nad5 PE=3 SV=1
          Length = 578

 Score = 37.4 bits (85), Expect = 0.65
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
 Frame = +3

Query: 261 PLSFTLM-NSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPE---IAVPLEMGWGTIEASI 428
           PLS T   N    +++   I LL   AT +  LL W   P    I +PL M   T+   I
Sbjct: 408 PLSLTCSPNDKKNKMMTSPILLLTIMATTVGSLLTWFIFPNPEMICLPLPMKTATLFTII 467

Query: 429 VGLLAGFITIYLNEK 473
           +G+L G I   +N+K
Sbjct: 468 LGMLLGLILSNINQK 482


>tr|Q13Y81|Q13Y81_BURXL Major facilitator superfamily (MFS)
           dicarboxlate/proton symporter OS=Burkholderia xenovorans
           (strain LB400) GN=Bxeno_A2420 PE=4 SV=1
          Length = 434

 Score = 35.0 bits (79), Expect = 3.2
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 405 WGTIEASIVGLLAGFITIYLNEKHGP*YEKSMETRHRFSVGK---LWLHVGYVEAFFGAT 575
           WG     ++G LA  I +YL +        + ETRHR   G    LWLH G      G T
Sbjct: 193 WGWRVPFVIGALAALIALYLRKSLDE--TTTAETRHRKEAGTLRGLWLHKGAFMTVLGFT 250

Query: 576 PVGPL 590
             G L
Sbjct: 251 AGGSL 255


>tr|Q1DL41|Q1DL41_COCIM Predicted protein OS=Coccidioides immitis
           GN=CIMG_08972 PE=4 SV=1
          Length = 168

 Score = 34.3 bits (77), Expect = 5.5
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 26/105 (24%)
 Frame = +3

Query: 273 TLMNSP---------------SMRLVRYKIKLLRYSATLIFFLLFWSFIPEIAVPL-EMG 404
           TL+NSP               S++++ Y  +++ +   L   LLFWS I      + ++G
Sbjct: 56  TLINSPPDLYSILILFFILVISLKVLDYARRVITFWIVLFLRLLFWSAILGGGYYVYKVG 115

Query: 405 WGTIE---ASIVGLLAGFITIYLNE-------KHGP*YEKSMETR 509
           WG      A I+GL+ GFI   L+E       ++GP Y+++ + R
Sbjct: 116 WGKASQDAAWILGLMEGFIQQLLSESDTSTRSRNGPGYKRTGQGR 160


>tr|B2ARF5|B2ARF5_PODAN Predicted CDS Pa_4_7670 OS=Podospora
           anserina PE=4 SV=1
          Length = 559

 Score = 34.3 bits (77), Expect = 5.6
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 251 LTPTALFHPHELPFHALGTLQNQAPQVLCNPDLLSSVLVF 370
           LT +   HPH LP H   T +   P  LC+P  L S+  F
Sbjct: 247 LTTSNNNHPHHLPHHRTSTTRPSVPATLCSPVHLLSIFSF 286


>tr|A2QDQ1|A2QDQ1_ASPNC Transcription factor pacC-Aspergillus niger
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=pacC PE=4 SV=1
          Length = 667

 Score = 33.5 bits (75), Expect = 9.5
 Identities = 23/62 (37%), Positives = 32/62 (51%)
 Frame = -1

Query: 424 EASMVPQPISKGTAISGMKDQNRRKKIRVAEYLRSLIL*RTKRMEGEFMRVKESGGGESI 245
           EA    +     T ++   D    +K+R+ EYLR+ I  R +R  GEF    ESGGG S 
Sbjct: 552 EAEATLRTAQAATEVAERADVQWVEKVRLIEYLRNYIASRLER--GEFEN-NESGGGNSS 608

Query: 244 AN 239
           +N
Sbjct: 609 SN 610