DK953676
Clone id TST39A01NGRL0018_G13
Library
Length 595
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_G13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CATCTACAGACGTCGAGAGGGCAAGGCCAGCTAATGGTGGAGGTTGAATGGAAGATAGCT
TCGTTGACACAGGTGCACTAGAAGAGCCCTCTTATCTTCAGCTTCAACTTCATCGCCACT
ACCTCGACCACTACTATCACCCGGCCTTTCTAAGGGCATTTCCATGGCTACTCACAGTCT
TGTCAGCCAACCTGCTGCATTACAGCTCCCTCTTGCAAGCACGAGCGCATGCGCGAAGGT
TGGCGATGGACTCACCCCCACCGCTCTCTTTCACCCTCATGAACTCCCCTTCCATGCGCT
TGGTACGCTACAAAATCAAGCTCCTCAGGTACTCTGCAACCCTGATCTTCTTTCTTCTGT
TTTGGTCTTTCATACCCGAGATTGCGGTCCCCTTGGAAATGGGTTGGGGCACCATTGAAG
CCTCCATTGTGGGCCTCCTTGCCGGCTTCATCACCATCTACTTGAACGAGAAACATGGCC
CTTAATATGAGAAATCCATGGAAACCCGCCATCGATTTTCAGTTGGCAAGCTATGGTTGC
ATGTGGGATATGTTGAGGCTTTTTTCGGTGCAACCCCTGTTGGTCCCCTTTGAAG
■■Homology search results ■■ -
sp_hit_id Q00203
Definition sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM101 OS=Aspergillus niger
Align length 62
Score (bit) 33.5
E-value 0.83
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953676|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_G13, 5'
(595 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM10... 33 0.83
sp|P60409|KR107_HUMAN Keratin-associated protein 10-7 OS=Homo sa... 28 1.4
sp|P60372|KR104_HUMAN Keratin-associated protein 10-4 OS=Homo sa... 27 4.8
sp|P60410|KR108_HUMAN Keratin-associated protein 10-8 OS=Homo sa... 27 5.0
sp|P47315|PTG3C_MYCGE PTS system glucose-specific EIICBA compone... 31 5.3
sp|P43268|ETV4_HUMAN ETS translocation variant 4 OS=Homo sapiens... 30 7.0
sp|Q9RT91|GUAA_DEIRA GMP synthase [glutamine-hydrolyzing] OS=Dei... 30 7.1

>sp|Q00203|PACC_ASPNG pH-response transcription factor pacC/RIM101
OS=Aspergillus niger GN=PACC PE=2 SV=1
Length = 667

Score = 33.5 bits (75), Expect = 0.83
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -1

Query: 424 EASMVPQPISKGTAISGMKDQNRRKKIRVAEYLRSLIL*RTKRMEGEFMRVKESGGGESI 245
EA + T ++ D +K+R+ EYLR+ I R +R GEF ESGGG S
Sbjct: 552 EAEATLRTAQAATEVAERADVQWVEKVRLIEYLRNYIASRLER--GEFEN-NESGGGNSS 608

Query: 244 AN 239
+N
Sbjct: 609 SN 610


>sp|P60409|KR107_HUMAN Keratin-associated protein 10-7 OS=Homo
sapiens GN=KRTAP10-7 PE=2 SV=2
Length = 375

Score = 28.5 bits (62), Expect(2) = 1.4
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1

Query: 181 CQPTCCITAPSC 216
C+PTCC+ PSC
Sbjct: 322 CRPTCCVPVPSC 333



Score = 23.1 bits (48), Expect(2) = 1.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1

Query: 178 SCQPTCCITA 207
SCQP CC T+
Sbjct: 297 SCQPACCTTS 306


>sp|P60372|KR104_HUMAN Keratin-associated protein 10-4 OS=Homo
sapiens GN=KRTAP10-4 PE=2 SV=1
Length = 401

Score = 26.6 bits (57), Expect(2) = 4.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1

Query: 181 CQPTCCITAPSC 216
C+P CC+ PSC
Sbjct: 369 CRPACCVPVPSC 380



Score = 23.1 bits (48), Expect(2) = 4.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1

Query: 178 SCQPTCCITA 207
SCQP CC T+
Sbjct: 344 SCQPACCTTS 353


>sp|P60410|KR108_HUMAN Keratin-associated protein 10-8 OS=Homo
sapiens GN=KRTAP10-8 PE=2 SV=2
Length = 259

Score = 26.6 bits (57), Expect(2) = 5.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1

Query: 181 CQPTCCITAPSC 216
C+P CC+ PSC
Sbjct: 217 CRPACCVPVPSC 228



Score = 23.1 bits (48), Expect(2) = 5.0
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1

Query: 178 SCQPTCCITA 207
SCQP CC T+
Sbjct: 192 SCQPACCTTS 201


>sp|P47315|PTG3C_MYCGE PTS system glucose-specific EIICBA component
OS=Mycoplasma genitalium GN=ptsG PE=3 SV=1
Length = 908

Score = 30.8 bits (68), Expect = 5.3
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3

Query: 354 LLFWSFIPEIAVPLEMGWGTIEASIV-GLLAGFITIYLNEK 473
+L+W +P+ A+ +G ++ S+ G++ G +T YL K
Sbjct: 131 ILYWKAVPQSAIASTLGLNSLSTSVFGGIIVGALTAYLYNK 171


>sp|P43268|ETV4_HUMAN ETS translocation variant 4 OS=Homo sapiens
GN=ETV4 PE=1 SV=3
Length = 484

Score = 30.4 bits (67), Expect = 7.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3

Query: 431 HNGGFNGAPTHFQGDRNLGYERPKQKKEDQGCRVPEELD 315
H GF+G P+ G GYE+P + D C VPE+ +
Sbjct: 281 HTEGFSG-PSPGDGAMGYGYEKPLRPFPDDVCVVPEKFE 318


>sp|Q9RT91|GUAA_DEIRA GMP synthase [glutamine-hydrolyzing]
OS=Deinococcus radiodurans GN=guaA PE=3 SV=1
Length = 506

Score = 30.4 bits (67), Expect = 7.1
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 16/91 (17%)
Frame = -1

Query: 454 VMKPARRPTMEASMVPQPISKGTA---------ISGMKDQNRRKKIRVAEYLRSLIL*RT 302
+++ R +EA++ P ++ T ++G+ D +++KI E++R+
Sbjct: 248 LLRLGEREQVEAALTPLGVNLVTVDAKDEFLGQLAGVSDPEQKRKIIGREFIRAFERETA 307

Query: 301 KRMEGEFMR-------VKESGGGESIANLRA 230
K + EF+ V ES GGE AN+++
Sbjct: 308 KLGDFEFLAQGTLYPDVIESAGGEGAANIKS 338


tr_hit_id A9TS26
Definition tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 154
Score (bit) 86.3
E-value 1.0e-15
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953676|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_G13, 5'
(595 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella paten... 86 1e-15
tr|Q6SKZ8|Q6SKZ8_9CRUS NADH-ubiquinone oxidoreductase chain 5 OS... 37 0.65
tr|Q13Y81|Q13Y81_BURXL Major facilitator superfamily (MFS) dicar... 35 3.2
tr|Q1DL41|Q1DL41_COCIM Predicted protein OS=Coccidioides immitis... 34 5.5
tr|B2ARF5|B2ARF5_PODAN Predicted CDS Pa_4_7670 OS=Podospora anse... 34 5.6
tr|A2QDQ1|A2QDQ1_ASPNC Transcription factor pacC-Aspergillus nig... 33 9.5

>tr|A9TS26|A9TS26_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_171612 PE=4 SV=1
Length = 284

Score = 86.3 bits (212), Expect = 1e-15
Identities = 55/154 (35%), Positives = 75/154 (48%), Gaps = 29/154 (18%)
Frame = +3

Query: 150 LRAFPWLLTVLSANLLHY-----------------------------SSXXXXXXXXXXX 242
LR PW+LT++ ANLLHY SS
Sbjct: 9 LRITPWILTIICANLLHYRSLLDARNENRERVLAQRVTSKQQAKREASSKDAFEFMRKQA 68

Query: 243 XMDSPPPLSFTLMNSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPEIAVPLEMGWGTIEA 422
L+F LM SP MR RYKIKLLRY+AT ++ L F+ FIPE+ + + ++E
Sbjct: 69 TTSKHELLTFDLMRSPIMRKARYKIKLLRYAATSVYILFFYRFIPELNEAYPVNFFSLEC 128

Query: 423 SIVGLLAGFITIYLNEKHGP*YEKSMETRHRFSV 524
IVG+L+G IT+YLNE +++M T R +V
Sbjct: 129 LIVGILSGLITVYLNENQ----DEAMRTLWRPAV 158



Score = 34.3 bits (77), Expect = 5.6
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1

Query: 487 MRNPWKPAIDFQLASYGCMWDMLRLFSVQPLLVPFE 594
MR W+PA+DF G +WD++RL L VP E
Sbjct: 150 MRTLWRPAVDFGSGFLGDIWDVIRLVGAS-LAVPVE 184


>tr|Q6SKZ8|Q6SKZ8_9CRUS NADH-ubiquinone oxidoreductase chain 5
OS=Hutchinsoniella macracantha GN=nad5 PE=3 SV=1
Length = 578

Score = 37.4 bits (85), Expect = 0.65
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +3

Query: 261 PLSFTLM-NSPSMRLVRYKIKLLRYSATLIFFLLFWSFIPE---IAVPLEMGWGTIEASI 428
PLS T N +++ I LL AT + LL W P I +PL M T+ I
Sbjct: 408 PLSLTCSPNDKKNKMMTSPILLLTIMATTVGSLLTWFIFPNPEMICLPLPMKTATLFTII 467

Query: 429 VGLLAGFITIYLNEK 473
+G+L G I +N+K
Sbjct: 468 LGMLLGLILSNINQK 482


>tr|Q13Y81|Q13Y81_BURXL Major facilitator superfamily (MFS)
dicarboxlate/proton symporter OS=Burkholderia xenovorans
(strain LB400) GN=Bxeno_A2420 PE=4 SV=1
Length = 434

Score = 35.0 bits (79), Expect = 3.2
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +3

Query: 405 WGTIEASIVGLLAGFITIYLNEKHGP*YEKSMETRHRFSVGK---LWLHVGYVEAFFGAT 575
WG ++G LA I +YL + + ETRHR G LWLH G G T
Sbjct: 193 WGWRVPFVIGALAALIALYLRKSLDE--TTTAETRHRKEAGTLRGLWLHKGAFMTVLGFT 250

Query: 576 PVGPL 590
G L
Sbjct: 251 AGGSL 255


>tr|Q1DL41|Q1DL41_COCIM Predicted protein OS=Coccidioides immitis
GN=CIMG_08972 PE=4 SV=1
Length = 168

Score = 34.3 bits (77), Expect = 5.5
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 26/105 (24%)
Frame = +3

Query: 273 TLMNSP---------------SMRLVRYKIKLLRYSATLIFFLLFWSFIPEIAVPL-EMG 404
TL+NSP S++++ Y +++ + L LLFWS I + ++G
Sbjct: 56 TLINSPPDLYSILILFFILVISLKVLDYARRVITFWIVLFLRLLFWSAILGGGYYVYKVG 115

Query: 405 WGTIE---ASIVGLLAGFITIYLNE-------KHGP*YEKSMETR 509
WG A I+GL+ GFI L+E ++GP Y+++ + R
Sbjct: 116 WGKASQDAAWILGLMEGFIQQLLSESDTSTRSRNGPGYKRTGQGR 160


>tr|B2ARF5|B2ARF5_PODAN Predicted CDS Pa_4_7670 OS=Podospora
anserina PE=4 SV=1
Length = 559

Score = 34.3 bits (77), Expect = 5.6
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2

Query: 251 LTPTALFHPHELPFHALGTLQNQAPQVLCNPDLLSSVLVF 370
LT + HPH LP H T + P LC+P L S+ F
Sbjct: 247 LTTSNNNHPHHLPHHRTSTTRPSVPATLCSPVHLLSIFSF 286


>tr|A2QDQ1|A2QDQ1_ASPNC Transcription factor pacC-Aspergillus niger
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=pacC PE=4 SV=1
Length = 667

Score = 33.5 bits (75), Expect = 9.5
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = -1

Query: 424 EASMVPQPISKGTAISGMKDQNRRKKIRVAEYLRSLIL*RTKRMEGEFMRVKESGGGESI 245
EA + T ++ D +K+R+ EYLR+ I R +R GEF ESGGG S
Sbjct: 552 EAEATLRTAQAATEVAERADVQWVEKVRLIEYLRNYIASRLER--GEFEN-NESGGGNSS 608

Query: 244 AN 239
+N
Sbjct: 609 SN 610