DK953679 |
Clone id |
TST39A01NGRL0018_G16 |
Library |
TST39 |
Length |
554 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_G16. 5' end sequence. |
Accession |
DK953679 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL7Contig8 |
Sequence |
CGACGAGCTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGTGGGAGAGAGAGAGAGAGAG ATGGCTTCCAGTAAGGGCATAGTCGCACTGTTCCTGGTGCTCATGGTCTCTTTGGCCGGA CTGATGGGTGCCGCCGCGCAGCCTCCTCCTCCGGCTCTGCAGTGCACTCCCCTGCTAAAC CTTGTGCCGGCTTGCCAGGCTTTAACTCTCTTCCCCGCCCTTGCCCCAGTGCTCACCTCC GTCTGCTGCAACGCTCTCTCCACCGCCAACCTCCTGGGCGTAGGACTGGGTCCCAACGCC ATCTGCCTCTGCGTGAAGCTCACCTTGCCCAACCTATCGCTCACCACCTGCCCTGGCCTC AGCATCGACCTCGCCCGCATCATCTTCGGCTCCAACGGAAGCTGCGTCTGATCTCCTACA TCGTCAGCCTGCAGCAGCTTCATGCAGTTCTGTTCATGTCTTGTTGTATTTCTGTATGCG GATTTTATGTTCTCCGCCATGCTAGCTCGTTTCTGTACTACCTTGTAAATTTGGAATTGA TGCTTTTGTTCTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8K3T3 |
Definition |
sp|Q8K3T3|PER1_SPAJD Period circadian protein homolog 1 OS=Spalax judaei |
Align length |
38 |
Score (bit) |
32.0 |
E-value |
2.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q3JSX2 |
Definition |
tr|Q3JSX2|Q3JSX2_BURP1 Putative uncharacterized protein OS=Burkholderia pseudomallei (strain 1710b) |
Align length |
75 |
Score (bit) |
35.4 |
E-value |
2.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953679|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_G16, 5' (554 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q3JSX2|Q3JSX2_BURP1 Putative uncharacterized protein OS=Burkh... 35 2.0 tr|Q0F377|Q0F377_9PROT TraG OS=Mariprofundus ferrooxydans PV-1 G... 35 2.0 tr|B1XZJ9|B1XZJ9_LEPCP Putative metal dependent phosphohydrolase... 34 6.0 tr|B7P201|B7P201_IXOSC Ran GTPase-activating protein, putative O... 34 6.0 tr|B2GI14|B2GI14_KOCRD Two-component histidine kinase OS=Kocuria... 33 7.8 tr|B4FTS4|B4FTS4_MAIZE Putative uncharacterized protein OS=Zea m... 33 7.8 tr|B7PKX0|B7PKX0_IXOSC Secreted protein, putative OS=Ixodes scap... 33 7.8 tr|A4QVP0|A4QVP0_MAGGR Putative uncharacterized protein OS=Magna... 33 7.8
>tr|Q3JSX2|Q3JSX2_BURP1 Putative uncharacterized protein OS=Burkholderia pseudomallei (strain 1710b) GN=BURPS1710b_1933 PE=4 SV=1 Length = 1038
Score = 35.4 bits (80), Expect = 2.0 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 5/75 (6%) Frame = -3
Query: 276 QEVGGGESVAADGGEHWGK-----GGEES*SLASRHKV*QGSALQSRRRRLRGGTHQSGQ 112 + G G A DG E G+ GG + RH+ G RRR G ++G Sbjct: 582 ERAGDGRHEAGDGRERAGRARRAAGGAGECAGDRRHEARDGRERARRRRAAGGAGERAGD 641
Query: 111 RDHEHQEQCDYALTG 67 R H+ +E+C+ G Sbjct: 642 RRHDVRERCERGARG 656
>tr|Q0F377|Q0F377_9PROT TraG OS=Mariprofundus ferrooxydans PV-1 GN=SPV1_04568 PE=4 SV=1 Length = 974
Score = 35.4 bits (80), Expect = 2.0 Identities = 22/66 (33%), Positives = 28/66 (42%) Frame = -1
Query: 434 LQADDVGDQTQLPLEPKMMRARSMLRPGQVVSDRLGKVSFTQRQMALGPSPTPRRLAVER 255 + D GD E +M A L PG VSD G V QR+ L PS P V++ Sbjct: 790 MDIDIDGDGRVAGWEAEMQEATGTLEPGHRVSDPTGTVDHKQREADLDPSKQPALPHVDQ 849
Query: 254 ALQQTE 237 + E Sbjct: 850 KISDAE 855
>tr|B1XZJ9|B1XZJ9_LEPCP Putative metal dependent phosphohydrolase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=Lcho_4311 PE=4 SV=1 Length = 408
Score = 33.9 bits (76), Expect = 6.0 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = -1
Query: 398 PLEPKMMRARSMLRPGQVVSDRLGKVSFTQRQMALGPSPTPRRLAVERALQQTE 237 P+ M+RA + PG VV R G+++ R+ A GP+P ++ R + E Sbjct: 299 PIATAMLRAIGIFPPGDVVQLRSGEIAVVTRRAAKGPAPLAASVSNARGVPVLE 352
>tr|B7P201|B7P201_IXOSC Ran GTPase-activating protein, putative OS=Ixodes scapularis GN=IscW_ISCW016093 PE=4 SV=1 Length = 527
Score = 33.9 bits (76), Expect = 6.0 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = +1
Query: 217 ALAPVLTSVCCNALSTANLLGVGLGPNAICLCVKLTLPNLSLTTCPGLSIDLARIIFGSN 396 AL P+L+S CC L T L GLGP L K L+ + G + L ++ G N Sbjct: 132 ALVPLLSSPCCFQLKTLLLNNNGLGPGGAELLAKALGACLAESRKAGTPLQLRTLVCGRN 191
>tr|B2GI14|B2GI14_KOCRD Two-component histidine kinase OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 12708 / DC2201) GN=KRH_21790 PE=4 SV=1 Length = 400
Score = 33.5 bits (75), Expect = 7.8 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Frame = +1
Query: 190 ACQALTLFPALAPVLTSVCCNALSTANLLGVGLGPNAICL----CVKLTLPNLSLT 345 AC F + PV T+ C ALS LL + + P +CL CV T LS T Sbjct: 49 ACWIPLFFRRVNPVATAYCVGALSLLGLLVLNVAPIGLCLWAVPCVVYTAAKLSPT 104
>tr|B4FTS4|B4FTS4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 251
Score = 33.5 bits (75), Expect = 7.8 Identities = 21/63 (33%), Positives = 27/63 (42%) Frame = -3
Query: 318 LHAEADGVGTQSYAQEVGGGESVAADGGEHWGKGGEES*SLASRHKV*QGSALQSRRRRL 139 ++ DG GT GGG S +A G GG +S S +SRRRR+ Sbjct: 184 VYVTTDGNGTTDAGDADGGGGSPSAGSGSSGSSGGSKS-----------TSGAESRRRRM 232
Query: 138 RGG 130 GG Sbjct: 233 TGG 235
>tr|B7PKX0|B7PKX0_IXOSC Secreted protein, putative OS=Ixodes scapularis GN=IscW_ISCW005695 PE=4 SV=1 Length = 235
Score = 33.5 bits (75), Expect = 7.8 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 13/49 (26%) Frame = +1
Query: 277 GVGLGPNAICLCVKLTLPNL---------SLTTCP----GLSIDLARII 384 G+ + P+A C+ +TLPN+ +L TCP GL +DLARI+ Sbjct: 14 GLLISPSANAKCINVTLPNVLNLGSCLGPTLVTCPDTSDGLLVDLARIL 62
>tr|A4QVP0|A4QVP0_MAGGR Putative uncharacterized protein OS=Magnaporthe grisea GN=MGG_04405 PE=4 SV=1 Length = 654
Score = 33.5 bits (75), Expect = 7.8 Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 5/107 (4%) Frame = -1
Query: 494 ENIKSAYRNTTRHEQNCMKLLQADDVGDQTQLP-LEPKMMRARSMLRPGQVVSDRLGKVS 318 EN++ R ++R +Q + A + D P L +A S + G+ S K Sbjct: 316 ENLRPRSRPSSRQQQRKEPVQTAPSLDDAEAFPSLGAASAKATSKKQHGKRSSQGHHKEG 375
Query: 317 FTQRQMA----LGPSPTPRRLAVERALQQTEVSTGARAGKRVKAWQA 189 +A + PSPTP V R + +T ST R G+ A Q+ Sbjct: 376 LISSSLADIVKMSPSPTPEAKLVSRKMGRTVSSTSIRNGENSAAAQS 422
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