DK953679
Clone id TST39A01NGRL0018_G16
Library
Length 554
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_G16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CGACGAGCTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGTGGGAGAGAGAGAGAGAGAG
ATGGCTTCCAGTAAGGGCATAGTCGCACTGTTCCTGGTGCTCATGGTCTCTTTGGCCGGA
CTGATGGGTGCCGCCGCGCAGCCTCCTCCTCCGGCTCTGCAGTGCACTCCCCTGCTAAAC
CTTGTGCCGGCTTGCCAGGCTTTAACTCTCTTCCCCGCCCTTGCCCCAGTGCTCACCTCC
GTCTGCTGCAACGCTCTCTCCACCGCCAACCTCCTGGGCGTAGGACTGGGTCCCAACGCC
ATCTGCCTCTGCGTGAAGCTCACCTTGCCCAACCTATCGCTCACCACCTGCCCTGGCCTC
AGCATCGACCTCGCCCGCATCATCTTCGGCTCCAACGGAAGCTGCGTCTGATCTCCTACA
TCGTCAGCCTGCAGCAGCTTCATGCAGTTCTGTTCATGTCTTGTTGTATTTCTGTATGCG
GATTTTATGTTCTCCGCCATGCTAGCTCGTTTCTGTACTACCTTGTAAATTTGGAATTGA
TGCTTTTGTTCTCT
■■Homology search results ■■ -
sp_hit_id Q8K3T3
Definition sp|Q8K3T3|PER1_SPAJD Period circadian protein homolog 1 OS=Spalax judaei
Align length 38
Score (bit) 32.0
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953679|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_G16, 5'
(554 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8K3T3|PER1_SPAJD Period circadian protein homolog 1 OS=Spala... 32 2.1
sp|Q93Z00|TCP14_ARATH Transcription factor TCP14 OS=Arabidopsis ... 32 2.7
sp|Q2VIS4|FILA2_MOUSE Filaggrin-2 OS=Mus musculus GN=Flg2 PE=2 SV=2 31 3.5
sp|O15534|PER1_HUMAN Period circadian protein homolog 1 OS=Homo ... 30 7.9

>sp|Q8K3T3|PER1_SPAJD Period circadian protein homolog 1 OS=Spalax
judaei GN=PER1 PE=2 SV=1
Length = 1285

Score = 32.0 bits (71), Expect = 2.1
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3

Query: 318 LHAEADGVGTQSYAQEVGGGESVAADGGEHWGKGGEES 205
L +E DG+G + E GGGE GG G+GGEE+
Sbjct: 1212 LFSELDGLGLEP--MEEGGGEGGGGGGGGGEGEGGEEA 1247


>sp|Q93Z00|TCP14_ARATH Transcription factor TCP14 OS=Arabidopsis
thaliana GN=TCP14 PE=2 SV=1
Length = 489

Score = 31.6 bits (70), Expect = 2.7
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Frame = -3

Query: 282 YAQEVGGGESVAADGGEHWGK--------GGEES*SLASRHKV*QGSALQSRRRRLRGGT 127
Y V G S A G H+ G++ + S H++ + S R GG
Sbjct: 381 YRSGVSGVPSGAVSSGLHFMNFAAPMAFLTGQQQLATTSNHEINEDSNNNEGGRSDGGGD 440

Query: 126 HQSGQRDHEHQEQ 88
H + QR H HQ+Q
Sbjct: 441 HHNTQRHHHHQQQ 453


>sp|Q2VIS4|FILA2_MOUSE Filaggrin-2 OS=Mus musculus GN=Flg2 PE=2 SV=2
Length = 2362

Score = 31.2 bits (69), Expect = 3.5
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = -3

Query: 285 SYAQEVGGGESVAADGGEHWGKGGEES*S----LASRHKV*QGSALQSRRRRLRGGTHQS 118
S +Q+ GGG + GEH G S S SRH G R + G H S
Sbjct: 577 SGSQQHGGGSGQSTGFGEHESSSGHSSSSGQHRSGSRHSSGSGKHESGRSQSSGSGHHGS 636

Query: 117 GQRDH 103
G + H
Sbjct: 637 GSQQH 641


>sp|O15534|PER1_HUMAN Period circadian protein homolog 1 OS=Homo
sapiens GN=PER1 PE=1 SV=2
Length = 1290

Score = 30.0 bits (66), Expect = 7.9
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3

Query: 318 LHAEADGVGTQSYAQEVGGGESVAADGGEHWGKGGEES 205
L +E DG+G + E GGGE ++ GG G+G EE+
Sbjct: 1219 LFSELDGLGLEP--MEEGGGEQGSSGGGSGEGEGCEEA 1254


tr_hit_id Q3JSX2
Definition tr|Q3JSX2|Q3JSX2_BURP1 Putative uncharacterized protein OS=Burkholderia pseudomallei (strain 1710b)
Align length 75
Score (bit) 35.4
E-value 2.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953679|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_G16, 5'
(554 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q3JSX2|Q3JSX2_BURP1 Putative uncharacterized protein OS=Burkh... 35 2.0
tr|Q0F377|Q0F377_9PROT TraG OS=Mariprofundus ferrooxydans PV-1 G... 35 2.0
tr|B1XZJ9|B1XZJ9_LEPCP Putative metal dependent phosphohydrolase... 34 6.0
tr|B7P201|B7P201_IXOSC Ran GTPase-activating protein, putative O... 34 6.0
tr|B2GI14|B2GI14_KOCRD Two-component histidine kinase OS=Kocuria... 33 7.8
tr|B4FTS4|B4FTS4_MAIZE Putative uncharacterized protein OS=Zea m... 33 7.8
tr|B7PKX0|B7PKX0_IXOSC Secreted protein, putative OS=Ixodes scap... 33 7.8
tr|A4QVP0|A4QVP0_MAGGR Putative uncharacterized protein OS=Magna... 33 7.8

>tr|Q3JSX2|Q3JSX2_BURP1 Putative uncharacterized protein
OS=Burkholderia pseudomallei (strain 1710b)
GN=BURPS1710b_1933 PE=4 SV=1
Length = 1038

Score = 35.4 bits (80), Expect = 2.0
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = -3

Query: 276 QEVGGGESVAADGGEHWGK-----GGEES*SLASRHKV*QGSALQSRRRRLRGGTHQSGQ 112
+ G G A DG E G+ GG + RH+ G RRR G ++G
Sbjct: 582 ERAGDGRHEAGDGRERAGRARRAAGGAGECAGDRRHEARDGRERARRRRAAGGAGERAGD 641

Query: 111 RDHEHQEQCDYALTG 67
R H+ +E+C+ G
Sbjct: 642 RRHDVRERCERGARG 656


>tr|Q0F377|Q0F377_9PROT TraG OS=Mariprofundus ferrooxydans PV-1
GN=SPV1_04568 PE=4 SV=1
Length = 974

Score = 35.4 bits (80), Expect = 2.0
Identities = 22/66 (33%), Positives = 28/66 (42%)
Frame = -1

Query: 434 LQADDVGDQTQLPLEPKMMRARSMLRPGQVVSDRLGKVSFTQRQMALGPSPTPRRLAVER 255
+ D GD E +M A L PG VSD G V QR+ L PS P V++
Sbjct: 790 MDIDIDGDGRVAGWEAEMQEATGTLEPGHRVSDPTGTVDHKQREADLDPSKQPALPHVDQ 849

Query: 254 ALQQTE 237
+ E
Sbjct: 850 KISDAE 855


>tr|B1XZJ9|B1XZJ9_LEPCP Putative metal dependent phosphohydrolase
OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 /
SP-6) GN=Lcho_4311 PE=4 SV=1
Length = 408

Score = 33.9 bits (76), Expect = 6.0
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -1

Query: 398 PLEPKMMRARSMLRPGQVVSDRLGKVSFTQRQMALGPSPTPRRLAVERALQQTE 237
P+ M+RA + PG VV R G+++ R+ A GP+P ++ R + E
Sbjct: 299 PIATAMLRAIGIFPPGDVVQLRSGEIAVVTRRAAKGPAPLAASVSNARGVPVLE 352


>tr|B7P201|B7P201_IXOSC Ran GTPase-activating protein, putative
OS=Ixodes scapularis GN=IscW_ISCW016093 PE=4 SV=1
Length = 527

Score = 33.9 bits (76), Expect = 6.0
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +1

Query: 217 ALAPVLTSVCCNALSTANLLGVGLGPNAICLCVKLTLPNLSLTTCPGLSIDLARIIFGSN 396
AL P+L+S CC L T L GLGP L K L+ + G + L ++ G N
Sbjct: 132 ALVPLLSSPCCFQLKTLLLNNNGLGPGGAELLAKALGACLAESRKAGTPLQLRTLVCGRN 191


>tr|B2GI14|B2GI14_KOCRD Two-component histidine kinase OS=Kocuria
rhizophila (strain ATCC 9341 / DSM 348 / NBRC 12708 /
DC2201) GN=KRH_21790 PE=4 SV=1
Length = 400

Score = 33.5 bits (75), Expect = 7.8
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +1

Query: 190 ACQALTLFPALAPVLTSVCCNALSTANLLGVGLGPNAICL----CVKLTLPNLSLT 345
AC F + PV T+ C ALS LL + + P +CL CV T LS T
Sbjct: 49 ACWIPLFFRRVNPVATAYCVGALSLLGLLVLNVAPIGLCLWAVPCVVYTAAKLSPT 104


>tr|B4FTS4|B4FTS4_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 251

Score = 33.5 bits (75), Expect = 7.8
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = -3

Query: 318 LHAEADGVGTQSYAQEVGGGESVAADGGEHWGKGGEES*SLASRHKV*QGSALQSRRRRL 139
++ DG GT GGG S +A G GG +S S +SRRRR+
Sbjct: 184 VYVTTDGNGTTDAGDADGGGGSPSAGSGSSGSSGGSKS-----------TSGAESRRRRM 232

Query: 138 RGG 130
GG
Sbjct: 233 TGG 235


>tr|B7PKX0|B7PKX0_IXOSC Secreted protein, putative OS=Ixodes
scapularis GN=IscW_ISCW005695 PE=4 SV=1
Length = 235

Score = 33.5 bits (75), Expect = 7.8
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 13/49 (26%)
Frame = +1

Query: 277 GVGLGPNAICLCVKLTLPNL---------SLTTCP----GLSIDLARII 384
G+ + P+A C+ +TLPN+ +L TCP GL +DLARI+
Sbjct: 14 GLLISPSANAKCINVTLPNVLNLGSCLGPTLVTCPDTSDGLLVDLARIL 62


>tr|A4QVP0|A4QVP0_MAGGR Putative uncharacterized protein
OS=Magnaporthe grisea GN=MGG_04405 PE=4 SV=1
Length = 654

Score = 33.5 bits (75), Expect = 7.8
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Frame = -1

Query: 494 ENIKSAYRNTTRHEQNCMKLLQADDVGDQTQLP-LEPKMMRARSMLRPGQVVSDRLGKVS 318
EN++ R ++R +Q + A + D P L +A S + G+ S K
Sbjct: 316 ENLRPRSRPSSRQQQRKEPVQTAPSLDDAEAFPSLGAASAKATSKKQHGKRSSQGHHKEG 375

Query: 317 FTQRQMA----LGPSPTPRRLAVERALQQTEVSTGARAGKRVKAWQA 189
+A + PSPTP V R + +T ST R G+ A Q+
Sbjct: 376 LISSSLADIVKMSPSPTPEAKLVSRKMGRTVSSTSIRNGENSAAAQS 422