DK953704 |
Clone id |
TST39A01NGRL0018_H19 |
Library |
TST39 |
Length |
592 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_H19. 5' end sequence. |
Accession |
DK953704 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL367Contig1 |
Sequence |
CCCTCTTGCCCTCTCTACCCCCCCTACACAGACAAATAGCGCTCACACGAAACCAACGTG CACACGCAGATCGTTGCTGTGAGTGAACAATCTTGTACTCAGACTACGCGTTTGACGATG GCTACTGTGGGCACCAACAACATGCAGGCGAAACTGGTGTTACTGGGAGACATGGGTGCT GGCAAATCAAGTTTGGTGTTACGTTTTGTCAAGGGACAATTTCAGGAGTTCCAGGAATCG ACAATTGGTGCTGCTTTTTTCTCTCAAACAGTTGCTGTGAATGAGACCACAGTAAAATTT GAAATTTGGGATACAGCTGGACAAGAGAGATATCATAGCTTGGCTCCTATGTACTATCGA GGAGCTGCTGCGGCAATTATTGTGTTTGACATCACCAATAATGATTCATTCGTTCGTGCA AAGAAGTGGGTGCAAGAGCTTCAGAGACAAGGTAACGAGAATCTTGTTATGGCTCTTGCT GGGAACAAATCAGACTTAGCTTCAAAGAGGAAGGTTGAAACAGAGGAAGCACAAACCTAT GCTGAAGAAAATGGGCTGTTCTACTTGGAGACCTCAGCTAAAAGTGCTCAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P31583 |
Definition |
sp|P31583|RHN1_NICPL Ras-related protein RHN1 OS=Nicotiana plumbaginifolia |
Align length |
157 |
Score (bit) |
257.0 |
E-value |
4.0e-68 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKR1 |
Definition |
tr|A9NKR1|A9NKR1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
158 |
Score (bit) |
275.0 |
E-value |
1.0e-72 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953704|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_H19, 5' (592 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKR1|A9NKR1_PICSI Putative uncharacterized protein OS=Picea... 275 1e-72 tr|A9TLP5|A9TLP5_PHYPA Rab5/RabF-family small GTPase OS=Physcomi... 272 1e-71 tr|Q41668|Q41668_VICFA Guanine nucleotide regulatory protein OS=... 268 1e-70 tr|A9STK1|A9STK1_PHYPA Rab5/RabF-family small GTPase OS=Physcomi... 268 2e-70 tr|Q9AW99|Q9AW99_9ASTR GTP binding protein OS=Cichorium intybus ... 266 5e-70 tr|Q40209|Q40209_LOTJA RAB5A OS=Lotus japonicus GN=rab5A PE=2 SV=1 266 7e-70 tr|Q9SBU1|Q9SBU1_9ASTR GTP binding protein (Fragment) OS=Cichori... 265 1e-69 tr|Q9AWA0|Q9AWA0_9ASTR GTP binding protein OS=Cichorium intybus ... 265 1e-69 tr|A5AX18|A5AX18_VITVI Putative uncharacterized protein (Chromos... 265 2e-69 tr|A9NPA2|A9NPA2_PICSI Putative uncharacterized protein OS=Picea... 264 2e-69 tr|Q9SBU0|Q9SBU0_9ASTR GTP binding protein (Fragment) OS=Cichori... 264 3e-69 tr|B8LP42|B8LP42_PICSI Putative uncharacterized protein OS=Picea... 262 1e-68 tr|Q40570|Q40570_TOBAC Ras-related GTP-binding protein OS=Nicoti... 259 1e-67 tr|Q9AWA1|Q9AWA1_9ASTR GTP binding protein (Fragment) OS=Cichori... 257 4e-67 tr|Q9AWA2|Q9AWA2_9ASTR GTP binding protein (Fragment) OS=Cichori... 256 9e-67 tr|Q9SN68|Q9SN68_ARATH AT4g19640/F24J7_190 OS=Arabidopsis thalia... 254 3e-66 tr|A9P9C3|A9P9C3_POPTR Putative uncharacterized protein OS=Popul... 252 1e-65 tr|Q84RR9|Q84RR9_SIMCH Rab-related small GTP-binding protein OS=... 249 8e-65 tr|Q75HA2|Q75HA2_ORYSJ Os03g0666500 protein OS=Oryza sativa subs... 244 3e-63 tr|Q9FEV1|Q9FEV1_ORYSA RAB5A protein OS=Oryza sativa GN=rab5A PE... 243 5e-63 tr|Q2QLR7|Q2QLR7_ORYSJ Ras-related protein RHN1, putative, expre... 243 5e-63 tr|Q0ILQ6|Q0ILQ6_ORYSJ Os12g0631100 protein OS=Oryza sativa subs... 243 5e-63 tr|B8BN53|B8BN53_ORYSI Putative uncharacterized protein OS=Oryza... 243 5e-63 tr|B4F944|B4F944_MAIZE Putative uncharacterized protein OS=Zea m... 243 5e-63 tr|A3CJQ0|A3CJQ0_ORYSJ Putative uncharacterized protein OS=Oryza... 243 5e-63 tr|B4F7V6|B4F7V6_MAIZE Putative uncharacterized protein OS=Zea m... 243 6e-63 tr|A7PER1|A7PER1_VITVI Chromosome chr11 scaffold_13, whole genom... 243 8e-63 tr|Q94IR3|Q94IR3_ORYSA Small GTP-binding protein OS=Oryza sativa... 242 1e-62 tr|B6SU67|B6SU67_MAIZE Ras-related protein RHN1 OS=Zea mays PE=2... 241 2e-62 tr|Q9XEN4|Q9XEN4_WHEAT Small GTP-binding protein OS=Triticum aes... 239 7e-62
>tr|A9NKR1|A9NKR1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 200
Score = 275 bits (704), Expect = 1e-72 Identities = 136/158 (86%), Positives = 150/158 (94%) Frame = +1
Query: 118 MATVGTNNMQAKLVLLGDMGAGKSSLVLRFVKGQFQEFQESTIGAAFFSQTVAVNETTVK 297 MAT GTNNMQAKLVLLGDMG GKSSLVLRFVKGQF ++QESTIGAAFFSQT+AVNE TVK Sbjct: 1 MATTGTNNMQAKLVLLGDMGTGKSSLVLRFVKGQFLDYQESTIGAAFFSQTLAVNEVTVK 60
Query: 298 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNNDSFVRAKKWVQELQRQGNENLVMAL 477 FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITN+DSFVRAK WV ELQ+QGN NLVMAL Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNSDSFVRAKNWVLELQKQGNPNLVMAL 120
Query: 478 AGNKSDLASKRKVETEEAQTYAEENGLFYLETSAKSAQ 591 AGNK+D+A+KRKVE EEA+TYA+ENGLF++ETSAK+AQ Sbjct: 121 AGNKADVAAKRKVEAEEAETYAKENGLFFMETSAKTAQ 158
>tr|A9TLP5|A9TLP5_PHYPA Rab5/RabF-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabF2A2 PE=3 SV=1 Length = 201
Score = 272 bits (695), Expect = 1e-71 Identities = 134/158 (84%), Positives = 149/158 (94%) Frame = +1
Query: 118 MATVGTNNMQAKLVLLGDMGAGKSSLVLRFVKGQFQEFQESTIGAAFFSQTVAVNETTVK 297 MAT G N+MQAKLVLLGDMGAGKSSL LRFVKGQF ++QESTIGAAF +QT+AVNETTVK Sbjct: 1 MATTGANHMQAKLVLLGDMGAGKSSLALRFVKGQFFDYQESTIGAAFLTQTLAVNETTVK 60
Query: 298 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNNDSFVRAKKWVQELQRQGNENLVMAL 477 FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITN+DSF RAKKWVQELQRQGN NLVMAL Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNSDSFGRAKKWVQELQRQGNPNLVMAL 120
Query: 478 AGNKSDLASKRKVETEEAQTYAEENGLFYLETSAKSAQ 591 AGNK+DL+SKRK+E EE Q+YAEENGLF++ETSAK++Q Sbjct: 121 AGNKADLSSKRKIEAEEGQSYAEENGLFFMETSAKTSQ 158
>tr|Q41668|Q41668_VICFA Guanine nucleotide regulatory protein OS=Vicia faba PE=2 SV=1 Length = 200
Score = 268 bits (686), Expect = 1e-70 Identities = 133/157 (84%), Positives = 145/157 (92%) Frame = +1
Query: 118 MATVGTNNMQAKLVLLGDMGAGKSSLVLRFVKGQFQEFQESTIGAAFFSQTVAVNETTVK 297 MAT+G NN+ AKLVLLGDMGAGKSSLVLRFVKGQF EFQESTIGAAFFSQT+AVN+ TVK Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 298 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNNDSFVRAKKWVQELQRQGNENLVMAL 477 FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DIT++DSF RAKKWVQELQ+QGN N+VMAL Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAL 120
Query: 478 AGNKSDLASKRKVETEEAQTYAEENGLFYLETSAKSA 588 GNKSDL KRKV EEA+ YAEENGLF++ETSAKSA Sbjct: 121 TGNKSDLEDKRKVTAEEARVYAEENGLFFMETSAKSA 157
>tr|A9STK1|A9STK1_PHYPA Rab5/RabF-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabF2A1 PE=3 SV=1 Length = 201
Score = 268 bits (685), Expect = 2e-70 Identities = 133/158 (84%), Positives = 148/158 (93%) Frame = +1
Query: 118 MATVGTNNMQAKLVLLGDMGAGKSSLVLRFVKGQFQEFQESTIGAAFFSQTVAVNETTVK 297 MAT G N+ QAKLVLLGDMGAGKSSL LRFV+GQF ++QESTIGAAF +QT+AVNETTVK Sbjct: 1 MATTGANHTQAKLVLLGDMGAGKSSLSLRFVRGQFFDYQESTIGAAFLTQTLAVNETTVK 60
Query: 298 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNNDSFVRAKKWVQELQRQGNENLVMAL 477 FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITN+DSF RAKKWVQELQRQGN NLVMAL Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNSDSFGRAKKWVQELQRQGNPNLVMAL 120
Query: 478 AGNKSDLASKRKVETEEAQTYAEENGLFYLETSAKSAQ 591 AGNK+DL++KRKVE EE Q+YAEENGLF++ETSAK+AQ Sbjct: 121 AGNKADLSAKRKVEAEEGQSYAEENGLFFMETSAKTAQ 158
>tr|Q9AW99|Q9AW99_9ASTR GTP binding protein OS=Cichorium intybus x Cichorium endivia GN=chi3154 PE=2 SV=1 Length = 200
Score = 266 bits (681), Expect = 5e-70 Identities = 132/157 (84%), Positives = 145/157 (92%) Frame = +1
Query: 118 MATVGTNNMQAKLVLLGDMGAGKSSLVLRFVKGQFQEFQESTIGAAFFSQTVAVNETTVK 297 MAT+G NN+ AKLVLLGDMGAGKSSLVLRFVKGQF EFQESTIGAAFFSQT+AVN+ TVK Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 298 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNNDSFVRAKKWVQELQRQGNENLVMAL 477 FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DIT+ DSF RAKKWVQELQ+QGN N+VMAL Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMAL 120
Query: 478 AGNKSDLASKRKVETEEAQTYAEENGLFYLETSAKSA 588 AGNK+DL KRKV EEA+ YAEENGLF++ETSAK+A Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTA 157
>tr|Q40209|Q40209_LOTJA RAB5A OS=Lotus japonicus GN=rab5A PE=2 SV=1 Length = 200
Score = 266 bits (680), Expect = 7e-70 Identities = 131/157 (83%), Positives = 145/157 (92%) Frame = +1
Query: 118 MATVGTNNMQAKLVLLGDMGAGKSSLVLRFVKGQFQEFQESTIGAAFFSQTVAVNETTVK 297 MAT+G NN+ AKLVLLGDMGAGKSSLVLRFVKGQF EFQESTIGAAFFSQT+AVN+ TVK Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 298 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNNDSFVRAKKWVQELQRQGNENLVMAL 477 FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DIT++DSF RAKKWVQELQ+QGN N+VMA Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFTRAKKWVQELQKQGNPNMVMAF 120
Query: 478 AGNKSDLASKRKVETEEAQTYAEENGLFYLETSAKSA 588 AGNKSDL KRKV +EA+ YAEENGLF++ETSAK+A Sbjct: 121 AGNKSDLEDKRKVTADEARVYAEENGLFFMETSAKTA 157
>tr|Q9SBU1|Q9SBU1_9ASTR GTP binding protein (Fragment) OS=Cichorium intybus x Cichorium endivia GN=gtp1 PE=2 SV=1 Length = 200
Score = 265 bits (677), Expect = 1e-69 Identities = 131/157 (83%), Positives = 144/157 (91%) Frame = +1
Query: 118 MATVGTNNMQAKLVLLGDMGAGKSSLVLRFVKGQFQEFQESTIGAAFFSQTVAVNETTVK 297 MAT+G NN+ AKLVLLGDMGAGKSSLVLRFVKGQF EFQESTIGAAFFSQT+ VN+ TVK Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLVVNDATVK 60
Query: 298 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNNDSFVRAKKWVQELQRQGNENLVMAL 477 FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DIT+ DSF RAKKWVQELQ+QGN N+VMAL Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMAL 120
Query: 478 AGNKSDLASKRKVETEEAQTYAEENGLFYLETSAKSA 588 AGNK+DL KRKV EEA+ YAEENGLF++ETSAK+A Sbjct: 121 AGNKADLEDKRKVTVEEARVYAEENGLFFMETSAKTA 157
>tr|Q9AWA0|Q9AWA0_9ASTR GTP binding protein OS=Cichorium intybus x Cichorium endivia GN=chi3152 PE=2 SV=1 Length = 200
Score = 265 bits (677), Expect = 1e-69 Identities = 131/157 (83%), Positives = 144/157 (91%) Frame = +1
Query: 118 MATVGTNNMQAKLVLLGDMGAGKSSLVLRFVKGQFQEFQESTIGAAFFSQTVAVNETTVK 297 MAT+G NN+ AK VLLGDMGAGKSSLVLRFVKGQF EFQESTIGAAFFSQT+AVN+ TVK Sbjct: 1 MATIGHNNLNAKFVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 298 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNNDSFVRAKKWVQELQRQGNENLVMAL 477 FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DIT+ DSF RAKKWVQELQ+QGN N+VMAL Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSADSFTRAKKWVQELQKQGNPNMVMAL 120
Query: 478 AGNKSDLASKRKVETEEAQTYAEENGLFYLETSAKSA 588 AGNK+DL KRKV EEA+ YAEENGLF++ETSAK+A Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFMETSAKTA 157
>tr|A5AX18|A5AX18_VITVI Putative uncharacterized protein (Chromosome undetermined scaffold_30, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00023506001 PE=3 SV=1 Length = 200
Score = 265 bits (676), Expect = 2e-69 Identities = 131/157 (83%), Positives = 144/157 (91%) Frame = +1
Query: 118 MATVGTNNMQAKLVLLGDMGAGKSSLVLRFVKGQFQEFQESTIGAAFFSQTVAVNETTVK 297 MAT+G NN+ AKLVLLGDMGAGKSSLVLRFVKGQF EFQESTIGAAFFSQT+AVN+ TVK Sbjct: 1 MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK 60
Query: 298 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNNDSFVRAKKWVQELQRQGNENLVMAL 477 FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DIT+ +SF RAKKWVQELQ+QGN N+VMAL Sbjct: 61 FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFARAKKWVQELQKQGNPNMVMAL 120
Query: 478 AGNKSDLASKRKVETEEAQTYAEENGLFYLETSAKSA 588 AGNK+DL KRKV EEA+ YAEENGLF+ ETSAK+A Sbjct: 121 AGNKADLEDKRKVTAEEARVYAEENGLFFTETSAKTA 157
>tr|A9NPA2|A9NPA2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 200
Score = 264 bits (675), Expect = 2e-69 Identities = 132/158 (83%), Positives = 145/158 (91%) Frame = +1
Query: 118 MATVGTNNMQAKLVLLGDMGAGKSSLVLRFVKGQFQEFQESTIGAAFFSQTVAVNETTVK 297 MATVG N+QAKLVLLGDMGAGKSSLVLRFVKGQF +QESTIGAAFFSQT+AVNET+VK Sbjct: 1 MATVGNKNVQAKLVLLGDMGAGKSSLVLRFVKGQFFAYQESTIGAAFFSQTLAVNETSVK 60
Query: 298 FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNNDSFVRAKKWVQELQRQGNENLVMAL 477 EIWDTAGQERYHSLAPMYYRGAAAAIIV+DITN DSFVRAKKWVQELQ+QGN N+VMAL Sbjct: 61 LEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNLDSFVRAKKWVQELQKQGNPNMVMAL 120
Query: 478 AGNKSDLASKRKVETEEAQTYAEENGLFYLETSAKSAQ 591 AGNKSD+ K KV EEA+ YA+ENGLF++ETSAK+AQ Sbjct: 121 AGNKSDMIEKSKVSPEEAKVYAQENGLFFMETSAKTAQ 158
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