DK953707 |
Clone id |
TST39A01NGRL0018_H22 |
Library |
TST39 |
Length |
525 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_H22. 5' end sequence. |
Accession |
DK953707 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL4Contig1 |
Sequence |
CAGGTTGAAGGAGCACTTCTTGGTACGCTCGCAGCAGATTTGCAGCCATGGGAAAGGAAA AGACTCACATCAACATTGTGGTCATTGGCCATGTCGACTCTGGAAAGTCCACTACCACTG GACATCTCATCTACAAGCTTGGTGGTATTGACAAGCGTGTCATAGAGCGGTTTGAGAAGG AAGCAGCTGAGATGAACAAGAGGTCATTCAAGTATGCGTGGGTGCTTGACAAACTGAAGG CTGAGCGTGAGCGTGGTATTACCATTGATATTGCCCTGTGGAAGTTTGAGACCACAAAGT ATTACTGCACTGTTATTGATGCGCCTGGTCATCGCGACTTCATCAAGAACATGATTACTG GAACTTCCCAGGCTGACTGTGCTGTCCTGATTATTGACTCCACAACTGGAGGTTTTGAAG CTGGTATTTCTAAGGATGGACAAACCCGTGAGCATGCCTTGTTGGCTTTTACCCTTGGGG TGAAGCAAATGATTTGTTGCTGCAACAAGATGGATGCCACAACAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q03033 |
Definition |
sp|Q03033|EF1A_WHEAT Elongation factor 1-alpha OS=Triticum aestivum |
Align length |
159 |
Score (bit) |
326.0 |
E-value |
5.0e-89 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6LAA4 |
Definition |
tr|Q6LAA4|Q6LAA4_HORVU Elongation factor 1-alpha OS=Hordeum vulgare |
Align length |
159 |
Score (bit) |
326.0 |
E-value |
5.0e-88 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953707|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_H22, 5' (525 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6LAA4|Q6LAA4_HORVU Elongation factor 1-alpha OS=Hordeum vulg... 326 5e-88 tr|Q3LUM5|Q3LUM5_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 326 5e-88 tr|Q10QZ6|Q10QZ6_ORYSJ Elongation factor 1-alpha OS=Oryza sativa... 326 5e-88 tr|Q10QZ5|Q10QZ5_ORYSJ Elongation factor 1-alpha, putative, expr... 326 5e-88 tr|O50018|O50018_MAIZE Elongation factor 1-alpha OS=Zea mays GN=... 326 5e-88 tr|B8APM5|B8APM5_ORYSI Putative uncharacterized protein OS=Oryza... 326 5e-88 tr|B6UHJ4|B6UHJ4_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 326 5e-88 tr|B2KNJ5|B2KNJ5_SACOF Elongation factor OS=Saccharum officinaru... 326 5e-88 tr|A3AEP8|A3AEP8_ORYSJ Elongation factor 1-alpha OS=Oryza sativa... 326 5e-88 tr|A9PG38|A9PG38_POPTR Elongation factor 1-alpha OS=Populus tric... 325 1e-87 tr|Q9M7E6|Q9M7E6_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 324 1e-87 tr|Q9M7E5|Q9M7E5_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 324 1e-87 tr|Q9M7E3|Q9M7E3_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 324 1e-87 tr|Q9M7E1|Q9M7E1_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 324 1e-87 tr|B8LPU5|B8LPU5_PICSI Putative uncharacterized protein OS=Picea... 324 1e-87 tr|B6TBL5|B6TBL5_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 324 1e-87 tr|B6T433|B6T433_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 324 1e-87 tr|B6SKA7|B6SKA7_MAIZE Elongation factor 1-alpha OS=Zea mays PE=... 324 1e-87 tr|B4FY16|B4FY16_MAIZE Putative uncharacterized protein OS=Zea m... 324 1e-87 tr|Q9ZWH9|Q9ZWH9_NICPA Elongation factor 1-alpha OS=Nicotiana pa... 324 2e-87 tr|Q5J1K3|Q5J1K3_ELAGV Elongation factor 1-alpha OS=Elaeis guine... 324 2e-87 tr|Q58I24|Q58I24_ACTDE Elongation factor 1-alpha OS=Actinidia de... 324 2e-87 tr|Q3LUM6|Q3LUM6_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 324 2e-87 tr|Q3LUM4|Q3LUM4_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 324 2e-87 tr|Q3LUM3|Q3LUM3_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 324 2e-87 tr|Q3LUM2|Q3LUM2_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 324 2e-87 tr|Q3LUM0|Q3LUM0_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 324 2e-87 tr|Q3LUL9|Q3LUL9_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 324 2e-87 tr|Q3LUL8|Q3LUL8_GOSHI Elongation factor 1-alpha OS=Gossypium hi... 324 2e-87 tr|B5LWQ9|B5LWQ9_ZIZJJ Translation elongation factor 1 (Fragment... 324 2e-87
>tr|Q6LAA4|Q6LAA4_HORVU Elongation factor 1-alpha OS=Hordeum vulgare GN=eF-1alpha PE=2 SV=1 Length = 447
Score = 326 bits (835), Expect = 5e-88 Identities = 159/159 (100%), Positives = 159/159 (100%) Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 227 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 407 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 408 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 524 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 159
>tr|Q3LUM5|Q3LUM5_GOSHI Elongation factor 1-alpha OS=Gossypium hirsutum GN=EF1A2 PE=2 SV=1 Length = 447
Score = 326 bits (835), Expect = 5e-88 Identities = 159/159 (100%), Positives = 159/159 (100%) Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 227 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 407 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 408 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 524 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 159
>tr|Q10QZ6|Q10QZ6_ORYSJ Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=Os03g0178000 PE=2 SV=1 Length = 447
Score = 326 bits (835), Expect = 5e-88 Identities = 159/159 (100%), Positives = 159/159 (100%) Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 227 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 407 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 408 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 524 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 159
>tr|Q10QZ5|Q10QZ5_ORYSJ Elongation factor 1-alpha, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g08050 PE=4 SV=1 Length = 347
Score = 326 bits (835), Expect = 5e-88 Identities = 159/159 (100%), Positives = 159/159 (100%) Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 227 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 407 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 408 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 524 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 159
>tr|O50018|O50018_MAIZE Elongation factor 1-alpha OS=Zea mays GN=EF1-A PE=2 SV=1 Length = 447
Score = 326 bits (835), Expect = 5e-88 Identities = 159/159 (100%), Positives = 159/159 (100%) Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 227 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 407 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 408 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 524 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 159
>tr|B8APM5|B8APM5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10237 PE=4 SV=1 Length = 447
Score = 326 bits (835), Expect = 5e-88 Identities = 159/159 (100%), Positives = 159/159 (100%) Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 227 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 407 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 408 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 524 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 159
>tr|B6UHJ4|B6UHJ4_MAIZE Elongation factor 1-alpha OS=Zea mays PE=2 SV=1 Length = 447
Score = 326 bits (835), Expect = 5e-88 Identities = 159/159 (100%), Positives = 159/159 (100%) Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 227 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 407 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 408 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 524 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 159
>tr|B2KNJ5|B2KNJ5_SACOF Elongation factor OS=Saccharum officinarum PE=2 SV=1 Length = 447
Score = 326 bits (835), Expect = 5e-88 Identities = 159/159 (100%), Positives = 159/159 (100%) Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 227 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 407 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 408 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 524 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 159
>tr|A3AEP8|A3AEP8_ORYSJ Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=OsJ_009270 PE=3 SV=1 Length = 435
Score = 326 bits (835), Expect = 5e-88 Identities = 159/159 (100%), Positives = 159/159 (100%) Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 227 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 407 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 408 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 524 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 159
>tr|A9PG38|A9PG38_POPTR Elongation factor 1-alpha OS=Populus trichocarpa PE=2 SV=1 Length = 449
Score = 325 bits (832), Expect = 1e-87 Identities = 158/159 (99%), Positives = 159/159 (100%) Frame = +3
Query: 48 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 227 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 228 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 407 DKLKAERERGITIDIALWKFETT+YYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT Sbjct: 61 DKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120
Query: 408 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 524 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATT 159
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