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DK953725
Clone id TST39A01NGRL0018_I17
Library
Length 570
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_I17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTAAATTTCTGCGGTCGTCTGGGCGAACTCCTTTGGCCGAAGCTCAGCTGTTCTGCTTCA
GATTAGAGTTGTAAGATGGCAGCTGCAGTTGCGGCTTCAGGAGGCAGCTTACAAGGGCCT
TTGACAGAGCCTCAGGGAGCTCCAGGAGTTGACACAGCAGGGGTCCCTTCAGGGCAAAAG
AGGGCTCGCGAGGATGAGGTAGTTGCTACAGGTGACAAGAAGTGGCCAGGATGGCCAGGG
GATAATGTGTTTAGATTGGTGGTTCCTGTTTCCAAAGTAGGAAGCATTATTGGAAGAAAA
GGAGAGTTTATCAAGAAAATGTGTGAAGAAACTCGGTCGCGAATCAAAATTTTGGAGGGG
ATACCTGGAACTCCTGATAGAGTTGTTATGGTGTCTGCAAGAGAGGAACCGGAGGGGTTG
CTTTCTCCTGCCATGGATGGCTTGCTCAAAGTCCATAAACGTGTTATAGATGGCTTGGGA
AAGTGAAATAGATGGTTCTGCCATGCGGACAGGATTAGTCTCAACAAAACTTTTGGTTCC
GGTGACTCAGGCTGGCAGCCTAATTGGGCG
■■Homology search results ■■ -
sp_hit_id P57722
Definition sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus
Align length 48
Score (bit) 46.2
E-value 4.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953725|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_I17, 5'
         (570 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus...    46   4e-06
sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens...    46   4e-06
sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens...    45   9e-06
sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus...    45   9e-06
sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=...    47   2e-05
sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus ...    42   2e-05
sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus...    42   2e-05
sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens...    42   2e-05
sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus G...    42   2e-05
sp|A0PQE7|PNP_MYCUA Polyribonucleotide nucleotidyltransferase OS...    44   6e-04
sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding ...    42   0.002
sp|Q0S208|PNP_RHOSR Polyribonucleotide nucleotidyltransferase OS...    42   0.002
sp|Q5YSV6|PNP_NOCFA Polyribonucleotide nucleotidyltransferase OS...    42   0.003
sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens...    42   0.003
sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding ...    40   0.006
sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus...    40   0.008
sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens...    40   0.008
sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus G...    40   0.008
sp|Q73VX0|PNP_MYCPA Polyribonucleotide nucleotidyltransferase OS...    40   0.011
sp|A0QIW5|PNP_MYCA1 Polyribonucleotide nucleotidyltransferase OS...    40   0.011
sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS...    40   0.011
sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K ...    40   0.011
sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K ...    40   0.011
sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K ...    40   0.011
sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K ...    40   0.011
sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K ...    40   0.011
sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K ...    40   0.011
sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K ...    40   0.011
sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cer...    39   0.014
sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fasci...    39   0.014

>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus
           GN=Pcbp3 PE=2 SV=2
          Length = 339

 Score = 46.2 bits (108), Expect(2) = 4e-06
 Identities = 24/48 (50%), Positives = 35/48 (72%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           RL++   +VGSIIG+KGE +KKM EE+ +RI I EG    P+R+V ++
Sbjct: 17  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT 62



 Score = 24.6 bits (52), Expect(2) = 4e-06
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 518 VSTKLLVPVTQAGSLIG 568
           V+ +L+VP +Q GSLIG
Sbjct: 98  VTLRLVVPASQCGSLIG 114



 Score = 39.3 bits (90), Expect = 0.014
 Identities = 19/49 (38%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKIL-EGIPGTPDRVVMVS 396
           RLVVP S+ GS+IG+ G  IK++ E T +++++  + +P + +R V +S
Sbjct: 101 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTIS 149



 Score = 32.7 bits (73), Expect = 1.3
 Identities = 15/54 (27%), Positives = 30/54 (55%)
 Frame = +1

Query: 235 PGDNVFRLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           P  +   L +P   +G IIGR+G  I ++ + + ++IKI     G+ +R + ++
Sbjct: 259 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 312


>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens
           GN=PCBP3 PE=1 SV=1
          Length = 339

 Score = 46.2 bits (108), Expect(2) = 4e-06
 Identities = 24/48 (50%), Positives = 35/48 (72%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           RL++   +VGSIIG+KGE +KKM EE+ +RI I EG    P+R+V ++
Sbjct: 17  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT 62



 Score = 24.6 bits (52), Expect(2) = 4e-06
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 518 VSTKLLVPVTQAGSLIG 568
           V+ +L+VP +Q GSLIG
Sbjct: 98  VTLRLVVPASQCGSLIG 114



 Score = 39.3 bits (90), Expect = 0.014
 Identities = 19/49 (38%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKIL-EGIPGTPDRVVMVS 396
           RLVVP S+ GS+IG+ G  IK++ E T +++++  + +P + +R V +S
Sbjct: 101 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTIS 149



 Score = 32.7 bits (73), Expect = 1.3
 Identities = 15/54 (27%), Positives = 30/54 (55%)
 Frame = +1

Query: 235 PGDNVFRLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           P  +   L +P   +G IIGR+G  I ++ + + ++IKI     G+ +R + ++
Sbjct: 259 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITIT 312


>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens
           GN=PCBP2 PE=1 SV=1
          Length = 365

 Score = 45.1 bits (105), Expect(2) = 9e-06
 Identities = 23/48 (47%), Positives = 35/48 (72%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           RL++   +VGSIIG+KGE +KKM EE+ +RI I EG    P+R++ ++
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA 62



 Score = 24.6 bits (52), Expect(2) = 9e-06
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 518 VSTKLLVPVTQAGSLIG 568
           V+ +L+VP +Q GSLIG
Sbjct: 98  VTLRLVVPASQCGSLIG 114



 Score = 36.2 bits (82), Expect = 0.12
 Identities = 17/49 (34%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKIL-EGIPGTPDRVVMVS 396
           RLVVP S+ GS+IG+ G  IK++ E T +++++  + +P + +R + ++
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149



 Score = 34.3 bits (77), Expect = 0.45
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +1

Query: 256 LVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           L +P   +G IIGR+G  I ++ + + ++IKI   + G+ DR V ++
Sbjct: 292 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 338


>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus
           GN=Pcbp2 PE=1 SV=1
          Length = 362

 Score = 45.1 bits (105), Expect(2) = 9e-06
 Identities = 23/48 (47%), Positives = 35/48 (72%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           RL++   +VGSIIG+KGE +KKM EE+ +RI I EG    P+R++ ++
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLA 62



 Score = 24.6 bits (52), Expect(2) = 9e-06
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 518 VSTKLLVPVTQAGSLIG 568
           V+ +L+VP +Q GSLIG
Sbjct: 98  VTLRLVVPASQCGSLIG 114



 Score = 36.2 bits (82), Expect = 0.12
 Identities = 17/49 (34%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKIL-EGIPGTPDRVVMVS 396
           RLVVP S+ GS+IG+ G  IK++ E T +++++  + +P + +R + ++
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149



 Score = 34.3 bits (77), Expect = 0.45
 Identities = 16/47 (34%), Positives = 29/47 (61%)
 Frame = +1

Query: 256 LVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           L +P   +G IIGR+G  I ++ + + ++IKI   + G+ DR V ++
Sbjct: 289 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 335


>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375
           OS=Arabidopsis thaliana GN=At4g18375 PE=2 SV=1
          Length = 606

 Score = 47.0 bits (110), Expect(2) = 2e-05
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
 Frame = +1

Query: 247 VFRLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMV--SAREEPEGL 420
           V+R++ P+  VG +IG+ G+ I  +   T+++IK+ + + G   RV+ +  S +E+ E +
Sbjct: 37  VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEI 96

Query: 421 ---------LSPAMDGLLKVHKRVI 468
                    L  A D LLKV+  ++
Sbjct: 97  GFTKSENEPLCCAQDALLKVYDAIV 121



 Score = 21.9 bits (45), Expect(2) = 2e-05
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 527 KLLVPVTQAGSLIG 568
           +LLVP +Q+ SLIG
Sbjct: 142 RLLVPFSQSSSLIG 155



 Score = 38.9 bits (89), Expect = 0.018
 Identities = 21/77 (27%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
 Frame = +1

Query: 247 VFRLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIP--GTPDRVVMVSAREEPEGL 420
           VF+++ P+  +  +IG+ G  IK++ E + S I++ +     G  + V++V+A E P+ +
Sbjct: 313 VFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDM 372

Query: 421 LSPAMDGLLKVHKRVID 471
            S A++ +L + + + D
Sbjct: 373 KSMAVEAVLLLQEYIND 389



 Score = 37.7 bits (86), Expect = 0.041
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTP--------DRVVMVSAREE 408
           RL+VP S+  S+IG+ GE IK++   TR+ +K++      P        D VV++S   E
Sbjct: 142 RLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISG--E 199

Query: 409 PEGL 420
           PE +
Sbjct: 200 PESV 203


>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus
           cuniculus GN=PCBP1 PE=2 SV=1
          Length = 356

 Score = 42.4 bits (98), Expect(2) = 2e-05
 Identities = 21/48 (43%), Positives = 35/48 (72%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           RL++   +VGSIIG+KGE +K++ EE+ +RI I EG    P+R++ ++
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT 62



 Score = 26.2 bits (56), Expect(2) = 2e-05
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 518 VSTKLLVPVTQAGSLIG 568
           V+ +L+VP TQ GSLIG
Sbjct: 98  VTLRLVVPATQCGSLIG 114



 Score = 35.0 bits (79), Expect = 0.26
 Identities = 16/49 (32%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKIL-EGIPGTPDRVVMVS 396
           RLVVP ++ GS+IG+ G  IK++ E T +++++  + +P + +R + ++
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149



 Score = 32.0 bits (71), Expect = 2.2
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = +1

Query: 256 LVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           L +P + +G IIGR+G  I ++ + + ++IKI   + G+  R V ++
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330


>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus
           GN=Pcbp1 PE=1 SV=1
          Length = 356

 Score = 42.4 bits (98), Expect(2) = 2e-05
 Identities = 21/48 (43%), Positives = 35/48 (72%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           RL++   +VGSIIG+KGE +K++ EE+ +RI I EG    P+R++ ++
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT 62



 Score = 26.2 bits (56), Expect(2) = 2e-05
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 518 VSTKLLVPVTQAGSLIG 568
           V+ +L+VP TQ GSLIG
Sbjct: 98  VTLRLVVPATQCGSLIG 114



 Score = 35.0 bits (79), Expect = 0.26
 Identities = 16/49 (32%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKIL-EGIPGTPDRVVMVS 396
           RLVVP ++ GS+IG+ G  IK++ E T +++++  + +P + +R + ++
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149



 Score = 32.0 bits (71), Expect = 2.2
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = +1

Query: 256 LVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           L +P + +G IIGR+G  I ++ + + ++IKI   + G+  R V ++
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330


>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens
           GN=PCBP1 PE=1 SV=2
          Length = 356

 Score = 42.4 bits (98), Expect(2) = 2e-05
 Identities = 21/48 (43%), Positives = 35/48 (72%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           RL++   +VGSIIG+KGE +K++ EE+ +RI I EG    P+R++ ++
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT 62



 Score = 26.2 bits (56), Expect(2) = 2e-05
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 518 VSTKLLVPVTQAGSLIG 568
           V+ +L+VP TQ GSLIG
Sbjct: 98  VTLRLVVPATQCGSLIG 114



 Score = 35.0 bits (79), Expect = 0.26
 Identities = 16/49 (32%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKIL-EGIPGTPDRVVMVS 396
           RLVVP ++ GS+IG+ G  IK++ E T +++++  + +P + +R + ++
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149



 Score = 32.0 bits (71), Expect = 2.2
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = +1

Query: 256 LVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           L +P + +G IIGR+G  I ++ + + ++IKI   + G+  R V ++
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330


>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus
           GN=PCBP1 PE=2 SV=1
          Length = 356

 Score = 42.4 bits (98), Expect(2) = 2e-05
 Identities = 21/48 (43%), Positives = 35/48 (72%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           RL++   +VGSIIG+KGE +K++ EE+ +RI I EG    P+R++ ++
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLT 62



 Score = 26.2 bits (56), Expect(2) = 2e-05
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +2

Query: 518 VSTKLLVPVTQAGSLIG 568
           V+ +L+VP TQ GSLIG
Sbjct: 98  VTLRLVVPATQCGSLIG 114



 Score = 35.0 bits (79), Expect = 0.26
 Identities = 16/49 (32%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKIL-EGIPGTPDRVVMVS 396
           RLVVP ++ GS+IG+ G  IK++ E T +++++  + +P + +R + ++
Sbjct: 101 RLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIA 149



 Score = 32.0 bits (71), Expect = 2.2
 Identities = 15/47 (31%), Positives = 29/47 (61%)
 Frame = +1

Query: 256 LVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           L +P + +G IIGR+G  I ++ + + ++IKI   + G+  R V ++
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTIT 330


>sp|A0PQE7|PNP_MYCUA Polyribonucleotide nucleotidyltransferase
           OS=Mycobacterium ulcerans (strain Agy99) GN=pnp PE=3
           SV=2
          Length = 762

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
 Frame = +1

Query: 124 TEPQGAPGVDTAGVPSGQKRARED------EVVATGDKKWPGWPGDNVFRLVVPVSKVGS 285
           T+  G P    AG  +  K AR        E + T D+  P  P   V  + VPV K+G 
Sbjct: 554 TKLDGIPSQVLAGALAQAKDARLTILEVMAEAIDTPDEMSPYAP--RVTTIKVPVDKIGE 611

Query: 286 IIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVSAREEP 411
           +IG KG+ I  + EETR++I I +      D  V V A + P
Sbjct: 612 VIGPKGKVINSITEETRAQISIED------DGTVFVGATDGP 647
tr_hit_id A9NUV7
Definition tr|A9NUV7|A9NUV7_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 101
Score (bit) 161.0
E-value 7.0e-41
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953725|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_I17, 5'
         (570 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NUV7|A9NUV7_PICSI Putative uncharacterized protein OS=Picea...   161   7e-41
tr|B8LM14|B8LM14_PICSI Putative uncharacterized protein OS=Picea...   166   8e-40
tr|A9T1H6|A9T1H6_PHYPA Predicted protein (Fragment) OS=Physcomit...   156   1e-38
tr|A7QMQ0|A7QMQ0_VITVI Chromosome undetermined scaffold_127, who...   154   2e-38
tr|A9S676|A9S676_PHYPA Predicted protein (Fragment) OS=Physcomit...   152   2e-37
tr|Q2QMN6|Q2QMN6_ORYSJ FLK, putative, expressed OS=Oryza sativa ...   147   3e-36
tr|Q9SR13|Q9SR13_ARATH Putative RNA-binding protein (AT3g04610/F...   140   5e-35
tr|Q58T16|Q58T16_ARATH FLK OS=Arabidopsis thaliana GN=FLK PE=4 SV=1   140   5e-35
tr|Q8W5C2|Q8W5C2_ORYSA Putative RNA binding protein OS=Oryza sat...   143   1e-34
tr|Q10GH8|Q10GH8_ORYSJ Os03g0627500 protein OS=Oryza sativa subs...   143   1e-34
tr|B8AN46|B8AN46_ORYSI Putative uncharacterized protein OS=Oryza...   143   1e-34
tr|A3AKL1|A3AKL1_ORYSJ Putative uncharacterized protein OS=Oryza...   143   1e-34
tr|Q10GH7|Q10GH7_ORYSJ KH domain containing protein, expressed O...   143   1e-34
tr|A3CJ44|A3CJ44_ORYSJ Putative uncharacterized protein OS=Oryza...   147   3e-34
tr|B6T5L0|B6T5L0_MAIZE KH domain containing protein OS=Zea mays ...   141   4e-34
tr|B6U2B4|B6U2B4_MAIZE Nucleic acid binding protein OS=Zea mays ...   139   2e-33
tr|A5C3D0|A5C3D0_VITVI Putative uncharacterized protein OS=Vitis...   131   3e-31
tr|A7PUN7|A7PUN7_VITVI Chromosome chr7 scaffold_31, whole genome...   131   3e-31
tr|A7QUD9|A7QUD9_VITVI Chromosome chr11 scaffold_177, whole geno...   135   2e-30
tr|Q9SZH4|Q9SZH4_ARATH Putative nucleic acid binding protein OS=...   132   2e-29
tr|A5ASG9|A5ASG9_VITVI Putative uncharacterized protein OS=Vitis...   119   4e-28
tr|B6T6U2|B6T6U2_MAIZE Nucleic acid binding protein OS=Zea mays ...   122   4e-27
tr|A5AF63|A5AF63_VITVI Putative uncharacterized protein OS=Vitis...   123   6e-27
tr|Q9AY47|Q9AY47_ORYSA Putative nucleic acid binding protein OS=...   122   7e-27
tr|Q7XC34|Q7XC34_ORYSJ Os10g0564000 protein OS=Oryza sativa subs...   122   7e-27
tr|A2ZAB0|A2ZAB0_ORYSI Putative uncharacterized protein OS=Oryza...   122   7e-27
tr|B8A3G9|B8A3G9_MAIZE Putative uncharacterized protein OS=Zea m...   119   1e-25
tr|B6TJ76|B6TJ76_MAIZE Nucleic acid binding protein OS=Zea mays ...   117   6e-25
tr|B8BMU2|B8BMU2_ORYSI Putative uncharacterized protein OS=Oryza...   104   3e-21
tr|B4FCA6|B4FCA6_MAIZE Putative uncharacterized protein OS=Zea m...   103   9e-21

>tr|A9NUV7|A9NUV7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 481

 Score =  161 bits (408), Expect(2) = 7e-41
 Identities = 76/101 (75%), Positives = 88/101 (87%), Gaps = 1/101 (0%)
 Frame = +1

Query: 175 QKRAREDEVVA-TGDKKWPGWPGDNVFRLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKI 351
           QKR R+DE+ A   DKKWPGWPGDNVFRL+VP   VG IIGRKGEF+KKMCEETRSRIKI
Sbjct: 61  QKRGRDDEIGAGLTDKKWPGWPGDNVFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKI 120

Query: 352 LEGIPGTPDRVVMVSAREEPEGLLSPAMDGLLKVHKRVIDG 474
           LEG+ GTP+R VMVSA+EEPE  +SPAMDG+L+VHKR+I+G
Sbjct: 121 LEGLRGTPERTVMVSAKEEPEAPVSPAMDGILRVHKRIIEG 161



 Score = 30.0 bits (66), Expect(2) = 7e-41
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +2

Query: 509 TGLVSTKLLVPVTQAGSLIG 568
           +G +ST+LLV  TQAGSLIG
Sbjct: 177 SGTISTRLLVAGTQAGSLIG 196


>tr|B8LM14|B8LM14_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 490

 Score =  166 bits (420), Expect = 8e-40
 Identities = 80/120 (66%), Positives = 99/120 (82%), Gaps = 6/120 (5%)
 Frame = +1

Query: 151 DTAGVPS----GQKRAREDEV-VATG-DKKWPGWPGDNVFRLVVPVSKVGSIIGRKGEFI 312
           D  G+P     GQKR RE+E+   TG +KKWPGWPG+NVFR++VP  KVG IIGRKGEF+
Sbjct: 13  DLIGIPRNANPGQKRGREEEIGTGTGAEKKWPGWPGENVFRMLVPSQKVGGIIGRKGEFV 72

Query: 313 KKMCEETRSRIKILEGIPGTPDRVVMVSAREEPEGLLSPAMDGLLKVHKRVIDGLGK*NR 492
           KKMCEETRSRIKIL+G+ GTP+RVVMVSA+EEP+  +SPAMDG+LKVHKR+I+G+ +  R
Sbjct: 73  KKMCEETRSRIKILDGLSGTPERVVMVSAKEEPDATISPAMDGILKVHKRIIEGIDEVGR 132


>tr|A9T1H6|A9T1H6_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_42908 PE=4 SV=1
          Length = 375

 Score =  156 bits (394), Expect(2) = 1e-38
 Identities = 70/88 (79%), Positives = 82/88 (93%)
 Frame = +1

Query: 211 GDKKWPGWPGDNVFRLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVM 390
           G+KKW GWPGDNVFRLVVPV KVG IIGRKGEF+K+MCEETRSRIKILEG+PGT +R+VM
Sbjct: 2   GEKKWAGWPGDNVFRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVM 61

Query: 391 VSAREEPEGLLSPAMDGLLKVHKRVIDG 474
           VSARE+PE  +SPAM+GLL+VH+RVI+G
Sbjct: 62  VSAREDPEAAISPAMEGLLRVHRRVIEG 89



 Score = 27.7 bits (60), Expect(2) = 1e-38
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +2

Query: 518 VSTKLLVPVTQAGSLIG 568
           VS++LLV  TQAGSLIG
Sbjct: 106 VSSRLLVAATQAGSLIG 122


>tr|A7QMQ0|A7QMQ0_VITVI Chromosome undetermined scaffold_127, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00002157001 PE=4 SV=1
          Length = 400

 Score =  154 bits (388), Expect(2) = 2e-38
 Identities = 71/102 (69%), Positives = 88/102 (86%), Gaps = 1/102 (0%)
 Frame = +1

Query: 175 QKRAREDE-VVATGDKKWPGWPGDNVFRLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKI 351
           QKR R+D+  +  G+K+WPGWPG++VFR++VP  KVGSIIGRKGEFIKK+ EETR+RIKI
Sbjct: 24  QKRGRDDDSAIGGGEKRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 83

Query: 352 LEGIPGTPDRVVMVSAREEPEGLLSPAMDGLLKVHKRVIDGL 477
           L+G PGT +R VMVSA+EEP+  L PAMDGLLKVHKR++DGL
Sbjct: 84  LDGPPGTAERAVMVSAKEEPDSSLPPAMDGLLKVHKRIVDGL 125



 Score = 29.3 bits (64), Expect(2) = 2e-38
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +2

Query: 512 GLVSTKLLVPVTQAGSLIG 568
           G VST+LLV  +QAGSLIG
Sbjct: 136 GKVSTRLLVAASQAGSLIG 154


>tr|A9S676|A9S676_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_43419 PE=4 SV=1
          Length = 355

 Score =  152 bits (385), Expect(2) = 2e-37
 Identities = 68/86 (79%), Positives = 80/86 (93%)
 Frame = +1

Query: 217 KKWPGWPGDNVFRLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVS 396
           KKW GWPGDNVFRL+VPV KVG IIGRKGEF+K+MCEETRSRIKILEG+PGT +R+VMVS
Sbjct: 1   KKWAGWPGDNVFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVS 60

Query: 397 AREEPEGLLSPAMDGLLKVHKRVIDG 474
           ARE+PE  +SPAM+GLL+VH+RVI+G
Sbjct: 61  AREDPEAAISPAMEGLLRVHRRVIEG 86



 Score = 27.7 bits (60), Expect(2) = 2e-37
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +2

Query: 518 VSTKLLVPVTQAGSLIG 568
           VS++LLV  TQAGSLIG
Sbjct: 103 VSSRLLVAATQAGSLIG 119


>tr|Q2QMN6|Q2QMN6_ORYSJ FLK, putative, expressed OS=Oryza sativa
           subsp. japonica GN=LOC_Os12g40560 PE=4 SV=2
          Length = 517

 Score =  147 bits (372), Expect(2) = 3e-36
 Identities = 63/102 (61%), Positives = 84/102 (82%)
 Frame = +1

Query: 172 GQKRAREDEVVATGDKKWPGWPGDNVFRLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKI 351
           G+ +  +     T +KKWPGWPG++VFR++VP  KVG++IGRKGEFIKKMCEE+R+RIK+
Sbjct: 91  GEAQGEQQANAVTDEKKWPGWPGESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKV 150

Query: 352 LEGIPGTPDRVVMVSAREEPEGLLSPAMDGLLKVHKRVIDGL 477
           L+G PG PDR VM+SA++EP+  L PA+DGLL+VHKR+ DGL
Sbjct: 151 LDGPPGVPDRAVMISAKDEPDAPLPPAVDGLLRVHKRITDGL 192



 Score = 28.5 bits (62), Expect(2) = 3e-36
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 479 ESEIDGSAMRTGLVS-TKLLVPVTQAGSLIG 568
           + E D      G V  T+LLVP +QAGSLIG
Sbjct: 193 DGESDQPQRAAGTVGPTRLLVPASQAGSLIG 223



 Score = 40.0 bits (92), Expect = 0.092
 Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIPG---TPDRVVMV 393
           RL+VP S+ GS+IG++G  IK + + ++  ++ILE +P    + DRVV +
Sbjct: 210 RLLVPASQAGSLIGKQGATIKSIQDASKCVLRILESVPPVALSDDRVVEI 259


>tr|Q9SR13|Q9SR13_ARATH Putative RNA-binding protein
           (AT3g04610/F7O18_9) OS=Arabidopsis thaliana GN=At3g04610
           PE=2 SV=1
          Length = 577

 Score =  140 bits (353), Expect(2) = 5e-35
 Identities = 69/128 (53%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
 Frame = +1

Query: 97  SGGSLQGPLTEPQGAPGVDTAGVPSGQKRAREDEVVATGD-KKWPGWPGDNVFRLVVPVS 273
           +G  +Q  + + +G P      + S QK   E++    G+ K+WPGWPG+ VFR++VP  
Sbjct: 141 NGDEVQDKVEDEEGIP----EHLESLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQ 196

Query: 274 KVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVSAREEPEGLLSPAMDGLLKV 453
           KVGSIIGRKG+ IKK+ EETR+RIKIL+G PGT +R VMVS +EEPE  L P+MDGLL+V
Sbjct: 197 KVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRV 256

Query: 454 HKRVIDGL 477
           H R++DGL
Sbjct: 257 HMRIVDGL 264



 Score = 31.6 bits (70), Expect(2) = 5e-35
 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
 Frame = +2

Query: 488 IDGSAMRT---GLVSTKLLVPVTQAGSLIG 568
           +DG A +      VST+LLVP +QAGSLIG
Sbjct: 264 LDGEASQAPPPSKVSTRLLVPASQAGSLIG 293


>tr|Q58T16|Q58T16_ARATH FLK OS=Arabidopsis thaliana GN=FLK PE=4 SV=1
          Length = 577

 Score =  140 bits (353), Expect(2) = 5e-35
 Identities = 69/128 (53%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
 Frame = +1

Query: 97  SGGSLQGPLTEPQGAPGVDTAGVPSGQKRAREDEVVATGD-KKWPGWPGDNVFRLVVPVS 273
           +G  +Q  + + +G P      + S QK   E++    G+ K+WPGWPG+ VFR++VP  
Sbjct: 141 NGDEVQDKVEDEEGIP----EHLESLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQ 196

Query: 274 KVGSIIGRKGEFIKKMCEETRSRIKILEGIPGTPDRVVMVSAREEPEGLLSPAMDGLLKV 453
           KVGSIIGRKG+ IKK+ EETR+RIKIL+G PGT +R VMVS +EEPE  L P+MDGLL+V
Sbjct: 197 KVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRV 256

Query: 454 HKRVIDGL 477
           H R++DGL
Sbjct: 257 HMRIVDGL 264



 Score = 31.6 bits (70), Expect(2) = 5e-35
 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
 Frame = +2

Query: 488 IDGSAMRT---GLVSTKLLVPVTQAGSLIG 568
           +DG A +      VST+LLVP +QAGSLIG
Sbjct: 264 LDGEASQAPPPSKVSTRLLVPASQAGSLIG 293


>tr|Q8W5C2|Q8W5C2_ORYSA Putative RNA binding protein OS=Oryza sativa
           GN=OSJNBb0013K08.4 PE=4 SV=1
          Length = 510

 Score =  143 bits (360), Expect(2) = 1e-34
 Identities = 60/96 (62%), Positives = 82/96 (85%)
 Frame = +1

Query: 187 REDEVVATGDKKWPGWPGDNVFRLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIP 366
           ++D +    DKKWPGWPG++VFR+++P  KVG+IIGRKGEFIKKMCEE+++RIKIL+G P
Sbjct: 89  QQDSLPVEADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPP 148

Query: 367 GTPDRVVMVSAREEPEGLLSPAMDGLLKVHKRVIDG 474
           G P+R VM+SA++EP+  +SPAMDGL +V+KR+ DG
Sbjct: 149 GVPERTVMISAKDEPDAPISPAMDGLFRVYKRITDG 184



 Score = 27.7 bits (60), Expect(2) = 1e-34
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 524 TKLLVPVTQAGSLIG 568
           T+LLVP +QAGSLIG
Sbjct: 202 TRLLVPASQAGSLIG 216



 Score = 40.8 bits (94), Expect = 0.054
 Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIP---GTPDRVVMVSAREEPEGL 420
           RL+VP S+ GS+IG++G  IK + + ++S ++I+E +P      DRVV +    EP G+
Sbjct: 203 RLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIVETLPLVALNDDRVVEIQG--EPVGV 259


>tr|Q10GH8|Q10GH8_ORYSJ Os03g0627500 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0627500 PE=2 SV=1
          Length = 510

 Score =  143 bits (360), Expect(2) = 1e-34
 Identities = 60/96 (62%), Positives = 82/96 (85%)
 Frame = +1

Query: 187 REDEVVATGDKKWPGWPGDNVFRLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIP 366
           ++D +    DKKWPGWPG++VFR+++P  KVG+IIGRKGEFIKKMCEE+++RIKIL+G P
Sbjct: 89  QQDSLPVEADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPP 148

Query: 367 GTPDRVVMVSAREEPEGLLSPAMDGLLKVHKRVIDG 474
           G P+R VM+SA++EP+  +SPAMDGL +V+KR+ DG
Sbjct: 149 GVPERTVMISAKDEPDAPISPAMDGLFRVYKRITDG 184



 Score = 27.7 bits (60), Expect(2) = 1e-34
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +2

Query: 524 TKLLVPVTQAGSLIG 568
           T+LLVP +QAGSLIG
Sbjct: 202 TRLLVPASQAGSLIG 216



 Score = 40.8 bits (94), Expect = 0.054
 Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
 Frame = +1

Query: 253 RLVVPVSKVGSIIGRKGEFIKKMCEETRSRIKILEGIP---GTPDRVVMVSAREEPEGL 420
           RL+VP S+ GS+IG++G  IK + + ++S ++I+E +P      DRVV +    EP G+
Sbjct: 203 RLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIVETLPLVALNDDRVVEIQG--EPVGV 259