DK953777
Clone id TST39A01NGRL0018_K21
Library
Length 580
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_K21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTTCAATCAGGCTAGGTCGAGGAAGCTGCCAGTCTGCACAGAGCAAGCCCTAACGTACCG
CTGCATATACGAGCCTACGATTGCTACTAATGCTAATTGCAACCATTGGCATCAGTCGAC
AGCAGCAAGCGCTCTTTGCACACCGCCCGCCATATGTCTCCACAATGTCTTCCACTCATG
TTCCAACGTAGATCACTCTACTCGGAAAAGTAACTATTTTGTGGATCCATCTAGTGTTCT
CACACTTGGGAAAGCAGGCAAGACATATTCAAGCTCCAGCAATGTCAAAGAATCAAGAAG
TGAAAGTGAAGGGGAAACCAACCCAAAGGATGCGAGTACACAGCCTGATAATCATGAAGA
GATGGTCGGTTCCGGAGCGGACGTAGAGGTGCCACCATTGGTAAGGGAATTGCGACAAGC
CCAACAAGATATGATGGTGAATATGAAGAGATGTTCATATGTGCTGTTTGCAGTGGGTGC
AGTCCACCTAGTGTGGGGGGGTGGGATGTTTTTGGCTTTGAAACCGCCCCTCGACCATGC
TGTCATGATAGAGGTGTGCATGTCATCAGTAGTCTTTTGT
■■Homology search results ■■ -
sp_hit_id Q6CHK0
Definition sp|Q6CHK0|VTS1_YARLI Protein VTS1 OS=Yarrowia lipolytica
Align length 72
Score (bit) 35.8
E-value 0.16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953777|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_K21, 5'
(580 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6CHK0|VTS1_YARLI Protein VTS1 OS=Yarrowia lipolytica GN=VTS1... 36 0.16
sp|P23578|ACRO_MOUSE Acrosin OS=Mus musculus GN=Acr PE=2 SV=1 33 1.0
sp|P04065|AMYH_YEAST Glucoamylase S1 OS=Saccharomyces cerevisiae... 32 1.8
sp|P29760|AMYI_YEAST Glucoamylase S2 OS=Saccharomyces cerevisiae... 31 5.1
sp|P08640|MUC1_YEAST Mucin-like protein 1 OS=Saccharomyces cerev... 30 6.7
sp|O93528|VAX1A_XENLA Ventral anterior homeobox 1a OS=Xenopus la... 30 6.7
sp|A1JPA1|MDTK_YERE8 Multidrug resistance protein mdtK OS=Yersin... 30 6.7
sp|Q8BTI9|PK3CB_MOUSE Phosphatidylinositol-4,5-bisphosphate 3-ki... 30 8.7

>sp|Q6CHK0|VTS1_YARLI Protein VTS1 OS=Yarrowia lipolytica GN=VTS1
PE=3 SV=1
Length = 437

Score = 35.8 bits (81), Expect = 0.16
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = -3

Query: 536 GRGAVSKPKTSHPPTLGGLHPLQTAHMNISSYSPSYLVGLVAIPLPMVAPLRPLRNRPSL 357
G+GA+ + T LGGLHP QT H N++ + + P+ AP+ + PS
Sbjct: 200 GQGAMGQAMTGGLGGLGGLHPHQTTHSNLNPNAHN----------PIYAPVGTFPSTPSH 249

Query: 356 HDYQAVYSHPLG 321
++ + P+G
Sbjct: 250 KHTSSLSTEPIG 261


>sp|P23578|ACRO_MOUSE Acrosin OS=Mus musculus GN=Acr PE=2 SV=1
Length = 436

Score = 33.1 bits (74), Expect = 1.0
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = -3

Query: 518 KPKTSHPPTLGGLHPLQTAHMNISSYSPSYLVGLVAIPLPMVAPLRPLRNRPS 360
+P T HPPT HP+ + H S P Y L + PL + PLRPL +RPS
Sbjct: 299 QPATPHPPTTR--HPMVSFHPP-SLRPPWYFQHLPSRPL-YLRPLRPLLHRPS 347


>sp|P04065|AMYH_YEAST Glucoamylase S1 OS=Saccharomyces cerevisiae
GN=STA1 PE=3 SV=2
Length = 767

Score = 32.3 bits (72), Expect = 1.8
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Frame = -2

Query: 573 TTDDMHTSIMTAWSRGG-----FKAKNIPPPHTRWTAPTANSTYEHLFIFTIISCWACRN 409
+T + T T+ +GG F KNIP + APT++ T F T I+ C
Sbjct: 155 STTVVTTEYSTSTKQGGEITTTFVTKNIPTTYLTTIAPTSSVTTVTNFTPTTITTTVCST 214

Query: 408 SLTNGGTSTSAPEP 367
+ G +TS P
Sbjct: 215 GTNSAGETTSGCSP 228


>sp|P29760|AMYI_YEAST Glucoamylase S2 OS=Saccharomyces cerevisiae
GN=STA2 PE=3 SV=1
Length = 768

Score = 30.8 bits (68), Expect = 5.1
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = -2

Query: 543 TAWSRGG-----FKAKNIPPPHTRWTAPTANSTYEHLFIFTIISCWACRNSLTNGGTSTS 379
T+ +GG F KNIP + APT++ T F T I+ C + G +TS
Sbjct: 166 TSTKQGGEITTTFVTKNIPTTYLTTIAPTSSVTTVTNFTPTTITTTVCSTGTNSAGETTS 225

Query: 378 APEP 367
P
Sbjct: 226 GCSP 229


>sp|P08640|MUC1_YEAST Mucin-like protein 1 OS=Saccharomyces cerevisiae
GN=MUC1 PE=1 SV=2
Length = 1367

Score = 30.4 bits (67), Expect = 6.7
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = -2

Query: 573 TTDDMHTSIMTAWSRGG-----FKAKNIPPPHTRWTAPTANSTYEHLFIFTIISCWACRN 409
+T + T T+ GG F KNIP + APT + T F T I+ C
Sbjct: 1038 STTVVTTEYSTSTKPGGEITTTFVTKNIPTTYLTTIAPTPSVTTVTNFTPTTITTTVCST 1097

Query: 408 SLTNGGTSTSAPEP 367
+ G +TS P
Sbjct: 1098 GTNSAGETTSGCSP 1111


>sp|O93528|VAX1A_XENLA Ventral anterior homeobox 1a OS=Xenopus
laevis GN=vax1-A PE=2 SV=1
Length = 295

Score = 30.4 bits (67), Expect = 6.7
Identities = 23/58 (39%), Positives = 27/58 (46%)
Frame = -3

Query: 509 TSHPPTLGGLHPLQTAHMNISSYSPSYLVGLVAIPLPMVAPLRPLRNRPSLHDYQAVY 336
TS PP GLHP T H NI + L+G VA L PL +LH+ A Y
Sbjct: 219 TSTPPHQPGLHPSPTGH-NIFNMPVPSLLGTVANRLSS----HPLTMAGNLHELSARY 271


>sp|A1JPA1|MDTK_YERE8 Multidrug resistance protein mdtK OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=mdtK PE=3 SV=1
Length = 457

Score = 30.4 bits (67), Expect = 6.7
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3

Query: 9 RLGRGSCQSAQSKP*RTAAYTSLRLLLMLIATIGI----SRQQQALFAHRPPYVSTMSS 173
RLG+GS A R AAYTS+ + LML I R+ AL ++ P V M+S
Sbjct: 302 RLGQGSVDDA-----RVAAYTSIAVGLMLACVTAIFTVVFREHIALLYNKTPEVVVMAS 355


>sp|Q8BTI9|PK3CB_MOUSE Phosphatidylinositol-4,5-bisphosphate
3-kinase catalytic subunit beta isoform OS=Mus musculus
GN=Pik3cb PE=2 SV=1
Length = 1064

Score = 30.0 bits (66), Expect = 8.7
Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 5/92 (5%)
Frame = +2

Query: 200 TRKSNYFVDPSSVLTLGKAGKTYXXXXXXXXXXXXXXGETNPKDA-----STQPDNHEEM 364
T+KS ++PS T+ KAGK + G+ D S+ PD EEM
Sbjct: 407 TKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSWSSFPDELEEM 466

Query: 365 VGSGADVEVPPLVRELRQAQQDMMVNMKRCSY 460
+ V+ P N K+ Y
Sbjct: 467 LNPMGTVQTNPYAENATALHITFPENKKQPCY 498


tr_hit_id A2WMZ2
Definition tr|A2WMZ2|A2WMZ2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica
Align length 91
Score (bit) 35.0
E-value 3.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK953777|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_K21, 5'
(580 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A2WMZ2|A2WMZ2_ORYSI Putative uncharacterized protein OS=Oryza... 35 3.0
tr|Q18FU0|Q18FU0_HALWD Halorhodopsin OS=Haloquadratum walsbyi (s... 34 6.8
tr|B6ACU1|B6ACU1_9CRYT Pyrroline-5-carboxylate reductase family ... 33 8.8

>tr|A2WMZ2|A2WMZ2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_01216 PE=4 SV=1
Length = 1118

Score = 35.0 bits (79), Expect = 3.0
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Frame = -3

Query: 563 TCTPLS*QHGRGAVSKPKT---SHPPTLGGLHPLQTAHMN--------ISSYSPSYLVGL 417
TCTP + GA + P + S P GG +P TAH +S PS +V
Sbjct: 203 TCTPPN-----GARASPVSVPLSAVPKAGGTYPPLTAHTAGWMANAAAATSSVPSAVVAA 257

Query: 416 VAIPLPMVAPLRPLRNRPSLHDYQAVYSHPL 324
++P+P + P+ RP++ DYQ+ S L
Sbjct: 258 SSLPVPPNQAV-PIMKRPTITDYQSAESEQL 287


>tr|Q18FU0|Q18FU0_HALWD Halorhodopsin OS=Haloquadratum walsbyi
(strain DSM 16790) GN=hop PE=4 SV=1
Length = 292

Score = 33.9 bits (76), Expect = 6.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1

Query: 403 YQWWHLYVRSGTDHLFMIIRLCTRILWVGFP 311
++W +GTD +F +RL T +LW+G+P
Sbjct: 197 FEWPVSAAAAGTDDIFSTLRLLTVVLWIGYP 227


>tr|B6ACU1|B6ACU1_9CRYT Pyrroline-5-carboxylate reductase family
protein OS=Cryptosporidium muris RN66 GN=CMU_016970 PE=4
SV=1
Length = 289

Score = 33.5 bits (75), Expect = 8.8
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -1

Query: 193 IYVGT*VEDIVETYGGRCAKSACCCRLMPMVAISI 89
+ G ++DI+ET+GG K+ C R+MP +AIS+
Sbjct: 106 VCAGITIDDIIETFGGN--KNLYCVRVMPNMAISV 138