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NBDC - LSDB Archive
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DK953790
Clone id TST39A01NGRL0018_L10
Library
Length 587
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_L10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAGGTCGAGAGTGTGAAATCAGAGAGAGAGTTATGGCGACCTCCACCGTTGCTTCCTCTG
CGCAGCTCGTTCCCTCTCTCTCCCTACCGCTCACCAGGTCGAAGTTCTTGGGGTCTCCTG
CCTTCACACCCGGCGCATTTACCTCCAATGGGTCACGCCTCTCCATGTCGGCAGAGTGGC
TGCCTGGGCAGCCCCGCCCCGCTCATCTAGACGGATCTTCCCCCGGGGACTTTGGCTTTG
ATCCTCTAGGCCTTGCAGAGGTGCCTGAGAATTTTGAGCGATACAAGGAGTCTGAGCTCA
TTCACTGCAGATGGGCAATGCTTGCTGTGCCTGGTGTGCTACTCCCAGAGGCACTTGGTC
TGGGCAACTGGGTGGATGCTCAGAAATGGGCCGCCACTCCGGGTGGCCAGGCTACGTATT
TGGGTAACCCTGTCCCATGGGGCAATCTGCCAGTAATTCTTGCAGTGGAGGCTTTTGCTA
TTGCCTTCGCTGAGGCACAGAGAAATTATGAGAAGGACCCAGAGAAGCGGAAATACCCTG
GTGGGCCCTTCGATCCGCTCCGGTTTTCTTCTAAAATCCCAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9SDM1
Definition sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare
Align length 177
Score (bit) 240.0
E-value 4.0e-63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953790|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_L10, 5'
         (587 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...   240   4e-63
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...   225   1e-58
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...    91   3e-18
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...    86   1e-16
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...    86   2e-16
sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chl...    84   4e-16
sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...    84   5e-16
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...    81   3e-15
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    81   4e-15
sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins (F...    77   6e-14
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...    76   1e-13
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...    74   4e-13
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...    74   4e-13
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    74   5e-13
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    74   5e-13
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...    74   7e-13
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...    73   9e-13
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...    73   9e-13
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    73   1e-12
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    73   1e-12
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...    73   1e-12
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...    73   1e-12
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    72   2e-12
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...    72   2e-12
sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl...    72   2e-12
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...    72   3e-12
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...    71   5e-12
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...    71   5e-12
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...    71   5e-12
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...    71   5e-12

>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21,
           chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1
          Length = 245

 Score =  240 bits (612), Expect = 4e-63
 Identities = 120/177 (67%), Positives = 130/177 (73%)
 Frame = +3

Query: 57  SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHLDGSSPGDFG 236
           SA  VPSL  P +RS   G P     A+ +   R++MSAEW PGQPRPAHLDGSSPGDFG
Sbjct: 11  SAVGVPSLLAPSSRSGRSGLPFC---AYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFG 67

Query: 237 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGGQAT 416
           FDPLGLA VPENFER+KESE+ HCRWAML VPGVL+PEALGLGNWV AQ+WAA P GQAT
Sbjct: 68  FDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQAT 127

Query: 417 YLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLRFSSKIPKK 587
           YLGNPVPWGNLP               QR  EKDPEK+KYPGG FDPL F SK P K
Sbjct: 128 YLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPLGF-SKDPAK 183



 Score = 32.3 bits (72), Expect = 1.8
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 237 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEA 353
           FDPLG ++ P  FE  K  E+ + R AMLA  G  + ++
Sbjct: 172 FDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQS 210


>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A,
           chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1
          Length = 246

 Score =  225 bits (574), Expect = 1e-58
 Identities = 116/187 (62%), Positives = 135/187 (72%), Gaps = 2/187 (1%)
 Frame = +3

Query: 33  MATSTVASSA--QLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAH 206
           MA++T+ S     + PS  L  T+SKF  +     GA T+  SR SMSA+W+PGQPRP++
Sbjct: 1   MASNTLMSCGIPAVCPSF-LSSTKSKFAAAMPVYVGA-TNFMSRFSMSADWMPGQPRPSY 58

Query: 207 LDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQK 386
           LDGS+PGDFGFD LGL EVP N ERYKESELIHCRWAMLAVPG+++PEALGLGNWV AQ+
Sbjct: 59  LDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQE 118

Query: 387 WAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLRF 566
           WAA PGGQATYLG PVPWG LP               QR+ EKD EK+KYPGG FDPL +
Sbjct: 119 WAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGY 178

Query: 567 SSKIPKK 587
            SK P K
Sbjct: 179 -SKDPAK 184



 Score = 35.0 bits (79), Expect = 0.28
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +3

Query: 237 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLG 365
           FDPLG ++ P  FE  K  E+ + R A+LA+ G  + ++  LG
Sbjct: 173 FDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLG 215


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score = 91.3 bits (225), Expect = 3e-18
 Identities = 68/206 (33%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
 Frame = +3

Query: 33  MATSTVASSAQLVPSLSLPLTRSKFLGSP--------AFTPGAFTSNGSRL--SMSAEWL 182
           MAT T  +SA +     L   +S+FLG          AF P   + + S    +   EWL
Sbjct: 1   MATVTTQASAAIFGPCGL---KSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWL 57

Query: 183 PGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGL 362
           PG   P +L GS PGD GFDPLGLAE PEN   + ++EL++ RWAML V G+LLPE    
Sbjct: 58  PGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTS 117

Query: 363 GNWVDAQKWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQR--NYEKDPEKRK- 533
              ++  KW A   G+  Y  +      +                +   +  +DP  ++ 
Sbjct: 118 IGIINVPKWYA--AGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQY 175

Query: 534 --------YPGGPFDPLRFSSKIPKK 587
                   YPGG F+PL F+  +  K
Sbjct: 176 SLPAGEVGYPGGIFNPLNFAPTLEAK 201


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
 Frame = +3

Query: 177 WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEAL 356
           WLPG   PA+LDGS  GD GFDPL LAE PE+   + ++++++ RWAML V G+L+PE L
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVL 95

Query: 357 GLGNWVDAQKWAATPGGQATYLGNPVP--------------WGNLPXXXXXXXXXXXXXX 494
                ++A +W   PG +  +  +                 W ++               
Sbjct: 96  TKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGSVNQDPIF--- 152

Query: 495 XQRNYEKDPEKRKYPGGPFDPLRFS 569
             ++Y   P +  YPG  F+PL F+
Sbjct: 153 --KSYSLPPHECGYPGRVFNPLNFA 175


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score = 85.5 bits (210), Expect = 2e-16
 Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
 Frame = +3

Query: 36  ATSTVASSAQLVPSLS-----LPLTRSKFLGSPAFTPGAFTSNGSRLSMSAE-------- 176
           A+ST+A+ A   PS       +  T++ FLG        +++  +  S +          
Sbjct: 6   ASSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDR 65

Query: 177 --WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPE 350
             W PG   P  LDGS PGDFGFDPLGLA  PE+    +++EL+HCRWAML   G+ +PE
Sbjct: 66  PLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPE 125

Query: 351 ALGLGNWVDAQKW 389
            L     ++   W
Sbjct: 126 LLTKIGILNTPSW 138


>sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=2
           SV=1
          Length = 276

 Score = 84.3 bits (207), Expect = 4e-16
 Identities = 60/171 (35%), Positives = 70/171 (40%), Gaps = 43/171 (25%)
 Frame = +3

Query: 177 WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPE----------------------------- 269
           W PG   P  LDGS  GD GFDP GL +  E                             
Sbjct: 59  WFPGANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESS 118

Query: 270 --------------NFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGG 407
                           +R++E ELIH RWAML   G +  EAL    W DA K     G 
Sbjct: 119 EIKPTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEG- 177

Query: 408 QATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPL 560
            ++YLG P+P+ +L                QRN E DPEKR YPGG FDPL
Sbjct: 178 -SSYLGQPLPF-SLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGGYFDPL 226



 Score = 35.0 bits (79), Expect = 0.28
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +3

Query: 222 PGDFGFDPLGLAEVPENFERYKESELIHCRWAMLA 326
           PG + FDPLGLA  PE  +  K +E+ H R AM+A
Sbjct: 219 PGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVA 252


>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score = 84.0 bits (206), Expect = 5e-16
 Identities = 65/196 (33%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
 Frame = +3

Query: 33  MATSTVASSAQLV-PSLSLP--LTRS-----KFLGSPAFTPGAFTSNGSRLSMSAEWLPG 188
           MAT T  +SA +  P  S P  LT S     + L   +    A TS+    +   EWLPG
Sbjct: 1   MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPG 60

Query: 189 QPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEA----- 353
              P +L GS  GD GFDPLGLAE PEN + + ++EL++ RWAML V G+LLPE      
Sbjct: 61  LASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIG 120

Query: 354 -LGLGNWVDAQKWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQ---RNYEKDP 521
            + +  W DA K          ++   + +  +                    + Y    
Sbjct: 121 IINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPK 180

Query: 522 EKRKYPGGPFDPLRFS 569
            +  YPGG F+PL F+
Sbjct: 181 GEVGYPGGIFNPLNFA 196


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 51/133 (38%), Positives = 70/133 (52%), Gaps = 15/133 (11%)
 Frame = +3

Query: 36  ATSTVASSAQLVPSLS-----LPLTRSKFLGSPAFTPGAFTSN-GSR-LSMSAE------ 176
           A+ST+A+ A   PS       +  T++ FLG        F +  GSR +++SA       
Sbjct: 6   ASSTIAAVAFSSPSSQKNGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDR 65

Query: 177 --WLPGQPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPE 350
             W PG   P  LDGS PGDFGFDPLGL   PE+ +   ++EL+H RWAML   G+ +PE
Sbjct: 66  PLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPE 125

Query: 351 ALGLGNWVDAQKW 389
            L     ++   W
Sbjct: 126 FLTKIGVLNTPSW 138


>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26,
           chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1
          Length = 280

 Score = 80.9 bits (198), Expect = 4e-15
 Identities = 46/128 (35%), Positives = 60/128 (46%), Gaps = 7/128 (5%)
 Frame = +3

Query: 198 PAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGL--GNW 371
           P +L+G   GD+G+DP GL + PENF +Y+  ELIH RWAML   G ++PEAL     N 
Sbjct: 82  PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANC 141

Query: 372 VDAQKWAAT-----PGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKY 536
                W  T      G    Y G  +P   +                +     D E + +
Sbjct: 142 GPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLH 201

Query: 537 PGGPFDPL 560
           PGGPFDPL
Sbjct: 202 PGGPFDPL 209



 Score = 30.0 bits (66), Expect = 8.9
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 237 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLL 344
           FDPLGLA+ PE     K  E+ + R AM A+ G  +
Sbjct: 206 FDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFI 241


>sp|P08975|LH15_EUGGR Light-harvesting complex I LH35 proteins
           (Fragment) OS=Euglena gracilis PE=2 SV=1
          Length = 331

 Score = 77.0 bits (188), Expect = 6e-14
 Identities = 60/195 (30%), Positives = 83/195 (42%), Gaps = 4/195 (2%)
 Frame = +3

Query: 15  EIRERVMATSTVASSAQLVPSLSLPLTRS--KFLGSPAFTPGAFTSNGSRLSMSAEWLPG 188
           E++  V A   VA+   L+  L  PL  +    L  P      F + G +      W PG
Sbjct: 112 EVQNHVTAQGPVAN---LIEHLRHPLAANIGANLAHPWPPVAMFATTGHK---DGVWFPG 165

Query: 189 QPRPAHLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGN 368
              PAHL G  P D GFDPL +A  P  + R + SE+ H R +MLA+ G ++PE LG G 
Sbjct: 166 AQPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGKGA 225

Query: 369 WVDAQKWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQR--NYEKDPEKRKYPG 542
           W +              +GN V    L                    N++K    R YPG
Sbjct: 226 WFE--------------VGNSVDGIKLGFILMAIAAPTEYWRGNGGFNWDKGTADRSYPG 271

Query: 543 GPFDPLRFSSKIPKK 587
             FDPL+ ++   K+
Sbjct: 272 --FDPLKLTTDYTKR 284



 Score = 35.0 bits (79), Expect = 0.28
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = +3

Query: 264 PENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVD 377
           P  +ER + +E+ + R AMLA+ G + PE LG G W +
Sbjct: 1   PTVYERMRVAEVFNGRLAMLAIVGCVYPELLGNGVWFE 38
tr_hit_id Q9ZSU0
Definition tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza sativa
Align length 180
Score (bit) 239.0
E-value 1.0e-61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953790|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_L10, 5'
         (587 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza ...   239   1e-61
tr|Q5ZA98|Q5ZA98_ORYSJ Os06g0320500 protein OS=Oryza sativa subs...   239   1e-61
tr|A2YCB9|A2YCB9_ORYSI Putative uncharacterized protein OS=Oryza...   239   1e-61
tr|B6SSN3|B6SSN3_MAIZE Chlorophyll a-b binding protein 6A OS=Zea...   238   2e-61
tr|B4XGT7|B4XGT7_9POAL Chloroplast chlorophyll a/b binding prote...   236   9e-61
tr|A9T399|A9T399_PHYPA Predicted protein OS=Physcomitrella paten...   236   9e-61
tr|Q40512|Q40512_TOBAC Photosystem I light-harvesting chlorophyl...   235   1e-60
tr|B7FH03|B7FH03_MEDTR Putative uncharacterized protein OS=Medic...   235   2e-60
tr|B4FZL4|B4FZL4_MAIZE Chlorophyll a-b binding protein 6A OS=Zea...   235   2e-60
tr|Q9C5R7|Q9C5R7_ARATH AT3g54890 OS=Arabidopsis thaliana GN=AT3g...   233   5e-60
tr|A9NRY9|A9NRY9_PICSI Putative uncharacterized protein OS=Picea...   233   5e-60
tr|Q01667|Q01667_ARATH AT3g54890 (Chlorophyll A/B-binding protei...   233   8e-60
tr|A8MS75|A8MS75_ARATH Uncharacterized protein At3g54890.4 OS=Ar...   233   8e-60
tr|A9NS16|A9NS16_PICSI Putative uncharacterized protein OS=Picea...   232   1e-59
tr|A9PJ58|A9PJ58_POPJC Putative uncharacterized protein OS=Popul...   230   4e-59
tr|A9P266|A9P266_PICSI Putative uncharacterized protein OS=Picea...   230   5e-59
tr|A5AE63|A5AE63_VITVI Putative uncharacterized protein OS=Vitis...   229   9e-59
tr|A9T3X6|A9T3X6_PHYPA Predicted protein OS=Physcomitrella paten...   226   7e-58
tr|Q02069|Q02069_PINSY Type 1 chlorophyll a /b-binding protein O...   225   2e-57
tr|Q7DM40|Q7DM40_PINSY Type 1 chlorophyll a /b-binding protein (...   224   2e-57
tr|A9TJX6|A9TJX6_PHYPA Predicted protein OS=Physcomitrella paten...   220   4e-56
tr|Q14K86|Q14K86_PLAAC Chlorophyll a/b-binding protein, photosys...   201   3e-50
tr|Q6V8T3|Q6V8T3_MALDO Chlorophyll a/b-binding protein type I (F...   199   1e-49
tr|Q3EAJ6|Q3EAJ6_ARATH Uncharacterized protein At3g54890.3 OS=Ar...   196   8e-49
tr|Q3E725|Q3E725_ARATH Uncharacterized protein At3g54890.2 OS=Ar...   196   8e-49
tr|Q9M539|Q9M539_9LAMI Chlorophyll a/b-binding protein type I (F...   191   3e-47
tr|A2SY12|A2SY12_MESVI Light-harvesting chlorophyll-a/b binding ...   138   2e-31
tr|A9NQL6|A9NQL6_PICSI Putative uncharacterized protein OS=Picea...   120   7e-26
tr|Q9FVE3|Q9FVE3_CHLRE Chlorophyll A-B binding protein of LHCI O...   117   5e-25
tr|Q7DM26|Q7DM26_CHLRE Light harvesting complex protein I-20 OS=...   116   8e-25

>tr|Q9ZSU0|Q9ZSU0_ORYSA Chlorophyll a/b-binding protein OS=Oryza
           sativa GN=Cab26 PE=2 SV=1
          Length = 241

 Score =  239 bits (609), Expect = 1e-61
 Identities = 122/180 (67%), Positives = 135/180 (75%), Gaps = 1/180 (0%)
 Frame = +3

Query: 33  MATSTVAS-SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHL 209
           MATS + S SA  VPSL  P +    L   A+     T++G R++MSAEW+PGQPRPAHL
Sbjct: 1   MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA----TTSG-RVTMSAEWMPGQPRPAHL 55

Query: 210 DGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKW 389
           DGSSPGDFGFDPLGLA VPENFER+KESE+ HCRWAMLAVPGVL+PEALGLGNWV AQ+W
Sbjct: 56  DGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEW 115

Query: 390 AATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLRFS 569
           AA PGGQATYLGNPVPWG LP               QR  EKDPEK+KYPGG FDPL FS
Sbjct: 116 AAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFS 175



 Score = 35.0 bits (79), Expect = 3.1
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 237 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEA 353
           FDPLG ++ P  FE YK  E+ + R AMLA  G  + ++
Sbjct: 169 FDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQS 207


>tr|Q5ZA98|Q5ZA98_ORYSJ Os06g0320500 protein OS=Oryza sativa subsp.
           japonica GN=P0578B12.4 PE=2 SV=1
          Length = 241

 Score =  239 bits (609), Expect = 1e-61
 Identities = 122/180 (67%), Positives = 135/180 (75%), Gaps = 1/180 (0%)
 Frame = +3

Query: 33  MATSTVAS-SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHL 209
           MATS + S SA  VPSL  P +    L   A+     T++G R++MSAEW+PGQPRPAHL
Sbjct: 1   MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA----TTSG-RVTMSAEWMPGQPRPAHL 55

Query: 210 DGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKW 389
           DGSSPGDFGFDPLGLA VPENFER+KESE+ HCRWAMLAVPGVL+PEALGLGNWV AQ+W
Sbjct: 56  DGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEW 115

Query: 390 AATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLRFS 569
           AA PGGQATYLGNPVPWG LP               QR  EKDPEK+KYPGG FDPL FS
Sbjct: 116 AAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFS 175



 Score = 35.0 bits (79), Expect = 3.1
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 237 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEA 353
           FDPLG ++ P  FE YK  E+ + R AMLA  G  + ++
Sbjct: 169 FDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQS 207


>tr|A2YCB9|A2YCB9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_22755 PE=4 SV=1
          Length = 241

 Score =  239 bits (609), Expect = 1e-61
 Identities = 122/180 (67%), Positives = 135/180 (75%), Gaps = 1/180 (0%)
 Frame = +3

Query: 33  MATSTVAS-SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHL 209
           MATS + S SA  VPSL  P +    L   A+     T++G R++MSAEW+PGQPRPAHL
Sbjct: 1   MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYA----TTSG-RVTMSAEWMPGQPRPAHL 55

Query: 210 DGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKW 389
           DGSSPGDFGFDPLGLA VPENFER+KESE+ HCRWAMLAVPGVL+PEALGLGNWV AQ+W
Sbjct: 56  DGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEW 115

Query: 390 AATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLRFS 569
           AA PGGQATYLGNPVPWG LP               QR  EKDPEK+KYPGG FDPL FS
Sbjct: 116 AAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFS 175



 Score = 33.5 bits (75), Expect = 9.1
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +3

Query: 237 FDPLGLAEVPENFERYKESELIHCRWAMLA 326
           FDPLG ++ P  FE YK  E+ + R AMLA
Sbjct: 169 FDPLGFSKDPVKFEEYKLKEIKNGRLAMLA 198


>tr|B6SSN3|B6SSN3_MAIZE Chlorophyll a-b binding protein 6A OS=Zea
           mays PE=2 SV=1
          Length = 245

 Score =  238 bits (606), Expect = 2e-61
 Identities = 125/188 (66%), Positives = 138/188 (73%), Gaps = 2/188 (1%)
 Frame = +3

Query: 30  VMATSTV--ASSAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPA 203
           VMA+S+   + SA  VPSL  P +RS  L    F   A TS   R++MSAEW+PGQPRPA
Sbjct: 2   VMASSSGLRSCSAVGVPSLLAPSSRSGRLAP--FCANATTSG--RVTMSAEWMPGQPRPA 57

Query: 204 HLDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQ 383
           HLDGSSPGDFGFDPLGLA VPENFER+KESE+ HCRWAMLAVPG+L+PEALGLGNWV AQ
Sbjct: 58  HLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGILVPEALGLGNWVKAQ 117

Query: 384 KWAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLR 563
           +WAA PGGQATYLG PVPWG LP               QR  EKDPEK+KYPGG FDPL 
Sbjct: 118 EWAAVPGGQATYLGAPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLG 177

Query: 564 FSSKIPKK 587
           F SK P K
Sbjct: 178 F-SKDPAK 184



 Score = 35.4 bits (80), Expect = 2.4
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 237 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEA 353
           FDPLG ++ P  FE YK  E+ + R AMLA  G  + ++
Sbjct: 173 FDPLGFSKDPAKFEEYKLKEIKNGRLAMLAFVGFCVQQS 211


>tr|B4XGT7|B4XGT7_9POAL Chloroplast chlorophyll a/b binding protein
           OS=Phyllostachys edulis GN=Lhca1 PE=2 SV=1
          Length = 246

 Score =  236 bits (601), Expect = 9e-61
 Identities = 115/171 (67%), Positives = 125/171 (73%)
 Frame = +3

Query: 57  SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHLDGSSPGDFG 236
           SA  VPSL  P +RS   G P     A+ +   R++MSAEW PGQPRPAHLDGSSPGDFG
Sbjct: 13  SAVGVPSLLAPSSRSGRSGLPFC---AYATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFG 69

Query: 237 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGGQAT 416
           FDPLGL  VPENFER+KESE+ HCRWAML VPGVL+PEALGLGNWV AQ+WAA PGGQAT
Sbjct: 70  FDPLGLGTVPENFERFKESEVYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAAVPGGQAT 129

Query: 417 YLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLRFS 569
           Y G PVPWGNLP               QR  EKDPEK+KYPGG FDPL FS
Sbjct: 130 YFGVPVPWGNLPTILAIEFLAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFS 180


>tr|A9T399|A9T399_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_139567 PE=4 SV=1
          Length = 241

 Score =  236 bits (601), Expect = 9e-61
 Identities = 118/179 (65%), Positives = 132/179 (73%)
 Frame = +3

Query: 33  MATSTVASSAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHLD 212
           MAT+  A  +++V  ++     S F GS + +     SNGSR+ M AEWLPG PRP++LD
Sbjct: 1   MATAAAAQVSRVVTGVATAQKSSFFAGSSSVSLLG-CSNGSRVCM-AEWLPGNPRPSYLD 58

Query: 213 GSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWA 392
           GS+PGDFGFDPLGL EVPEN ER+KESELIH RWAMLAVPGVL+PEALG GNWV AQKWA
Sbjct: 59  GSAPGDFGFDPLGLGEVPENLERFKESELIHARWAMLAVPGVLIPEALGYGNWVSAQKWA 118

Query: 393 ATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLRFS 569
           ATPGGQATYLGNPVPWGNLP               QRN E DPEKRKYPGG FDPL FS
Sbjct: 119 ATPGGQATYLGNPVPWGNLPVILAIEFLAIAFAESQRNGEPDPEKRKYPGGAFDPLGFS 177


>tr|Q40512|Q40512_TOBAC Photosystem I light-harvesting chlorophyll
           a/b-binding protein OS=Nicotiana tabacum GN=LHCI PE=2
           SV=1
          Length = 245

 Score =  235 bits (600), Expect = 1e-60
 Identities = 121/187 (64%), Positives = 138/187 (73%), Gaps = 2/187 (1%)
 Frame = +3

Query: 33  MATSTVASS--AQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAH 206
           MA++T+ S   A + PS+ L  + SKF  +     GA + N SR SMSAEW+PGQPRP +
Sbjct: 1   MASNTLMSCGIAAVSPSV-LSSSYSKFAVAVPVCVGAVSGN-SRFSMSAEWMPGQPRPPY 58

Query: 207 LDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQK 386
           LDGS+PGDFGFDPLGL EVP N ERYKESELIHCRWAMLAVPG+L+PEALGLGNWV AQ+
Sbjct: 59  LDGSAPGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQE 118

Query: 387 WAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLRF 566
           WAA PGGQATYLG PVPWG LP               QR+ EKDPEK+KYPGG FDPL +
Sbjct: 119 WAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 178

Query: 567 SSKIPKK 587
            SK PKK
Sbjct: 179 -SKDPKK 184


>tr|B7FH03|B7FH03_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 282

 Score =  235 bits (599), Expect = 2e-60
 Identities = 118/186 (63%), Positives = 139/186 (74%), Gaps = 1/186 (0%)
 Frame = +3

Query: 33  MATSTVASSA-QLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHL 209
           MA +T+ SSA    PSL L  ++S+F  S      A T+  SR +M+++W+PGQPRP++L
Sbjct: 1   MACNTLMSSAISAFPSL-LSSSKSRFSTSLPLPCTASTNASSRFTMTSDWMPGQPRPSYL 59

Query: 210 DGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKW 389
           DGS+PGDFGFDPL L EVPEN ER+KESELIHCRWAMLAVPG+L+PEALGLGNWV AQ+W
Sbjct: 60  DGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 119

Query: 390 AATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLRFS 569
           AA PGGQATYLGNPVPWG LP               QR+ EKDPEK+KYPGG FDPL + 
Sbjct: 120 AALPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKKYPGGAFDPLGY- 178

Query: 570 SKIPKK 587
           SK PKK
Sbjct: 179 SKDPKK 184



 Score = 34.3 bits (77), Expect = 5.3
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +3

Query: 237 FDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPE 350
           FDPLG ++ P+ F  YK  E+ + R A+LA  G+++ +
Sbjct: 173 FDPLGYSKDPKKFHEYKIKEVKNGRLALLAFVGIVVQQ 210


>tr|B4FZL4|B4FZL4_MAIZE Chlorophyll a-b binding protein 6A OS=Zea
           mays PE=2 SV=1
          Length = 249

 Score =  235 bits (599), Expect = 2e-60
 Identities = 119/172 (69%), Positives = 127/172 (73%), Gaps = 1/172 (0%)
 Frame = +3

Query: 57  SAQLVPSLSLPLTRSKFL-GSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAHLDGSSPGDF 233
           SA  VPSL  P T S    G   F   A TS   R++MSAEW+PGQPRPAHLDGSSPGDF
Sbjct: 14  SALGVPSLLAPSTSSSSRSGRLPFCAHATTSG--RVTMSAEWMPGQPRPAHLDGSSPGDF 71

Query: 234 GFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQKWAATPGGQA 413
           GFDPLGLA VPENFER+KESE+ HCRWAMLAVPGVL+PEALGLGNWV AQ+WAA PGGQA
Sbjct: 72  GFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVKAQEWAAVPGGQA 131

Query: 414 TYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLRFS 569
           TYLG PVPWG LP               QR  EKDPEK+KYPGG FDPL FS
Sbjct: 132 TYLGAPVPWGTLPTILAVEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFS 183


>tr|Q9C5R7|Q9C5R7_ARATH AT3g54890 OS=Arabidopsis thaliana
           GN=AT3g54890/F28P10_130 PE=2 SV=1
          Length = 241

 Score =  233 bits (595), Expect = 5e-60
 Identities = 117/187 (62%), Positives = 138/187 (73%), Gaps = 2/187 (1%)
 Frame = +3

Query: 33  MATSTVAS--SAQLVPSLSLPLTRSKFLGSPAFTPGAFTSNGSRLSMSAEWLPGQPRPAH 206
           MA++++ S   A + PSL L  ++SKF+ +    P A   N  R+ M+A W+PG+PRPA+
Sbjct: 1   MASNSLMSCGKAAVYPSL-LSSSKSKFVSAGVPLPNA--GNVGRIKMAAHWMPGEPRPAY 57

Query: 207 LDGSSPGDFGFDPLGLAEVPENFERYKESELIHCRWAMLAVPGVLLPEALGLGNWVDAQK 386
           LDGS+PGDFGFDPLGL EVP N ERYKESELIHCRWAMLAVPG+L+PEALG GNWV AQ+
Sbjct: 58  LDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQE 117

Query: 387 WAATPGGQATYLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLRF 566
           WAA PGGQATYLGNPVPWG LP               QR+ EKDPEK+KYPGG FDPL +
Sbjct: 118 WAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGY 177

Query: 567 SSKIPKK 587
            SK PKK
Sbjct: 178 -SKDPKK 183