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NBDC - LSDB Archive
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DK953794
Clone id TST39A01NGRL0018_L14
Library
Length 580
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_L14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CAGTTTGCATGTGGATGTAGAGATGGCGAACTTGCTTTCCTGTACCCTCCCTGCAGCAGC
GCCTTCCTGTGAGCTAAGGAGCTCCTTCATCGGCGAGGAATTCAGTCTAAGCACTGCAGA
GTTCAAGCCGAGAGCGCAAAATGGAGGTTTACTGAGGATCGAGTGCAAGGAGTCTAGGAT
TGGCAAGAAGCCCGTGACTGTCCTGAAAGGTGTGAGTGTGAACTTGGACAACCAGACCCT
CTTTGTAAAGGGTCCCCTTGGAGAGCTTGAAACGACATACCCGCGTGAAATCAAAGTTAA
AGTAGAGGAGAACACGAAAGTTTCTGTGATGGGAAGGGACAAGTGTGCGGTTGGTGATTT
CTCAGCGTCCATCCGCAAGTGGCGTCCTCCTGAACCATACAAGGGCAAAGGTATTAAGTA
TGCAGATGAGGTGATCCGCAGAAAAGAGGGCAAAGCCGGCAAGAAGAAATAAGTATTTTC
TGCAGTATCCTCTTTGTCTCTCTGCTTTTTTTTCAAAAGGGACTTCAGTTTTGGATGGGC
TGGAATTTTTTTGATTATGTGATGCGTCATCACGGGCAAT
■■Homology search results ■■ -
sp_hit_id O23049
Definition sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic OS=Arabidopsis thaliana
Align length 143
Score (bit) 92.0
E-value 2.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953794|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_L14, 5'
         (580 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic OS=A...    92   2e-18
sp|Q50303|RL6_MYCPN 50S ribosomal protein L6 OS=Mycoplasma pneum...    73   9e-13
sp|P47412|RL6_MYCGE 50S ribosomal protein L6 OS=Mycoplasma genit...    73   1e-12
sp|Q9Z7S1|RL6_CHLPN 50S ribosomal protein L6 OS=Chlamydia pneumo...    72   2e-12
sp|P51300|RK6_PORPU 50S ribosomal protein L6, chloroplastic OS=P...    72   2e-12
sp|Q1MPQ0|RL6_LAWIP 50S ribosomal protein L6 OS=Lawsonia intrace...    71   4e-12
sp|Q1XDI8|RK6_PORYE 50S ribosomal protein L6, chloroplastic OS=P...    71   4e-12
sp|Q18CH5|RL6_CLOD6 50S ribosomal protein L6 OS=Clostridium diff...    70   8e-12
sp|O51446|RL6_BORBU 50S ribosomal protein L6 OS=Borrelia burgdor...    70   8e-12
sp|Q250L7|RL6_DESHY 50S ribosomal protein L6 OS=Desulfitobacteri...    70   1e-11
sp|Q661C7|RL6_BORGA 50S ribosomal protein L6 OS=Borrelia garinii...    70   1e-11
sp|P73306|RL6_SYNY3 50S ribosomal protein L6 OS=Synechocystis sp...    69   1e-11
sp|O52347|RL6_MYCGA 50S ribosomal protein L6 OS=Mycoplasma galli...    69   1e-11
sp|A9NEE8|RL6_ACHLI 50S ribosomal protein L6 OS=Acholeplasma lai...    69   1e-11
sp|A2BYS2|RL6_PROM5 50S ribosomal protein L6 OS=Prochlorococcus ...    69   2e-11
sp|A0PXW1|RL6_CLONN 50S ribosomal protein L6 OS=Clostridium novy...    69   2e-11
sp|A9WSU3|RL6_RENSM 50S ribosomal protein L6 OS=Renibacterium sa...    68   3e-11
sp|A7GJ59|RL6_CLOBL 50S ribosomal protein L6 OS=Clostridium botu...    68   3e-11
sp|A5I7J1|RL6_CLOBH 50S ribosomal protein L6 OS=Clostridium botu...    68   3e-11
sp|A7FZ54|RL6_CLOB1 50S ribosomal protein L6 OS=Clostridium botu...    68   3e-11
sp|Q824N7|RL6_CHLCV 50S ribosomal protein L6 OS=Chlamydophila ca...    68   3e-11
sp|Q0SN14|RL6_BORAP 50S ribosomal protein L6 OS=Borrelia afzelii...    68   3e-11
sp|A1ALV6|RL6_PELPD 50S ribosomal protein L6 OS=Pelobacter propi...    68   4e-11
sp|Q2G8W5|RL6_NOVAD 50S ribosomal protein L6 OS=Novosphingobium ...    68   4e-11
sp|Q4G353|RK6_EMIHU 50S ribosomal protein L6, chloroplastic OS=E...    68   4e-11
sp|Q15X58|RL6_PSEA6 50S ribosomal protein L6 OS=Pseudoalteromona...    67   5e-11
sp|Q6ME49|RL6_PARUW 50S ribosomal protein L6 OS=Protochlamydia a...    67   5e-11
sp|Q9XD21|RL6_LEPIN 50S ribosomal protein L6 OS=Leptospira inter...    67   5e-11
sp|Q72NH6|RL6_LEPIC 50S ribosomal protein L6 OS=Leptospira inter...    67   5e-11
sp|Q04PV3|RL6_LEPBJ 50S ribosomal protein L6 OS=Leptospira borgp...    67   5e-11

>sp|O23049|RK6_ARATH 50S ribosomal protein L6, chloroplastic
           OS=Arabidopsis thaliana GN=RPL6 PE=1 SV=1
          Length = 223

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
 Frame = +2

Query: 35  LSCTLPAAAPSCELRSSFIGEEFSLSTAEFKPRAQNGGLLRIECKESRIG------KKPV 196
           L+ T P      +  S F+  +    T E +   Q  GL R       +G      KK +
Sbjct: 75  LALTYPREVELTKEESGFLRVK---KTVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLI 131

Query: 197 TVLKGVSVNLDNQTLFVK-GPLGELETTYPREIKVKVEENTKVSVMGRDKCAVGDFSASI 373
            V  G    +D + L +  G    ++   P  +KVKVEENT+++V G DK  +G F+A++
Sbjct: 132 LVGVGYRATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVSGYDKSEIGQFAATV 191

Query: 374 RKWRPPEPYKGKGIKYADEVIRR 442
           RKWRPPEPYKGKG+KY+DE++RR
Sbjct: 192 RKWRPPEPYKGKGVKYSDEIVRR 214



 Score = 71.6 bits (174), Expect = 3e-12
 Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
 Frame = +2

Query: 65  SCELRSSFIGEE--FSLSTAEFKPRAQNGGLLR-IECKESRIGKKPVTVLKGVSVNLDNQ 235
           S + RS+F+G+   F +S+  F   AQ G   + IECKESRIGK+P+ V   V++ L+ Q
Sbjct: 8   SFQPRSAFLGDRNVFKVSSTPF---AQVGYSSKTIECKESRIGKQPIAVPSNVTIALEGQ 64

Query: 236 TLFVKGPLGELETTYPREIKVKVEEN 313
            L VKGPLGEL  TYPRE+++  EE+
Sbjct: 65  DLKVKGPLGELALTYPREVELTKEES 90


>sp|Q50303|RL6_MYCPN 50S ribosomal protein L6 OS=Mycoplasma
           pneumoniae GN=rplF PE=3 SV=1
          Length = 184

 Score = 73.2 bits (178), Expect = 9e-13
 Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = +2

Query: 185 KKPVTVLKGVSVNLDNQTLFVK-GPLGELETTYPREIKVKVEENTKVSVMGRDKCAVGDF 361
           KK   V  G   N++ +TL ++ G    ++   P+ + VKVE+NT++++ G  K  VG F
Sbjct: 88  KKLRLVGVGYRANVEGETLNLQLGYSHPIKEKIPKGLTVKVEKNTEITISGISKELVGQF 147

Query: 362 SASIRKWRPPEPYKGKGIKYADEVIRR 442
           +  +RKWR PEPYKGKG+ Y DEVI R
Sbjct: 148 ATEVRKWRKPEPYKGKGVLYFDEVIVR 174



 Score = 32.7 bits (73), Expect = 1.3
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +2

Query: 173 SRIGKKPVTVLKG-VSVNLDNQTLFVKGPLGELETTYPREIKVKVE 307
           S+IG + +T+    V++N     + VKGPLG++E   P  + +K E
Sbjct: 2   SKIGNRTITLDPAKVNLNFQKDHIAVKGPLGQIELKLPPNLPLKFE 47


>sp|P47412|RL6_MYCGE 50S ribosomal protein L6 OS=Mycoplasma
           genitalium GN=rplF PE=3 SV=1
          Length = 184

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = +2

Query: 185 KKPVTVLKGVSVNLDNQTLFVK-GPLGELETTYPREIKVKVEENTKVSVMGRDKCAVGDF 361
           KK + V  G   N++ Q L ++ G    ++   P ++ VKVE+NT++++ G  K  VG F
Sbjct: 88  KKLILVGVGYRANVEGQFLNLQLGYSHPIKELIPNQLTVKVEKNTEITISGIKKELVGQF 147

Query: 362 SASIRKWRPPEPYKGKGIKYADEVIRR 442
           +  IRKWR PEPYKGKG+ Y +EVI R
Sbjct: 148 ATEIRKWRKPEPYKGKGVLYFNEVIVR 174


>sp|Q9Z7S1|RL6_CHLPN 50S ribosomal protein L6 OS=Chlamydia
           pneumoniae GN=rplF PE=3 SV=1
          Length = 183

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
 Frame = +2

Query: 209 GVSVNLDNQTLFVKGPLGELETT---YPREIKVKVEENTKVSVMGRDKCAVGDFSASIRK 379
           GV      Q  F+   +G    T    P  ++V VE+NT +SV G DK  VG+F+ASIR 
Sbjct: 92  GVGFRASVQGAFLDLSIGVSHPTKIPIPSTLQVSVEKNTLISVKGLDKQLVGEFAASIRA 151

Query: 380 WRPPEPYKGKGIKYADEVIRR 442
            RPPEPYKGKGI+Y +E +RR
Sbjct: 152 KRPPEPYKGKGIRYENEYVRR 172


>sp|P51300|RK6_PORPU 50S ribosomal protein L6, chloroplastic
           OS=Porphyra purpurea GN=rpl6 PE=3 SV=1
          Length = 180

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = +2

Query: 209 GVSVNLDNQTLFVKGPLGELETTYP-REIKVKVEENTKVSVMGRDKCAVGDFSASIRKWR 385
           G    +DN  L +      + T  P + I++KVE NT ++V+G DK  VG  ++SIR  R
Sbjct: 93  GYRSQIDNNNLILSVGYSHVVTIQPPQNIEIKVENNTSITVLGIDKEVVGQVASSIRSIR 152

Query: 386 PPEPYKGKGIKYADEVIR 439
           PPEPYKGKGI+Y  EV+R
Sbjct: 153 PPEPYKGKGIRYQGEVVR 170



 Score = 40.8 bits (94), Expect = 0.005
 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +2

Query: 173 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELETTYPREIKVKVEENT-KVSVMGRDKCA 349
           SRIGKK V +   +S   D QT+ V GP G L  T P  I +++ + T  V   G  K A
Sbjct: 2   SRIGKKIVLLPTNISTQFDGQTITVNGPKGTLLRTLPEGITLEINDGTILVQTSGNSKRA 61


>sp|Q1MPQ0|RL6_LAWIP 50S ribosomal protein L6 OS=Lawsonia
           intracellularis (strain PHE/MN1-00) GN=rplF PE=3 SV=1
          Length = 181

 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 48/138 (34%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
 Frame = +2

Query: 62  PSCELRSSFIGEEFSLSTAEFKPRAQNGGLLRIECKESRIGKKPVTVLKGVSVNLD---- 229
           P CEL S    E+  + T  F  R     L +   + + +      V KG S  L+    
Sbjct: 36  PKCELLSYEHKEDKIILTCNFDTRES---LAQYGLRRTLLANCIEGVTKGFSKTLEVIGV 92

Query: 230 NQTLFVKGPLGELETTYPREIKVKVE-------ENTKVSVMGRDKCAVGDFSASIRKWRP 388
              + VKG + EL   Y   + +++        E  K+++MG DK  VG+ +A IR+ R 
Sbjct: 93  GYRVSVKGNIVELSVGYSHPVHIELPDGITAKAEGQKLTIMGSDKVLVGEMAARIRRIRK 152

Query: 389 PEPYKGKGIKYADEVIRR 442
           PEPYKGKGIKY  E+IRR
Sbjct: 153 PEPYKGKGIKYESEIIRR 170



 Score = 30.8 bits (68), Expect = 5.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 173 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELET 274
           SRIGK P+ +  GV +    + + +KGP   L T
Sbjct: 2   SRIGKLPIMIPAGVEITFGEKNISIKGPKATLVT 35


>sp|Q1XDI8|RK6_PORYE 50S ribosomal protein L6, chloroplastic
           OS=Porphyra yezoensis GN=rpl6 PE=3 SV=1
          Length = 180

 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 55/143 (38%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
 Frame = +2

Query: 35  LSCTLPAAAPSCELRSSFIGEEFSLSTAEFKPRAQNGGLLR------IECKESRIGKKPV 196
           LS TLPA   + E+ +  I  + S  T   K  +Q  GL R      IE   +   KK  
Sbjct: 33  LSRTLPAGI-NLEILNDTIAVKTSGQT---KMASQLHGLSRTLISNMIEGVSNGFFKKLQ 88

Query: 197 TVLKGVSVNLDNQTLFVK-GPLGELETTYPREIKVKVEENTKVSVMGRDKCAVGDFSASI 373
               G    +DNQ L +  G    ++   P  I++KVE NT ++V G DK  VG  +++I
Sbjct: 89  IQGVGYRSQIDNQDLILSVGYSHVVKIKPPANIEIKVENNTNITVSGIDKEVVGQVASTI 148

Query: 374 RKWRPPEPYKGKGIKYADEVIRR 442
           R  RPPEPYKGKGI+Y  E +RR
Sbjct: 149 RSIRPPEPYKGKGIRYQGEFVRR 171



 Score = 40.0 bits (92), Expect = 0.008
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +2

Query: 173 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELETTYPREIKVKVEENT-KVSVMGRDKCA 349
           SRIGKK + +   +S   D QT+ V GP G L  T P  I +++  +T  V   G+ K A
Sbjct: 2   SRIGKKIILLPTNLSTQFDGQTITVTGPKGTLSRTLPAGINLEILNDTIAVKTSGQTKMA 61


>sp|Q18CH5|RL6_CLOD6 50S ribosomal protein L6 OS=Clostridium
           difficile (strain 630) GN=rplF PE=3 SV=1
          Length = 180

 Score = 70.1 bits (170), Expect = 8e-12
 Identities = 40/83 (48%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
 Frame = +2

Query: 203 LKGVSVNLDNQTLFVKGPLG---ELETTYPREIKVKVEENTKVSVMGRDKCAVGDFSASI 373
           LKGV      Q   +   LG    +E   P  I V+    T++ V G DK  VG+++A I
Sbjct: 90  LKGVGYRAQKQGKKLVMNLGFSHPVEMEDPEGITVEAPNQTELIVKGIDKQLVGNYAAKI 149

Query: 374 RKWRPPEPYKGKGIKYADEVIRR 442
           R WR PEPYKGKGIKY DEVIRR
Sbjct: 150 RAWRKPEPYKGKGIKYVDEVIRR 172



 Score = 39.7 bits (91), Expect = 0.011
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +2

Query: 173 SRIGKKPVTVLKGVSVNL-DNQTLFVKGPLGELETTYPREIKVKVEENT 316
           SRIG KP+ +  GV V + +   + VKGP G L      E+ +K EENT
Sbjct: 2   SRIGVKPIIIPAGVEVTIAEGNLVTVKGPKGTLTKQLSAELNIKKEENT 50


>sp|O51446|RL6_BORBU 50S ribosomal protein L6 OS=Borrelia
           burgdorferi GN=rplF PE=3 SV=1
          Length = 180

 Score = 70.1 bits (170), Expect = 8e-12
 Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
 Frame = +2

Query: 209 GVSVNLDNQTLFVK-GPLGELETTYPREIKVKVEENTKVSVMGRDKCAVGDFSASIRKWR 385
           G  V     +LF+  G   + E   P  I VK++ NTK+SV G DK  VG  +A IR  +
Sbjct: 93  GYRVEQQGNSLFLSLGYSTQFEYVIPDGISVKLDGNTKISVEGIDKFKVGQVAAEIRSLK 152

Query: 386 PPEPYKGKGIKYADEVIRR 442
            PEPYKGKGIKY +EVIRR
Sbjct: 153 KPEPYKGKGIKYDNEVIRR 171


>sp|Q250L7|RL6_DESHY 50S ribosomal protein L6 OS=Desulfitobacterium
           hafniense (strain Y51) GN=rplF PE=3 SV=1
          Length = 184

 Score = 69.7 bits (169), Expect = 1e-11
 Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
 Frame = +2

Query: 200 VLKGVSVNLD------------NQTLFVKGPLGELETTYPREIKVKVEENTKVSVMGRDK 343
           V KG S +LD            N+ +   G    +E      I+V+V    K+ V G DK
Sbjct: 79  VTKGFSKSLDMVGVGYRAAKQGNKLVLSVGKSHPVELIPFEGIEVEVPAQNKIIVKGMDK 138

Query: 344 CAVGDFSASIRKWRPPEPYKGKGIKYADEVIRR 442
             VGDF+A IRK RPPEPYKGKGIKY +EV+RR
Sbjct: 139 ELVGDFAAEIRKERPPEPYKGKGIKYENEVVRR 171



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = +2

Query: 173 SRIGKKPVTVLKGVSVNLDNQTLFVKGPLGELETTYPREIKVKVEE 310
           SRIGK+P+++  GV VN++   + VKGP G L       I + VEE
Sbjct: 2   SRIGKRPISIPGGVDVNIEGNVVTVKGPKGTLTKEMHSLINIAVEE 47
tr_hit_id A9U246
Definition tr|A9U246|A9U246_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 54
Score (bit) 98.2
E-value 3.0e-19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953794|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_L14, 5'
         (580 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U246|A9U246_PHYPA Predicted protein OS=Physcomitrella paten...    98   3e-19
tr|A9SYQ3|A9SYQ3_PHYPA Predicted protein OS=Physcomitrella paten...    98   4e-19
tr|A7PXG7|A7PXG7_VITVI Chromosome chr12 scaffold_36, whole genom...    92   2e-17
tr|B6SL57|B6SL57_MAIZE 50S ribosomal protein L6 OS=Zea mays PE=2...    91   5e-17
tr|B6SMY4|B6SMY4_MAIZE 50S ribosomal protein L6 OS=Zea mays PE=2...    91   6e-17
tr|A9NKY9|A9NKY9_PICSI Putative uncharacterized protein OS=Picea...    89   2e-16
tr|Q850L8|Q850L8_ORYSJ Os03g0751400 protein OS=Oryza sativa subs...    88   4e-16
tr|Q7Y029|Q7Y029_ORYSJ Putative ribosomal protein CtrL6e, 5'-par...    88   4e-16
tr|A2XM21|A2XM21_ORYSI Putative uncharacterized protein OS=Oryza...    88   4e-16
tr|Q10L93|Q10L93_ORYSJ Os03g0356300 protein OS=Oryza sativa subs...    87   5e-16
tr|A3AI13|A3AI13_ORYSJ Putative uncharacterized protein OS=Oryza...    87   5e-16
tr|A2XGS7|A2XGS7_ORYSI Putative uncharacterized protein OS=Oryza...    87   5e-16
tr|B6UCF0|B6UCF0_MAIZE 50S ribosomal protein L6 OS=Zea mays PE=2...    87   9e-16
tr|B6T4J1|B6T4J1_MAIZE 50S ribosomal protein L6 OS=Zea mays PE=2...    86   2e-15
tr|Q4C157|Q4C157_CROWT 50S ribosomal protein L6 OS=Crocosphaera ...    72   2e-11
tr|A5P6X8|A5P6X8_9SPHN 50S ribosomal protein L6 OS=Erythrobacter...    72   2e-11
tr|B5RPJ7|B5RPJ7_BORRA 50S ribosomal protein L6 OS=Borrelia recu...    72   2e-11
tr|B5RM51|B5RM51_BORDL 50S ribosomal protein L6 OS=Borrelia dutt...    72   2e-11
tr|A8J503|A8J503_CHLRE Plastid ribosomal protein L6 OS=Chlamydom...    72   2e-11
tr|A3IQ18|A3IQ18_9CHRO 50S ribosomal protein L6 OS=Cyanothece sp...    71   4e-11
tr|B1WQS5|B1WQS5_CYAA5 50S ribosomal protein L6 OS=Cyanothece (s...    71   5e-11
tr|B5EFR5|B5EFR5_GEOBB Ribosomal protein L6 OS=Geobacter bemidji...    70   7e-11
tr|B3E0J9|B3E0J9_METI4 Ribosomal protein L6P OS=Methylacidiphilu...    70   9e-11
tr|B2UQM5|B2UQM5_AKKM8 Ribosomal protein L6 OS=Akkermansia mucin...    70   9e-11
tr|B7XTZ3|B7XTZ3_BORGA 50S ribosomal protein L6 OS=Borrelia gari...    70   9e-11
tr|B7XRN9|B7XRN9_BORGA 50S ribosomal protein L6 OS=Borrelia gari...    70   9e-11
tr|B7J258|B7J258_BORBU Putative ribosomal protein L6 OS=Borrelia...    70   9e-11
tr|B3K2P7|B3K2P7_9DELT Ribosomal protein L6 OS=Geobacter sp. M21...    70   9e-11
tr|B2S0J6|B2S0J6_BORHD LSU ribosomal protein L6P OS=Borrelia her...    70   1e-10
tr|B8G1Y1|B8G1Y1_DESHD Ribosomal protein L6 OS=Desulfitobacteriu...    70   1e-10

>tr|A9U246|A9U246_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_200465 PE=3 SV=1
          Length = 229

 Score = 98.2 bits (243), Expect = 3e-19
 Identities = 44/54 (81%), Positives = 49/54 (90%)
 Frame = +2

Query: 281 PREIKVKVEENTKVSVMGRDKCAVGDFSASIRKWRPPEPYKGKGIKYADEVIRR 442
           P  I VKVEENT+V V G+DKCAVGDFSA++RKWRPPEPYKGKGIKY+DEVIRR
Sbjct: 167 PEAITVKVEENTRVIVSGKDKCAVGDFSAAVRKWRPPEPYKGKGIKYSDEVIRR 220



 Score = 81.6 bits (200), Expect = 3e-14
 Identities = 49/90 (54%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
 Frame = +2

Query: 35  LSCTLPAAAPSCELRSSFIGEEFSLSTAEF--KPRAQNGGLLRIECKESRIGKKPVTVLK 208
           L+C+L A   S  LRSSF GE   +  A    + + Q  G L IE KESRIGK P+ V K
Sbjct: 4   LACSLSAPCSS-SLRSSFQGESLIVDNAGSLCQVQLQGKGALVIEAKESRIGKAPIPVPK 62

Query: 209 GVSVNLDNQTLFVKGPLGELETTYPREIKV 298
           GV+VNLD Q L VKG LGEL  TYPRE+K+
Sbjct: 63  GVTVNLDGQNLSVKGALGELVRTYPREVKL 92


>tr|A9SYQ3|A9SYQ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110132 PE=3 SV=1
          Length = 230

 Score = 97.8 bits (242), Expect = 4e-19
 Identities = 42/54 (77%), Positives = 50/54 (92%)
 Frame = +2

Query: 281 PREIKVKVEENTKVSVMGRDKCAVGDFSASIRKWRPPEPYKGKGIKYADEVIRR 442
           P +I VKVEENT+V + G+DKC+VGDFSA++RKWRPPEPYKGKGIKY+DEVIRR
Sbjct: 168 PEDITVKVEENTRVLISGKDKCSVGDFSAAVRKWRPPEPYKGKGIKYSDEVIRR 221



 Score = 84.7 bits (208), Expect = 3e-15
 Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
 Frame = +2

Query: 35  LSCTLPAAAPSCELRSSFIGEEFSLS--TAEFKPRAQNG-GLLRIECKESRIGKKPVTVL 205
           L+C+L A   S  LRSSF GE       ++ ++ + Q G G LRI+ KESRIGK P+ V 
Sbjct: 4   LACSLSAPCSS-SLRSSFQGESLVTGNPSSSYQVQQQQGKGALRIKAKESRIGKAPIPVP 62

Query: 206 KGVSVNLDNQTLFVKGPLGELETTYPREIKV 298
           KGV++NL+ Q+L VKGPLGEL  TYPRE+K+
Sbjct: 63  KGVTINLEGQSLTVKGPLGELARTYPREVKL 93


>tr|A7PXG7|A7PXG7_VITVI Chromosome chr12 scaffold_36, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026031001
           PE=3 SV=1
          Length = 117

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 37/54 (68%), Positives = 48/54 (88%)
 Frame = +2

Query: 281 PREIKVKVEENTKVSVMGRDKCAVGDFSASIRKWRPPEPYKGKGIKYADEVIRR 442
           P ++KVKVE+NT++ V G DKC +G F+AS+RKWRPPEPYKGKG+KYADE++RR
Sbjct: 55  PGDLKVKVEDNTRIIVSGYDKCNIGQFAASVRKWRPPEPYKGKGVKYADEIVRR 108


>tr|B6SL57|B6SL57_MAIZE 50S ribosomal protein L6 OS=Zea mays PE=2
           SV=1
          Length = 224

 Score = 90.9 bits (224), Expect = 5e-17
 Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
 Frame = +2

Query: 113 TAEFKPRAQNGGLLRIECKESRIG------KKPVTVLKGVSVNLDNQTLFVK-GPLGELE 271
           T E +   Q  GL R       +G      KK + V  G    ++ + L +  G    ++
Sbjct: 99  TVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLIVVGVGYRATVEGKELVLNLGFSHPVK 158

Query: 272 TTYPREIKVKVEENTKVSVMGRDKCAVGDFSASIRKWRPPEPYKGKGIKYADEVIRR 442
              P  +KVKVEENT+++V G DK  +G F+A++RKWRPPEPYKGKG+KY+DE++RR
Sbjct: 159 MQIPESLKVKVEENTRITVSGYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDEIVRR 215



 Score = 73.6 bits (179), Expect = 8e-12
 Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
 Frame = +2

Query: 65  SCELRSSFIGEEFSLSTAEFKPRAQNGGLLR-IECKESRIGKKPVTVLKGVSVNLDNQTL 241
           S + RSSF+G+  +   +   P  Q G   + IECKESRIGK+P++V   V++ L+ Q L
Sbjct: 8   SFQPRSSFLGDRNAFKVSTTPPFTQVGFSSKTIECKESRIGKQPISVPSNVTIALEGQDL 67

Query: 242 FVKGPLGELETTYPREIKVKVEEN 313
            VKGPLGEL  TYPRE+++  E++
Sbjct: 68  KVKGPLGELALTYPREVELLKEDS 91


>tr|B6SMY4|B6SMY4_MAIZE 50S ribosomal protein L6 OS=Zea mays PE=2
           SV=1
          Length = 223

 Score = 90.5 bits (223), Expect = 6e-17
 Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
 Frame = +2

Query: 113 TAEFKPRAQNGGLLRIECKESRIG------KKPVTVLKGVSVNLDNQTLFVK-GPLGELE 271
           T E +   Q  GL R       +G      KK + V  G    ++ + L +  G    ++
Sbjct: 98  TVETRRANQMHGLFRTLTDNMVVGVSKGFEKKLILVGVGYRATVEGKELVLNLGFSHPVK 157

Query: 272 TTYPREIKVKVEENTKVSVMGRDKCAVGDFSASIRKWRPPEPYKGKGIKYADEVIRR 442
              P  +KVKVEENT+++V G DK  +G F+A++RKWRPPEPYKGKG+KY+DE++RR
Sbjct: 158 MQIPESLKVKVEENTRITVSGYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDEIVRR 214



 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 38/83 (45%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
 Frame = +2

Query: 65  SCELRSSFIGEEFSLSTAEFKPRAQNGGLLR-IECKESRIGKKPVTVLKGVSVNLDNQTL 241
           S + RS+F+G+  ++      P AQ G   + I+CKESRIGK+P+ V   V++ L+ Q L
Sbjct: 8   SFQPRSAFLGDR-NVFKVSATPSAQVGYSRKTIQCKESRIGKQPIAVPTNVTIALEGQDL 66

Query: 242 FVKGPLGELETTYPREIKVKVEE 310
            VKGPLGEL  TYPRE+++  E+
Sbjct: 67  KVKGPLGELALTYPREVELIKED 89


>tr|A9NKY9|A9NKY9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 231

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 41/54 (75%), Positives = 44/54 (81%)
 Frame = +2

Query: 281 PREIKVKVEENTKVSVMGRDKCAVGDFSASIRKWRPPEPYKGKGIKYADEVIRR 442
           P  IKV VE NT ++V GRDK  VG F+A IRKWRPPEPYKGKGIKYADEVIRR
Sbjct: 169 PAGIKVTVEANTSITVSGRDKSVVGQFAADIRKWRPPEPYKGKGIKYADEVIRR 222



 Score = 70.1 bits (170), Expect = 9e-11
 Identities = 40/83 (48%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
 Frame = +2

Query: 65  SCELRSSFIGEEFSLSTAEFKPRAQNGGLLR----IECKESRIGKKPVTVLKGVSVNLDN 232
           +C LRS+ +GE+  L  A  +P      L      IECKESRIGKKPV V   V++ L+ 
Sbjct: 12  ACALRSTLLGEDNGLKAARDRPAIAIVKLPSVRPTIECKESRIGKKPVVVPANVNITLEG 71

Query: 233 QTLFVKGPLGELETTYPREIKVK 301
           Q + V G LGEL  TYP EIKV+
Sbjct: 72  QHIRVNGLLGELSQTYPNEIKVE 94


>tr|Q850L8|Q850L8_ORYSJ Os03g0751400 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0032E21.12 PE=2 SV=1
          Length = 226

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +2

Query: 281 PREIKVKVEENTKVSVMGRDKCAVGDFSASIRKWRPPEPYKGKGIKYADEVIRR 442
           P  +KVKVEENT++ V G DK  +G F+ASI+KWRPPEPYKGKGI+YADEV+RR
Sbjct: 164 PEGLKVKVEENTRIIVSGYDKSEIGQFAASIKKWRPPEPYKGKGIRYADEVVRR 217



 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = +2

Query: 68  CELRSSFIGEEFSLSTAEFKPRAQNGGLLR--IECKESRIGKKPVTVLKGVSVNLDNQTL 241
           C  R+ F+G+   +        A   G +R  IECKESRIGKKP+ V   V++ L+ Q +
Sbjct: 12  CNSRTGFLGKRQGICLHVIP--AGRVGFVRKTIECKESRIGKKPIEVPSNVTLTLEEQFI 69

Query: 242 FVKGPLGELETTYPREIKVKVEENTKVSV 328
             KGPLGEL   YP E+KV  EE+ K+ V
Sbjct: 70  KAKGPLGELSLNYPGEVKVVKEESGKLRV 98


>tr|Q7Y029|Q7Y029_ORYSJ Putative ribosomal protein CtrL6e,
           5'-partial (Fragment) OS=Oryza sativa subsp. japonica
           GN=OJ1112_G08.1 PE=3 SV=1
          Length = 111

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +2

Query: 281 PREIKVKVEENTKVSVMGRDKCAVGDFSASIRKWRPPEPYKGKGIKYADEVIRR 442
           P  +KVKVEENT++ V G DK  +G F+ASI+KWRPPEPYKGKGI+YADEV+RR
Sbjct: 49  PEGLKVKVEENTRIIVSGYDKSEIGQFAASIKKWRPPEPYKGKGIRYADEVVRR 102


>tr|A2XM21|A2XM21_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_13529 PE=3 SV=1
          Length = 226

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = +2

Query: 281 PREIKVKVEENTKVSVMGRDKCAVGDFSASIRKWRPPEPYKGKGIKYADEVIRR 442
           P  +KVKVEENT++ V G DK  +G F+ASI+KWRPPEPYKGKGI+YADEV+RR
Sbjct: 164 PEGLKVKVEENTRIIVSGYDKSEIGQFAASIKKWRPPEPYKGKGIRYADEVVRR 217



 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
 Frame = +2

Query: 68  CELRSSFIGEEFSLSTAEFKPRAQNGGLLR--IECKESRIGKKPVTVLKGVSVNLDNQTL 241
           C  R+ F+G+   +        A   G +R  IECKESRIGKKP+ V   V++ L+ Q +
Sbjct: 12  CNSRTGFLGKRQGICLHVIP--AGRVGFVRKTIECKESRIGKKPIEVPSNVTLTLEEQFI 69

Query: 242 FVKGPLGELETTYPREIKVKVEENTKVSV 328
             KGPLGEL   YP E+KV  EE+ K+ V
Sbjct: 70  KAKGPLGELSLNYPGEVKVVKEESGKLRV 98


>tr|Q10L93|Q10L93_ORYSJ Os03g0356300 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0356300 PE=2 SV=1
          Length = 226

 Score = 87.4 bits (215), Expect = 5e-16
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = +2

Query: 281 PREIKVKVEENTKVSVMGRDKCAVGDFSASIRKWRPPEPYKGKGIKYADEVIRR 442
           P  +KVKVEENT++ V G DK  +G F+ASI+KWRPPEPYKGKGI+YADE++RR
Sbjct: 164 PEGLKVKVEENTRIIVSGYDKSEIGQFAASIKKWRPPEPYKGKGIRYADEIVRR 217



 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
 Frame = +2

Query: 50  PAAAPSCELRSSFIGEEFSLSTAEFKPRAQNGGLLR--IECKESRIGKKPVTVLKGVSVN 223
           P+    C  R+ F G+   +        A   G +R  +ECKESRIGKKP+ V   V++ 
Sbjct: 6   PSLHLPCNSRTGFAGKTQGIRLRVIP--AGRVGFVRTTVECKESRIGKKPIEVPSNVTLT 63

Query: 224 LDNQTLFVKGPLGELETTYPREIKVKVEENTKVSV 328
           L+ Q +  KGPLGEL   YP E+KV  EE+ K+ V
Sbjct: 64  LEEQFIKAKGPLGELSLNYPGEVKVVKEESGKLRV 98