| DK953827 |
| Clone id |
TST39A01NGRL0018_N01 |
| Library |
TST39 |
| Length |
580 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_N01. 5' end sequence. |
| Accession |
DK953827 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL4029Contig1 |
| Sequence |
TGCATCATCAGCTGCGTACACACACACACACACACACACACACACAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGAGAGAGAGCGCCAACCATGGATGGTCCTTCCTCCTACGGTCGA CAACCCTCCCGCAGGCAATCGCTGCAGAAAATGCCCTCCATGGATGAGCACATGCGTAAG CTCGTACCCCGCAAAGTTACCGATGACGACCATCTTATTGAATATGACGCTCTTCTTTTG GACCGCTTCATGGACATCTTACAAGACTTGCATGGAGATGAAATGCGGGAGAAGGTACAA TTATGCTATGAGCTTGCAAGCGAATGTGAAAATGCAGAGTCAACTGACAAAGACAAGAAA CTTGAGGAGCTTGCTGAAGTTTTGAAAAATATGGATCCAGGAGATTCAATAGTAGTAGCA AGCTCCTTCTCGCACATGCTTAATCTGACAAACCTTGCAGAGGAGGTACAAATTGCATTC CGTCGAAGAGTGAAGCTTAAGAAGAGAGAGTTTGGGGATGAAAATAGTGCGATAACTGAG TCTGATCTAGAAGAGACATTCAGGAGGTTGGTGACTGATT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P29194 |
| Definition |
sp|P29194|CAPP2_SORBI Phosphoenolpyruvate carboxylase 2 OS=Sorghum bicolor |
| Align length |
146 |
| Score (bit) |
193.0 |
| E-value |
6.0e-49 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953827|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_N01, 5' (580 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P29194|CAPP2_SORBI Phosphoenolpyruvate carboxylase 2 OS=Sorgh... 193 6e-49 sp|P27154|CAPP_TOBAC Phosphoenolpyruvate carboxylase OS=Nicotian... 192 1e-48 sp|P51059|CAPP2_MAIZE Phosphoenolpyruvate carboxylase 2 OS=Zea m... 191 3e-48 sp|P29196|CAPP_SOLTU Phosphoenolpyruvate carboxylase OS=Solanum ... 189 7e-48 sp|Q9MAH0|CAPP1_ARATH Phosphoenolpyruvate carboxylase 1 OS=Arabi... 187 2e-47 sp|Q01647|CAPP1_FLAPR Phosphoenolpyruvate carboxylase OS=Flaveri... 187 3e-47 sp|P51063|CAPP_PICAB Phosphoenolpyruvate carboxylase OS=Picea ab... 186 6e-47 sp|Q84VW9|CAPP3_ARATH Phosphoenolpyruvate carboxylase 3 OS=Arabi... 184 2e-46 sp|Q01648|CAPP1_FLATR Phosphoenolpyruvate carboxylase OS=Flaveri... 184 3e-46 sp|P29193|CAPP1_SACHY Phosphoenolpyruvate carboxylase, housekeep... 183 5e-46 sp|Q42730|CAPP_FLAAU Phosphoenolpyruvate carboxylase OS=Flaveria... 181 2e-45 sp|P30694|CAPP2_FLATR Phosphoenolpyruvate carboxylase OS=Flaveri... 181 2e-45 sp|P16097|CAPP2_MESCR Phosphoenolpyruvate carboxylase 2 OS=Mesem... 181 3e-45 sp|Q02909|CAPP1_SOYBN Phosphoenolpyruvate carboxylase, housekeep... 180 4e-45 sp|P51061|CAPP2_SOYBN Phosphoenolpyruvate carboxylase OS=Glycine... 179 1e-44 sp|Q9AU12|CAPP_PHAVU Phosphoenolpyruvate carboxylase OS=Phaseolu... 177 3e-44 sp|Q02735|CAPP_MEDSA Phosphoenolpyruvate carboxylase OS=Medicago... 177 3e-44 sp|Q5GM68|CAPP2_ARATH Phosphoenolpyruvate carboxylase 2 OS=Arabi... 176 6e-44 sp|P51062|CAPP_PEA Phosphoenolpyruvate carboxylase OS=Pisum sati... 175 1e-43 sp|P29195|CAPP1_SORBI Phosphoenolpyruvate carboxylase 1 OS=Sorgh... 172 1e-42 sp|P10490|CAPP1_MESCR Phosphoenolpyruvate carboxylase 1 OS=Mesem... 171 3e-42 sp|Q43299|CAPP_AMAHP Phosphoenolpyruvate carboxylase OS=Amaranth... 170 5e-42 sp|P04711|CAPP1_MAIZE Phosphoenolpyruvate carboxylase 1 OS=Zea m... 156 8e-38 sp|P15804|CAPP3_SORBI Phosphoenolpyruvate carboxylase 3 OS=Sorgh... 143 7e-34 sp|P81831|CAPP1_CHLRE Phosphoenolpyruvate carboxylase 1 OS=Chlam... 51 4e-06 sp|Q7MH68|CAPP_VIBVY Phosphoenolpyruvate carboxylase OS=Vibrio v... 45 2e-04 sp|Q8DCN2|CAPP_VIBVU Phosphoenolpyruvate carboxylase OS=Vibrio v... 45 2e-04 sp|Q0AH90|CAPP_NITEC Phosphoenolpyruvate carboxylase OS=Nitrosom... 45 3e-04 sp|A0KFU8|CAPP_AERHH Phosphoenolpyruvate carboxylase OS=Aeromona... 45 3e-04 sp|Q6LVH1|CAPP_PHOPR Phosphoenolpyruvate carboxylase OS=Photobac... 44 4e-04
>sp|P29194|CAPP2_SORBI Phosphoenolpyruvate carboxylase 2 OS=Sorghum bicolor PE=3 SV=1 Length = 960
Score = 193 bits (490), Expect = 6e-49 Identities = 94/146 (64%), Positives = 121/146 (82%) Frame = +1
Query: 142 LQKMPSMDEHMRKLVPRKVTDDDHLIEYDALLLDRFMDILQDLHGDEMREKVQLCYELAS 321 ++++ S+D +R LVP KV++DD LIEYDALLLDRF+DILQDLHGD+++E VQ CYE+A+ Sbjct: 1 MERLSSIDAQLRMLVPGKVSEDDKLIEYDALLLDRFLDILQDLHGDDLKEMVQECYEVAA 60
Query: 322 ECENAESTDKDKKLEELAEVLKNMDPGDSIVVASSFSHMLNLTNLAEEVQIAFRRRVKLK 501 E E +KL+EL +++ ++DPGDSIV+A SFSHMLNL NLAEEVQIA+RRR+KLK Sbjct: 61 EYETKHDL---QKLDELGKMITSLDPGDSIVIAKSFSHMLNLANLAEEVQIAYRRRIKLK 117
Query: 502 KREFGDENSAITESDLEETFRRLVTD 579 K +F DENSAITESD+EET +RLV D Sbjct: 118 KGDFADENSAITESDIEETLKRLVVD 143
>sp|P27154|CAPP_TOBAC Phosphoenolpyruvate carboxylase OS=Nicotiana tabacum GN=PPC PE=2 SV=1 Length = 964
Score = 192 bits (488), Expect = 1e-48 Identities = 95/148 (64%), Positives = 121/148 (81%) Frame = +1
Query: 136 QSLQKMPSMDEHMRKLVPRKVTDDDHLIEYDALLLDRFMDILQDLHGDEMREKVQLCYEL 315 +SL+K+ S+D +R LVP KV++DD L+EYDALLLDRF+DILQDLHG++++E VQ CYEL Sbjct: 4 RSLEKLASIDAQLRALVPGKVSEDDKLVEYDALLLDRFLDILQDLHGEDLKETVQECYEL 63
Query: 316 ASECENAESTDKDKKLEELAEVLKNMDPGDSIVVASSFSHMLNLTNLAEEVQIAFRRRVK 495 ++E E KKLEEL VL ++DPGDSIV+A +FSHMLNL NLAEEVQIA+RRR K Sbjct: 64 SAEYEGKHDP---KKLEELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRQK 120
Query: 496 LKKREFGDENSAITESDLEETFRRLVTD 579 LK+ +F DEN+A TESD+EETF++LV D Sbjct: 121 LKRGDFADENNATTESDIEETFKKLVGD 148
>sp|P51059|CAPP2_MAIZE Phosphoenolpyruvate carboxylase 2 OS=Zea mays GN=PEP4 PE=2 SV=1 Length = 967
Score = 191 bits (484), Expect = 3e-48 Identities = 93/146 (63%), Positives = 120/146 (82%) Frame = +1
Query: 142 LQKMPSMDEHMRKLVPRKVTDDDHLIEYDALLLDRFMDILQDLHGDEMREKVQLCYELAS 321 ++++ S+D +R LVP KV++DD LIEYDALLLDRF+DILQDLHGD+++E VQ CYE+A+ Sbjct: 8 MERLSSIDAQLRMLVPGKVSEDDKLIEYDALLLDRFLDILQDLHGDDLKEMVQECYEVAA 67
Query: 322 ECENAESTDKDKKLEELAEVLKNMDPGDSIVVASSFSHMLNLTNLAEEVQIAFRRRVKLK 501 E E +KL+EL +++ ++DPGDSIV+A S SHMLNL NLAEEVQIA+RRR+KLK Sbjct: 68 EYETKHDL---QKLDELGKMITSLDPGDSIVIAKSLSHMLNLANLAEEVQIAYRRRIKLK 124
Query: 502 KREFGDENSAITESDLEETFRRLVTD 579 K +F DENSAITESD+EET +RLV D Sbjct: 125 KGDFADENSAITESDIEETLKRLVVD 150
>sp|P29196|CAPP_SOLTU Phosphoenolpyruvate carboxylase OS=Solanum tuberosum GN=PPC1 PE=2 SV=2 Length = 965
Score = 189 bits (481), Expect = 7e-48 Identities = 95/149 (63%), Positives = 124/149 (83%), Gaps = 1/149 (0%) Frame = +1
Query: 136 QSLQKMPSMDEHMRKLVPRKVTDDDHLIEYDALLLDRFMDILQDLHGDEMREKVQLCYEL 315 ++L K+ S+D +R+LVP KV++DD L+EYDALLLDRF+DILQDLHG++++E VQ CYEL Sbjct: 4 RNLDKLASIDAQLRQLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLKETVQECYEL 63
Query: 316 ASECENAESTDKDKKLEELAEVLKNMDPGDSIVVASSFSHMLNLTNLAEEVQIAFRRRVK 495 ++E E+ KKLEEL VL ++DPGDSIV+A +FSHMLNL NLAEEVQIA+RRR K Sbjct: 64 SAE---YEAKHDPKKLEELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRQK 120
Query: 496 LKKR-EFGDENSAITESDLEETFRRLVTD 579 LKK+ +FGDE++A TESD+EETF++LV D Sbjct: 121 LKKKGDFGDESNATTESDIEETFKKLVGD 149
>sp|Q9MAH0|CAPP1_ARATH Phosphoenolpyruvate carboxylase 1 OS=Arabidopsis thaliana GN=PPC1 PE=1 SV=1 Length = 967
Score = 187 bits (476), Expect = 2e-47 Identities = 97/149 (65%), Positives = 122/149 (81%), Gaps = 1/149 (0%) Frame = +1
Query: 136 QSLQKMPSMDEHMRKLVPRKVTDDDHLIEYDALLLDRFMDILQDLHGDEMREKVQLCYEL 315 + L+KM S+D H+R+LVP KV++DD L+EYDALLLDRF+DILQDLHG+++RE VQ YE Sbjct: 4 RKLEKMASIDVHLRQLVPGKVSEDDKLVEYDALLLDRFLDILQDLHGEDLRETVQELYEH 63
Query: 316 ASECENAESTDKDKKLEELAEVLKNMDPGDSIVVASSFSHMLNLTNLAEEVQIAFRRRV- 492 ++E E + KKLEEL VL ++DPGDSIV+A +FSHMLNL NLAEEVQIA+RRR+ Sbjct: 64 SAEYEGKH---EPKKLEELGSVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRIK 120
Query: 493 KLKKREFGDENSAITESDLEETFRRLVTD 579 KLKK +F DE+SA TESDLEETF++LV D Sbjct: 121 KLKKGDFVDESSATTESDLEETFKKLVGD 149
>sp|Q01647|CAPP1_FLAPR Phosphoenolpyruvate carboxylase OS=Flaveria pringlei GN=PPCA1 PE=2 SV=1 Length = 967
Score = 187 bits (475), Expect = 3e-47 Identities = 92/146 (63%), Positives = 120/146 (82%) Frame = +1
Query: 136 QSLQKMPSMDEHMRKLVPRKVTDDDHLIEYDALLLDRFMDILQDLHGDEMREKVQLCYEL 315 ++L+K+ S+D +R LVP KV++DD LIEYDALLLD+F+DILQDLHG++++E VQ CYEL Sbjct: 4 RNLEKLASIDAQLRLLVPGKVSEDDKLIEYDALLLDKFLDILQDLHGEDLKEAVQECYEL 63
Query: 316 ASECENAESTDKDKKLEELAEVLKNMDPGDSIVVASSFSHMLNLTNLAEEVQIAFRRRVK 495 ++E E KKLEEL VL ++DPGDSIV+A +FSHMLNL NLAEEVQIA+RRR+K Sbjct: 64 SAEYEGKHDP---KKLEELGSVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRIK 120
Query: 496 LKKREFGDENSAITESDLEETFRRLV 573 LK+ +F DE +A TESD+EETF++LV Sbjct: 121 LKRGDFADEANATTESDIEETFKKLV 146
>sp|P51063|CAPP_PICAB Phosphoenolpyruvate carboxylase OS=Picea abies GN=PPC PE=2 SV=1 Length = 963
Score = 186 bits (473), Expect = 6e-47 Identities = 97/147 (65%), Positives = 116/147 (78%) Frame = +1
Query: 133 RQSLQKMPSMDEHMRKLVPRKVTDDDHLIEYDALLLDRFMDILQDLHGDEMREKVQLCYE 312 R +L+KM S+D MR LVP KV++DD LIEYDALLLDRF+DILQDLHG+++R VQ CYE Sbjct: 3 RNNLEKMASIDAQMRLLVPGKVSEDDKLIEYDALLLDRFLDILQDLHGEDIRAMVQECYE 62
Query: 313 LASECENAESTDKDKKLEELAEVLKNMDPGDSIVVASSFSHMLNLTNLAEEVQIAFRRRV 492 + E E K LEEL VL ++DPGDSIVVASSFSHMLNL NLAEEVQIA+RRR Sbjct: 63 RSGEYEGKNDPHK---LEELGNVLTSLDPGDSIVVASSFSHMLNLANLAEEVQIAYRRRN 119
Query: 493 KLKKREFGDENSAITESDLEETFRRLV 573 K+K+ F DE++A TESD+EETF+RLV Sbjct: 120 KIKRGGFADESNATTESDIEETFKRLV 146
>sp|Q84VW9|CAPP3_ARATH Phosphoenolpyruvate carboxylase 3 OS=Arabidopsis thaliana GN=PPC3 PE=2 SV=2 Length = 968
Score = 184 bits (468), Expect = 2e-46 Identities = 94/149 (63%), Positives = 122/149 (81%), Gaps = 1/149 (0%) Frame = +1
Query: 136 QSLQKMPSMDEHMRKLVPRKVTDDDHLIEYDALLLDRFMDILQDLHGDEMREKVQLCYEL 315 ++++KM S+D +R+LVP KV++DD L+EYDALLLDRF+DILQDLHG+++RE VQ YEL Sbjct: 4 RNIEKMASIDAQLRQLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLRETVQELYEL 63
Query: 316 ASECENAESTDKDKKLEELAEVLKNMDPGDSIVVASSFSHMLNLTNLAEEVQIAFRRRV- 492 ++E E + KLEEL VL ++DPGDSIV++ +FSHMLNL NLAEEVQIA RRR+ Sbjct: 64 SAEYEGKR---EPSKLEELGSVLTSLDPGDSIVISKAFSHMLNLANLAEEVQIAHRRRIK 120
Query: 493 KLKKREFGDENSAITESDLEETFRRLVTD 579 KLKK +F DE+SA TESD+EETF+RLV+D Sbjct: 121 KLKKGDFVDESSATTESDIEETFKRLVSD 149
>sp|Q01648|CAPP1_FLATR Phosphoenolpyruvate carboxylase OS=Flaveria trinervia GN=PPCA1 PE=2 SV=1 Length = 967
Score = 184 bits (467), Expect = 3e-46 Identities = 89/146 (60%), Positives = 119/146 (81%) Frame = +1
Query: 136 QSLQKMPSMDEHMRKLVPRKVTDDDHLIEYDALLLDRFMDILQDLHGDEMREKVQLCYEL 315 ++++K+ S+D +R LVP KV++DD L+EYDALLLD+F+DILQDLHG++++E VQ CYEL Sbjct: 4 RNVEKLASIDAQLRLLVPGKVSEDDKLVEYDALLLDKFLDILQDLHGEDLKEAVQQCYEL 63
Query: 316 ASECENAESTDKDKKLEELAEVLKNMDPGDSIVVASSFSHMLNLTNLAEEVQIAFRRRVK 495 ++E E KKL+EL +L ++DPGDSIV+A +FSHMLNL NLAEEVQIA+RRR+K Sbjct: 64 SAEYEGKHDP---KKLDELGSLLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRIK 120
Query: 496 LKKREFGDENSAITESDLEETFRRLV 573 LK +F DE +A TESD+EETF+RLV Sbjct: 121 LKSGDFADEANATTESDIEETFKRLV 146
>sp|P29193|CAPP1_SACHY Phosphoenolpyruvate carboxylase, housekeeping isozyme OS=Saccharum hybrid PE=3 SV=1 Length = 966
Score = 183 bits (465), Expect = 5e-46 Identities = 92/147 (62%), Positives = 116/147 (78%) Frame = +1
Query: 133 RQSLQKMPSMDEHMRKLVPRKVTDDDHLIEYDALLLDRFMDILQDLHGDEMREKVQLCYE 312 R ++ K S+D +R L P+K++DDD L+EYDALLLDRF+DILQDLHG+++RE VQ CYE Sbjct: 3 RNAVDKATSIDAQLRLLAPQKLSDDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYE 62
Query: 313 LASECENAESTDKDKKLEELAEVLKNMDPGDSIVVASSFSHMLNLTNLAEEVQIAFRRRV 492 LA+E EN K L+E+ VL ++DPGDSIV+ SFSHML L NLAEEVQIA+RRR+ Sbjct: 63 LAAEYENKLDP---KMLDEIGNVLTSLDPGDSIVITKSFSHMLILANLAEEVQIAYRRRI 119
Query: 493 KLKKREFGDENSAITESDLEETFRRLV 573 KLKK +F DENSA TESD+EET +RL+ Sbjct: 120 KLKKGDFVDENSATTESDIEETLKRLM 146
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q93XG8 |
| Definition |
tr|Q93XG8|Q93XG8_HYDVE Phosphoenolpyruvate carboxylase OS=Hydrilla verticillata |
| Align length |
144 |
| Score (bit) |
194.0 |
| E-value |
2.0e-48 |
| Report |
 |