DK953829 |
Clone id |
TST39A01NGRL0018_N03 |
Library |
TST39 |
Length |
617 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_N03. 5' end sequence. |
Accession |
DK953829 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL291Contig1 |
Sequence |
CGATTCATCCAGTCTGCACAGGGATACATGGGTGGAGGAGCAATGATTCGTGGCATGGCA CGATTGATGGGGGTCGCAGCAGCAGGGACTGCTGCAATGGCTCCATCATCTTCTCCAGCT TTCTGCCATGCTTCGACGCAAGAACATTCAGCCAACATGCCATCTGCGCTACATCTGTCT CAGAAGGAGGCTTCTTCTGGAGGTGTCCCTTCTGACATGCGATTCCTCAATGCAGATGAC TTGGAATATTCTTCAGATGAGGATTGGGGCAAACTCTCTTACAATCGCCTTGTATTTTCC ACTGCTCCCTCGGAAGAGGAAGTTGAAGAGGCCACCAAAGAGCTACATGCTGCTCTTCAT CTCTCCATTCCTGCCTCTAGTTCTGTGGAAAAAGAGAGCCCAACCATGCCTGTGGTGGAG AATGAGGAGAAAGAATTTGTTCCGGCCATTGTGAATCAAGAGAGGGCAACAGAGGAACAG CTTCCATCTTTGTCTGCTGGCCTGGGTCTGCTTGCTGCAGGAAGCAGCTCTGTTTATCAA GCATTTCATTTATTGCAGACTAACTCCAAGGTCCAGGATGCAGTCAAATCGCTTGCTCGT GATCCGGCAATCTGGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5TGJ6 |
Definition |
sp|Q5TGJ6|HDGL1_HUMAN Hepatoma-derived growth factor-like protein 1 OS=Homo sapiens |
Align length |
59 |
Score (bit) |
35.0 |
E-value |
0.31 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SL01 |
Definition |
tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
190 |
Score (bit) |
52.8 |
E-value |
2.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953829|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_N03, 5' (617 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella paten... 53 2e-05 tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromos... 52 2e-05 tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea... 50 1e-04 tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea... 46 0.002 tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea m... 45 0.003 tr|Q10QD2|Q10QD2_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 39 0.24 tr|A7P136|A7P136_VITVI Chromosome chr19 scaffold_4, whole genome... 39 0.32 tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subs... 37 0.71 tr|A2YRU6|A2YRU6_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.71 tr|Q6BTR4|Q6BTR4_DEBHA DEHA2C16500p OS=Debaryomyces hansenii GN=... 37 0.93 tr|Q9LRH2|Q9LRH2_RAPSA Vacuolar calcium binding protein OS=Rapha... 36 2.1 tr|B6FZE6|B6FZE6_9CLOT Putative uncharacterized protein OS=Clost... 35 2.7 tr|Q47E23|Q47E23_DECAR Rhs element Vgr protein OS=Dechloromonas ... 35 3.5 tr|Q0SK55|Q0SK55_RHOSR Putative uncharacterized protein OS=Rhodo... 35 3.5 tr|B4DXS8|B4DXS8_HUMAN cDNA FLJ50911, moderately similar to Homo... 35 3.5 tr|Q4P1M0|Q4P1M0_USTMA Putative uncharacterized protein OS=Ustil... 35 3.5 tr|Q01JC7|Q01JC7_ORYSA OSIGBa0122F23.3 protein OS=Oryza sativa G... 35 4.6 tr|A7PKF7|A7PKF7_VITVI Chromosome chr15 scaffold_19, whole genom... 35 4.6 tr|A2XW72|A2XW72_ORYSI Putative uncharacterized protein OS=Oryza... 35 4.6 tr|B8PJ31|B8PJ31_9APHY Predicted protein OS=Postia placenta Mad-... 35 4.6 tr|A8NSH9|A8NSH9_COPC7 Putative uncharacterized protein OS=Copri... 35 4.6 tr|Q1Z792|Q1Z792_PHOPR Putative chemotaxis protein CheA OS=Photo... 34 6.0 tr|Q7XU30|Q7XU30_ORYSJ Os04g0550700 protein OS=Oryza sativa subs... 34 6.0 tr|A9PAV8|A9PAV8_POPTR Putative uncharacterized protein OS=Popul... 34 6.0 tr|A3AW63|A3AW63_ORYSJ Putative uncharacterized protein OS=Oryza... 34 6.0 tr|Q584C3|Q584C3_9TRYP Putative uncharacterized protein OS=Trypa... 34 6.0 tr|B4QLI9|B4QLI9_DROSI GD13015 OS=Drosophila simulans GN=GD13015... 34 6.0 tr|B4AEW4|B4AEW4_BACPU Glutamate-5-semialdehyde dehydrogenase OS... 34 7.8 tr|Q9FKH0|Q9FKH0_ARATH Genomic DNA, chromosome 5, TAC clone:K11J... 34 7.8 tr|Q69MX4|Q69MX4_ORYSJ Os09g0407800 protein OS=Oryza sativa subs... 34 7.8
>tr|A9SL01|A9SL01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_229919 PE=4 SV=1 Length = 375
Score = 52.8 bits (125), Expect = 2e-05 Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 26/190 (13%) Frame = +1
Query: 124 CHASTQEHSANMPSALHLS---QKEASSGGVPSDMRF---LNADDLEYSSDEDWGKLSYN 285 C T S P++ ++ E S G +D F L+ +D E++ DED+ Sbjct: 23 CRMCTTTPSLKAPTSARITCDCPSEVHSPGSTTDSGFKQYLDIEDWEFAGDEDY------ 76
Query: 286 RLVFSTAPSEEEVEEATKELHAALHLSI---------------PASSSVEKESPTM--PV 414 LVF T P++ EVEEAT +L AL + + SS EK+ P Sbjct: 77 -LVFGTLPTQGEVEEATSDLQHALQIGLFTNRSSNPLESSLARAGSSGKEKDGAVSRDPK 135
Query: 415 VENEEKEF--VPAIVNQERATEEQL-PXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAV 585 V+ E+ + V A+ + L + +AFH Q N ++Q V Sbjct: 136 VDGEDAGYHVVDAVADDWLEPSVALASSSKGKEVAGSGGKSAMLEAFHQFQHNPQIQQMV 195
Query: 586 KSLARDPAIW 615 SLA D +W Sbjct: 196 VSLATDKGVW 205
>tr|Q9FIV0|Q9FIV0_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRB17 (AT5g54540/MRB17_4) OS=Arabidopsis thaliana GN=At5g54540 PE=2 SV=1 Length = 297
Score = 52.4 bits (124), Expect = 2e-05 Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 3/165 (1%) Frame = +1
Query: 130 ASTQEHSANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYNRLVFSTAP 309 AS++ SA++ SA+H S +E G + M+ DD E++ +E R+VFS P Sbjct: 44 ASSKPVSASITSAVHPSVEE--DGMI---MQRPVWDDWEFAEEEP-----IPRVVFSKPP 93
Query: 310 SEEEVEEATKELHAALHL---SIPASSSVEKESPTMPVVENEEKEFVPAIVNQERATEEQ 480 S EE +EAT++L A++L S P SS+ + S V F ++ RA E Sbjct: 94 SLEEAKEATEDLKEAINLVYMSSPKSSAAMEGSNDGGSVSKMLSGFQS---SENRAVESA 150
Query: 481 LPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIW 615 +P QAF L N+ Q V S+A DP +W Sbjct: 151 VP-------------QVALQAFAFLSENTAAQTVVASIASDPKVW 182
>tr|A9NLD3|A9NLD3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 314
Score = 50.1 bits (118), Expect = 1e-04 Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 9/136 (6%) Frame = +1
Query: 235 DDLEYSSDEDWGKLSYN-----RLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKE 396 DD E++ DE+ + Y+ RL+F + P+++EV+E + AL I P S + + Sbjct: 75 DDWEFTGDEEGFQRHYDDDHHDRLIFGSVPTQKEVQEVVSDFQDALTQGIVPVSGNFNDK 134
Query: 397 ---SPTMPVVENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNS 567 S + V + + +VN ++ E V +AF+LLQ+N Sbjct: 135 TTLSSSSSVYKKSGNKSCGTLVNLDQMERES--HEDNYRIVQKAGHNNVCEAFNLLQSNP 192
Query: 568 KVQDAVKSLARDPAIW 615 VQ+ V SLA D +W Sbjct: 193 AVQEMVISLASDKTVW 208
>tr|A9NN66|A9NN66_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 319
Score = 45.8 bits (107), Expect = 0.002 Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 11/135 (8%) Frame = +1
Query: 244 EYSSDEDWGKLSY-NRLVFSTAPSEEEVEEATKELHAALHLSI-PASSSVEKESPTMPVV 417 E ++++++G + +R+VF AP++EEVEEA +L +L SI S S ES ++P Sbjct: 86 EETNNDNFGHHPFRDRVVFGAAPTKEEVEEAVSDLQGSLAQSILYPSGSQGYESSSLPTA 145
Query: 418 ENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQ---------AFHLLQTNSK 570 + + + +E V Q AF LLQ N Sbjct: 146 VQKNGGSIEVSQCSDSESESSKSVVDWIEPELYLYNHEVVQQLRQNDVLDAFRLLQRNHT 205
Query: 571 VQDAVKSLARDPAIW 615 V++ V SL D AIW Sbjct: 206 VREMVISLVSDKAIW 220
>tr|B6TN01|B6TN01_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 315
Score = 45.4 bits (106), Expect = 0.003 Identities = 39/110 (35%), Positives = 53/110 (48%) Frame = +1
Query: 286 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 465 RLVF+ PS EE EEAT EL A+ + S VE VV+ + KEF + Sbjct: 101 RLVFAP-PSREEAEEATTELRDAIGRAYFNESPVE-------VVKEQNKEF------NKL 146
Query: 466 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIW 615 AT+ +P V QAF LL+++++ Q V SLA D +W Sbjct: 147 ATDAIIPSMPGH----------VVQAFTLLKSSTEAQSVVASLASDRNVW 186
>tr|Q10QD2|Q10QD2_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g10390 PE=4 SV=1 Length = 288
Score = 38.9 bits (89), Expect = 0.24 Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 4/127 (3%) Frame = +1
Query: 247 YSSDEDWGKLSYNRLVFSTAPSEEEVEEATKELHAALHLSIPAS----SSVEKESPTMPV 414 Y++ +DW + +R VF P+ EE AT +L + + A S + + PT + Sbjct: 52 YAAIDDW--VIPDREVFGPVPTHEEAMAATLDLKESFQFAKSAQLEPLPSGDLDVPTKGL 109
Query: 415 VENEEKEFVPAIVNQERATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSL 594 V +E + + E ++ V QAF +LQ + + Q+ V SL Sbjct: 110 VHSESSQGLIHSKTSEHEDNHEISLVSSGAPGR------VVQAFTMLQDSPEAQEVVASL 163
Query: 595 ARDPAIW 615 A D +W Sbjct: 164 ASDQNVW 170
>tr|A7P136|A7P136_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027469001 PE=4 SV=1 Length = 209
Score = 38.5 bits (88), Expect = 0.32 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 7/162 (4%) Frame = +1
Query: 151 ANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYN----RLVFSTAPSEE 318 A +P + +S + V DD E++S E+ + R+VF P+ + Sbjct: 8 ATVPVSSVISSAKLGDAPVSVQRPSWELDDWEFASVEEEINIGTGEPLPRVVFGGVPTLQ 67
Query: 319 EVEEATKELHAAL-HLSIPASSSVEKESPTMPVVE--NEEKEFVPAIVNQERATEEQLPX 489 E +EAT EL AL L + S S+ + +++ N + A V T +P Sbjct: 68 EAKEATSELKDALDQLYLSPSRSIRSGVQQLGLLQIANSDHLETKACVATTENTVATVPA 127
Query: 490 XXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIW 615 QAF L+ + Q+ V S+A DP +W Sbjct: 128 H-------------AIQAFAYLKDSPAAQNVVASIASDPNVW 156
>tr|Q6Z9U8|Q6Z9U8_ORYSJ Os08g0179900 protein OS=Oryza sativa subsp. japonica GN=P0455A11.10 PE=4 SV=1 Length = 300
Score = 37.4 bits (85), Expect = 0.71 Identities = 33/110 (30%), Positives = 50/110 (45%) Frame = +1
Query: 286 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 465 RLVF+ PS EE EEAT EL A+ + + +E VV+ ++K+ + Sbjct: 104 RLVFAP-PSREEAEEATTELRDAIDRVYFSEAPIE-------VVKEQDKDL------SKL 149
Query: 466 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIW 615 + +P V QAF LL+++ + Q V SLA D +W Sbjct: 150 GADAIIPAMPGH----------VMQAFTLLKSSPEAQGVVASLASDKNVW 189
>tr|A2YRU6|A2YRU6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28043 PE=4 SV=1 Length = 240
Score = 37.4 bits (85), Expect = 0.71 Identities = 33/110 (30%), Positives = 50/110 (45%) Frame = +1
Query: 286 RLVFSTAPSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAIVNQER 465 RLVF+ PS EE EEAT EL A+ + + +E VV+ ++K+ + Sbjct: 44 RLVFAP-PSREEAEEATTELRDAIDRVYFSEAPIE-------VVKEQDKDL------SKL 89
Query: 466 ATEEQLPXXXXXXXXXXXXXXXVYQAFHLLQTNSKVQDAVKSLARDPAIW 615 + +P V QAF LL+++ + Q V SLA D +W Sbjct: 90 GADAIIPAMPGH----------VMQAFTLLKSSPEAQGVVASLASDKNVW 129
>tr|Q6BTR4|Q6BTR4_DEBHA DEHA2C16500p OS=Debaryomyces hansenii GN=DEHA2C16500g PE=4 SV=2 Length = 309
Score = 37.0 bits (84), Expect = 0.93 Identities = 30/109 (27%), Positives = 48/109 (44%) Frame = +1
Query: 124 CHASTQEHSANMPSALHLSQKEASSGGVPSDMRFLNADDLEYSSDEDWGKLSYNRLVFST 303 C + HS PS L QK+ SS +++ Y++ +D + Y Sbjct: 168 CQVTPISHSLLSPSLLSQVQKQKSS------------ENISYTNLQDLSSIDY------Y 209
Query: 304 APSEEEVEEATKELHAALHLSIPASSSVEKESPTMPVVENEEKEFVPAI 450 P+E+E E K L +LS P S K +PT P + NE ++ + +I Sbjct: 210 PPTEQEWETEHKRLW--FNLSKPLKKSFRKPTPTTP-INNENQKLIDSI 255
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