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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953844
Clone id TST39A01NGRL0018_N19
Library
Length 572
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_N19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGCGTGCTGCTCCGAGCTACTCCGACACAACCAAAAAGCCAGAAAGAGGAGGGCGAGAGA
TGGTGGCAGCAGTAGCCCAACGTGTTGCATCGACAGCGATGAAGGAACCGCTGGGCCTTA
GTCCTAACTCTTCCCTGGGCTTCACATGCAGCGGCCTCTCCGGCCACAGACTTTTCCGTG
CTGCCCAGAATGTTAGCCGCATCCATTGCGCGACAGCCGCCGTTGTGCCCAAGAAGAAGG
ATAACCTTCTGGCTGTTGCCGAACAACACTTCCTTCGTGCCACTGAAAACCCCCTGGAGG
GCCTCTCCTTTTCTATGGAAGAGTTCTCCCAAGCTCTTTCCAAGTATGACTTCAACTTCG
AGATCGGACAGACGGTTAAAGGAACTGTTTTTTTGGCCAACAACAATGGGGCCTTGGTTG
ATATTGGAGCTAAAGCTCCTGCATTTTTACCTACAAGCGAGGCCTCAATTCTGAGAATAA
AGCATGTAGAAGAAGTAGGGCTTTTCCCGGGACTAGAAGATGATTTTTATGTCATGAAAT
CTGATGATGACCACGGGACGGATGGTGCTGAG
■■Homology search results ■■ -
sp_hit_id P29344
Definition sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea
Align length 163
Score (bit) 105.0
E-value 1.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953844|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_N19, 5'
         (572 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic OS=S...   105   1e-22
sp|P46228|RS1_SYNP6 30S ribosomal protein S1 OS=Synechococcus sp...    74   4e-13
sp|P73530|RS1A_SYNY3 30S ribosomal protein S1 homolog A OS=Synec...    73   1e-12
sp|P74142|RS1B_SYNY3 30S ribosomal protein S1 homolog B OS=Synec...    59   1e-08
sp|O33698|RS1_SYNE7 30S ribosomal protein S1 OS=Synechococcus el...    50   1e-05
sp|P51345|RR1_PORPU 30S ribosomal protein S1, chloroplastic OS=P...    50   1e-05
sp|Q1XDE2|RR1_PORYE 30S ribosomal protein S1, chloroplastic OS=P...    48   4e-05
sp|O06147|RS1_MYCTU 30S ribosomal protein S1 OS=Mycobacterium tu...    37   0.053
sp|P46836|RS1_MYCLE 30S ribosomal protein S1 OS=Mycobacterium le...    37   0.053
sp|Q9Z8M3|RS1_CHLPN 30S ribosomal protein S1 OS=Chlamydia pneumo...    35   0.20 
sp|Q83E09|RS1_COXBU 30S ribosomal protein S1 OS=Coxiella burneti...    35   0.35 
sp|A5VVL2|DAP_BRUO2 D-aminopeptidase OS=Brucella ovis (strain AT...    34   0.45 
sp|A6WYS5|DAP_OCHA4 D-aminopeptidase OS=Ochrobactrum anthropi (s...    34   0.59 
sp|O84100|RS1_CHLTR 30S ribosomal protein S1 OS=Chlamydia tracho...    33   0.77 
sp|P38016|RS1_CHLMU 30S ribosomal protein S1 OS=Chlamydia murida...    33   0.77 
sp|Q1MPL7|PNP_LAWIP Polyribonucleotide nucleotidyltransferase OS...    33   0.77 
sp|Q8FV99|DAP_BRUSU D-aminopeptidase OS=Brucella suis GN=dap PE=...    33   0.77 
sp|A9WVV8|DAP_BRUSI D-aminopeptidase OS=Brucella suis (strain AT...    33   0.77 
sp|Q8YD27|DAP_BRUME D-aminopeptidase OS=Brucella melitensis GN=d...    33   0.77 
sp|A9MCM7|DAP_BRUC2 D-aminopeptidase OS=Brucella canis (strain A...    33   0.77 
sp|Q579G4|DAP_BRUAB D-aminopeptidase OS=Brucella abortus GN=dap ...    33   0.77 
sp|Q2YLB4|DAP_BRUA2 D-aminopeptidase OS=Brucella abortus (strain...    33   0.77 
sp|A9F8Z2|PNP_SORC5 Polyribonucleotide nucleotidyltransferase OS...    33   1.3  
sp|Q57641|Y182_METJA Uncharacterized protein MJ0182 OS=Methanoca...    32   1.7  
sp|P50889|RS1_LEULA 40S ribosomal protein S1 OS=Leuconostoc lact...    32   1.7  
sp|Q5F267|P5I13_MOUSE Tumor protein p53-inducible protein 13 OS=...    32   1.7  
sp|Q9JZ44|RS1_NEIMB 30S ribosomal protein S1 OS=Neisseria mening...    32   2.2  
sp|Q9H6F5|CCD86_HUMAN Coiled-coil domain-containing protein 86 O...    32   2.2  
sp|Q8HXL3|WDR62_PIG WD repeat-containing protein 62 OS=Sus scrof...    32   2.9  
sp|Q07V29|MUTS_RHOP5 DNA mismatch repair protein mutS OS=Rhodops...    32   2.9  

>sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic
           OS=Spinacia oleracea GN=RPS1 PE=1 SV=1
          Length = 411

 Score =  105 bits (263), Expect = 1e-22
 Identities = 65/163 (39%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
 Frame = +3

Query: 63  VAAVAQRVASTAMKEPLGLSPNSSLGFTCSGLSGHRLF-RAAQNVSRIHCATAAVVPKKK 239
           +A++AQ++A      PL    NS+L    S    H L  R +  VS +  + A    +++
Sbjct: 1   MASLAQQLAGGLRCPPLS---NSNLSKPFS--PKHTLKPRFSPIVSAVAVSNAQT--RER 53

Query: 240 DNLLAVAEQHFLRATENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALV 419
             L  + E  + R    P+EG+SF++++F  AL KYDFN E+G  VKGTVF  + NGALV
Sbjct: 54  QKLKQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALV 113

Query: 420 DIGAKAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVMKSDD 548
           DI AK+ A+LP +EA I RIK+VEE G+ PG+ ++F ++  ++
Sbjct: 114 DITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENE 156


>sp|P46228|RS1_SYNP6 30S ribosomal protein S1 OS=Synechococcus sp.
           (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpsA
           PE=1 SV=4
          Length = 307

 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 38/89 (42%), Positives = 55/89 (61%)
 Frame = +3

Query: 291 PLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASI 470
           P   + F+ E+F+  L +YD++F  G TV GTVF     GAL+DIGAK  AFLP  E SI
Sbjct: 7   PAVDIGFTHEDFAALLDQYDYHFNPGDTVVGTVFNLEPRGALIDIGAKTAAFLPVQEMSI 66

Query: 471 LRIKHVEEVGLFPGLEDDFYVMKSDDDHG 557
            R++  EEV L P    +F+++  +++ G
Sbjct: 67  NRVESPEEV-LQPSEMREFFILSDENEDG 94


>sp|P73530|RS1A_SYNY3 30S ribosomal protein S1 homolog A
           OS=Synechocystis sp. (strain PCC 6803) GN=rps1A PE=3
           SV=1
          Length = 328

 Score = 72.8 bits (177), Expect = 1e-12
 Identities = 35/85 (41%), Positives = 54/85 (63%)
 Frame = +3

Query: 303 LSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIK 482
           + F++E+F+  L KYD++F  G  V GTVF   + GAL+DIGAK  A++P  E SI R+ 
Sbjct: 10  IGFTLEDFAALLDKYDYHFSPGDIVAGTVFSMESRGALIDIGAKTAAYIPIQEMSINRVD 69

Query: 483 HVEEVGLFPGLEDDFYVMKSDDDHG 557
             EEV L P    +F+++  +++ G
Sbjct: 70  DPEEV-LQPNETREFFILTDENEDG 93


>sp|P74142|RS1B_SYNY3 30S ribosomal protein S1 homolog B
           OS=Synechocystis sp. (strain PCC 6803) GN=rps1b PE=3
           SV=1
          Length = 305

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
 Frame = +3

Query: 306 SFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKH 485
           +FS++EF++AL K+D++ E GQTV G +    N G  VD G K+P F+P  E  +    H
Sbjct: 9   AFSLDEFAKALDKHDYHAEKGQTVHGKICQHANEGVYVDFGGKSPGFVPVQELGLR--PH 66

Query: 486 VEEVGLFPGLED--DFYVMKSDDDHG 557
            E    FP L+   DF V    +D G
Sbjct: 67  AEIEDSFP-LDSAWDFLVTSEQNDEG 91


>sp|O33698|RS1_SYNE7 30S ribosomal protein S1 OS=Synechococcus
           elongatus (strain PCC 7942) GN=rpsA PE=3 SV=1
          Length = 295

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 29/82 (35%), Positives = 47/82 (57%)
 Frame = +3

Query: 312 SMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKHVE 491
           S ++F+ AL     + + GQ V+G V   + +GA +DIG KAPAFLP  EA++  +  + 
Sbjct: 10  SYDDFALALEAQSLDSQKGQLVRGKVCEYSTDGAYIDIGGKAPAFLPKREAALHAVLDL- 68

Query: 492 EVGLFPGLEDDFYVMKSDDDHG 557
           E  L    E +F V++  ++ G
Sbjct: 69  EAHLPKDEELEFLVIRDQNEDG 90


>sp|P51345|RR1_PORPU 30S ribosomal protein S1, chloroplastic
           OS=Porphyra purpurea GN=rps1 PE=3 SV=1
          Length = 263

 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 23/54 (42%), Positives = 30/54 (55%)
 Frame = +3

Query: 306 SFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEAS 467
           SF+   F+  L KY ++  +G  V GT+F    NG LVDIG    A+LP  E S
Sbjct: 7   SFTHRNFAAVLQKYKYDLNLGDIVAGTIFSFELNGVLVDIGTPVSAYLPIQEVS 60


>sp|Q1XDE2|RR1_PORYE 30S ribosomal protein S1, chloroplastic
           OS=Porphyra yezoensis GN=rps1 PE=3 SV=2
          Length = 263

 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 22/53 (41%), Positives = 29/53 (54%)
 Frame = +3

Query: 309 FSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEAS 467
           F+   F+  L KY ++  +G  V GT+F    NG LVDIG    A+LP  E S
Sbjct: 8   FTHRNFAAVLQKYKYDLNLGDIVAGTIFSFELNGVLVDIGTPISAYLPIQEVS 60


>sp|O06147|RS1_MYCTU 30S ribosomal protein S1 OS=Mycobacterium
           tuberculosis GN=rpsA PE=3 SV=1
          Length = 481

 Score = 37.4 bits (85), Expect = 0.053
 Identities = 26/82 (31%), Positives = 38/82 (46%)
 Frame = +3

Query: 312 SMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKHVE 491
           S E+F  A+ K    F  G  V+GT+   + +  L+DIG K    +P  E SI       
Sbjct: 18  SSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVIPARELSIKHDVDPN 77

Query: 492 EVGLFPGLEDDFYVMKSDDDHG 557
           EV +  G E +  V+  +D  G
Sbjct: 78  EV-VSVGDEVEALVLTKEDKEG 98



 Score = 31.2 bits (69), Expect = 3.8
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
 Frame = +3

Query: 261 EQHFLRATENPLEG---LSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGA 431
           E   L  T+   EG   LS    ++ +A    +   E  + VKGTV      G ++DIG 
Sbjct: 85  EVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGTVIEVVKGGLILDIGL 144

Query: 432 KAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVMKSD 545
           +   FLP   AS++ ++ V ++  + G E +  +++ D
Sbjct: 145 R--GFLP---ASLVEMRRVRDLQPYIGKEIEAKIIELD 177


>sp|P46836|RS1_MYCLE 30S ribosomal protein S1 OS=Mycobacterium
           leprae GN=rpsA PE=3 SV=2
          Length = 481

 Score = 37.4 bits (85), Expect = 0.053
 Identities = 26/82 (31%), Positives = 38/82 (46%)
 Frame = +3

Query: 312 SMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKHVE 491
           S E+F  A+ K    F  G  V+GT+   + +  L+DIG K    +P  E SI       
Sbjct: 18  SSEDFLAAIDKTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVIPARELSIKHDVDPN 77

Query: 492 EVGLFPGLEDDFYVMKSDDDHG 557
           EV +  G E +  V+  +D  G
Sbjct: 78  EV-VSVGDEVEALVLTKEDKEG 98


>sp|Q9Z8M3|RS1_CHLPN 30S ribosomal protein S1 OS=Chlamydia
           pneumoniae GN=rpsA PE=3 SV=1
          Length = 580

 Score = 35.4 bits (80), Expect = 0.20
 Identities = 24/85 (28%), Positives = 42/85 (49%)
 Frame = +3

Query: 303 LSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIK 482
           L ++    + +  + D   + G  +KGTV   N +  +VD+G K+   +P SE     I 
Sbjct: 31  LLYTAHRITSSEEESDNEIQPGAILKGTVVDINKDFVVVDVGLKSEGVIPMSEF----ID 86

Query: 483 HVEEVGLFPGLEDDFYVMKSDDDHG 557
             E  GL  G E + Y+ +++D+ G
Sbjct: 87  SSE--GLVLGAEVEVYLDQAEDEEG 109



 Score = 30.8 bits (68), Expect = 5.0
 Identities = 20/60 (33%), Positives = 33/60 (55%)
 Frame = +3

Query: 360 EIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVMK 539
           E G  VKG +      G +VDIG +  AFLP S+    +IK++++   + G   +F ++K
Sbjct: 132 EEGSIVKGQITRKVKGGLIVDIGME--AFLPGSQIDNKKIKNLDD---YVGKVCEFKILK 186
tr_hit_id A9S0R6
Definition tr|A9S0R6|A9S0R6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 162
Score (bit) 154.0
E-value 4.0e-36
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953844|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0018_N19, 5'
         (572 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S0R6|A9S0R6_PHYPA Predicted protein OS=Physcomitrella paten...   154   4e-36
tr|A9RWH7|A9RWH7_PHYPA Predicted protein OS=Physcomitrella paten...   148   2e-34
tr|A9PE95|A9PE95_POPTR Putative uncharacterized protein OS=Popul...   112   1e-23
tr|A7Q8U9|A7Q8U9_VITVI Chromosome chr5 scaffold_64, whole genome...   106   8e-22
tr|A9NYG1|A9NYG1_PICSI Putative uncharacterized protein OS=Picea...   105   2e-21
tr|Q93VC7|Q93VC7_ARATH Putative uncharacterized protein (Putativ...   102   2e-20
tr|B7FJ43|B7FJ43_MEDTR Putative uncharacterized protein OS=Medic...    94   7e-18
tr|Q7V5A4|Q7V5A4_PROMM 30S ribosomal protein S1, homolog A OS=Pr...    90   1e-16
tr|A2CBU1|A2CBU1_PROM3 30S ribosomal protein S1, protein A OS=Pr...    90   1e-16
tr|B4FUZ5|B4FUZ5_MAIZE 30S ribosomal protein S1 OS=Zea mays PE=2...    89   1e-16
tr|Q10MB3|Q10MB3_ORYSJ 30S ribosomal protein S1, chloroplast, pu...    89   2e-16
tr|Q10MB2|Q10MB2_ORYSJ 30S ribosomal protein S1, chloroplast, pu...    89   2e-16
tr|A2XG06|A2XG06_ORYSI Putative uncharacterized protein OS=Oryza...    89   2e-16
tr|Q0DSD6|Q0DSD6_ORYSJ Os03g0315800 protein (Fragment) OS=Oryza ...    88   3e-16
tr|Q05Z68|Q05Z68_9SYNE 30S ribosomal protein S1 OS=Synechococcus...    88   4e-16
tr|Q3AWE8|Q3AWE8_SYNS9 SSU ribosomal protein S1P OS=Synechococcu...    86   1e-15
tr|B5IPJ0|B5IPJ0_9CHRO Ribosomal protein S1 OS=Cyanobium sp. PCC...    86   1e-15
tr|Q05Q21|Q05Q21_9SYNE 30S ribosomal protein S1 OS=Synechococcus...    86   2e-15
tr|A3YUT0|A3YUT0_9SYNE 30S ribosomal protein S1 OS=Synechococcus...    85   2e-15
tr|B1X539|B1X539_PAUCH 30S ribosomal protein S1 OS=Paulinella ch...    85   2e-15
tr|A3Z943|A3Z943_9SYNE RNA binding S1 OS=Synechococcus sp. RS991...    85   3e-15
tr|Q31CL6|Q31CL6_PROM9 SSU ribosomal protein S1P OS=Prochlorococ...    84   4e-15
tr|A5GJ26|A5GJ26_SYNPW 30S ribosomal protein S1 OS=Synechococcus...    84   7e-15
tr|A4CSD5|A4CSD5_SYNPV 30S ribosomal protein S1 OS=Synechococcus...    84   7e-15
tr|Q3AME0|Q3AME0_SYNSC RNA binding S1 OS=Synechococcus sp. (stra...    83   9e-15
tr|A9BDW8|A9BDW8_PROM4 30S ribosomal protein S1-like protein A O...    83   1e-14
tr|A2C0F6|A2C0F6_PROM1 30S ribosomal protein S1, protein A OS=Pr...    83   1e-14
tr|Q46H55|Q46H55_PROMT SSU ribosomal protein S1P OS=Prochlorococ...    82   2e-14
tr|Q7U4S8|Q7U4S8_SYNPX 30S ribosomal protein S1, homolog A OS=Sy...    82   2e-14
tr|Q1PKI2|Q1PKI2_PROMA 30S ribosomal protein S1 A OS=uncultured ...    81   4e-14

>tr|A9S0R6|A9S0R6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_122522 PE=4 SV=1
          Length = 389

 Score =  154 bits (388), Expect = 4e-36
 Identities = 81/162 (50%), Positives = 112/162 (69%), Gaps = 1/162 (0%)
 Frame = +3

Query: 75  AQRVASTAMKEPLGLSPNSSLGFTCSGLSGHRL-FRAAQNVSRIHCATAAVVPKKKDNLL 251
           AQ VA+ A+   LG S    L  + S L+G +L  + A N SR+ C TA  +PK +  LL
Sbjct: 7   AQSVAAGAL---LGSSKGFGLASSSSRLAGAQLGVKGASNGSRVTCRTAFTIPKSRQGLL 63

Query: 252 AVAEQHFLRATENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGA 431
              E+ +  A E+PL G+ F+ EEF++ LSKYDF+FEIG  VKG VF ++ NGAL+DIGA
Sbjct: 64  EEVERRWEAALESPLAGVEFTHEEFAEVLSKYDFSFEIGDMVKGVVFKSDYNGALIDIGA 123

Query: 432 KAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVMKSDDDHG 557
           KAPA+LP +EA I +++ VEEVGL+PG E++F ++K DDD+G
Sbjct: 124 KAPAYLPMAEACIHKLRSVEEVGLYPGTEEEFVIVKDDDDNG 165



 Score = 33.5 bits (75), Expect = 8.6
 Identities = 26/67 (38%), Positives = 31/67 (46%)
 Frame = +3

Query: 357 FEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVM 536
           F IG  V GTV      GA +DIG      L  S+ S  R+  VE V L PG +    V+
Sbjct: 267 FGIGSVVVGTVQTVKPYGAFIDIGG-VSGLLHISQISHDRLTSVETV-LSPGDKLKVMVL 324

Query: 537 KSDDDHG 557
             D D G
Sbjct: 325 SQDKDRG 331


>tr|A9RWH7|A9RWH7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_120257 PE=4 SV=1
          Length = 397

 Score =  148 bits (373), Expect = 2e-34
 Identities = 80/166 (48%), Positives = 107/166 (64%), Gaps = 1/166 (0%)
 Frame = +3

Query: 63  VAAVAQRVASTAMKEPLGLS-PNSSLGFTCSGLSGHRLFRAAQNVSRIHCATAAVVPKKK 239
           +AA AQ VA+ A+    G    NS       G+ G        N SR+ C T   +PK +
Sbjct: 1   MAAAAQTVAAGALLGSQGFGLANSRFAGAQFGVKG------VSNGSRLSCRTTYTIPKSR 54

Query: 240 DNLLAVAEQHFLRATENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALV 419
             LL  AE+ +  A E+PL G+ F+ +EF+ ALSKYDF+FEIG  VKG VF ++ NGAL+
Sbjct: 55  QGLLEEAEKRWEAALESPLAGVQFTNDEFADALSKYDFSFEIGDMVKGVVFKSDYNGALI 114

Query: 420 DIGAKAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVMKSDDDHG 557
           DIGAKAPA+LP  EA I +++ VEEVGL+PG E++F V+K DDD+G
Sbjct: 115 DIGAKAPAYLPMGEACIHKLRSVEEVGLYPGTEEEFVVIKDDDDNG 160


>tr|A9PE95|A9PE95_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 421

 Score =  112 bits (281), Expect = 1e-23
 Identities = 62/148 (41%), Positives = 88/148 (59%), Gaps = 11/148 (7%)
 Frame = +3

Query: 138 GFTCSGLSGHRLFRAAQNVSRIHCATAAVVP-----------KKKDNLLAVAEQHFLRAT 284
           G  C  +S  RL   A   S+   A   VV            K+++ L  + E+ + R  
Sbjct: 10  GLRCPPISISRLTERAATFSKPKRAANFVVTAKAVAISNAQTKEREKLKQLFEEAYERCR 69

Query: 285 ENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEA 464
             P+EG+SF++E+F  AL  YDFN EIG  VKGTVF+ +NNGALVDI AK+ A+LP  EA
Sbjct: 70  TAPMEGVSFTVEDFHSALDAYDFNSEIGTRVKGTVFMTDNNGALVDITAKSSAYLPVQEA 129

Query: 465 SILRIKHVEEVGLFPGLEDDFYVMKSDD 548
           SI RIK +EE G+ PG+ ++F ++  ++
Sbjct: 130 SIHRIKRLEEAGIVPGMREEFVIIGENE 157


>tr|A7Q8U9|A7Q8U9_VITVI Chromosome chr5 scaffold_64, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00033192001
           PE=4 SV=1
          Length = 410

 Score =  106 bits (265), Expect = 8e-22
 Identities = 60/146 (41%), Positives = 84/146 (57%), Gaps = 9/146 (6%)
 Frame = +3

Query: 138 GFTCSGLSGHRLFRA-----AQNVSRIHCATAAVVP----KKKDNLLAVAEQHFLRATEN 290
           G  C  +S  RL +       Q  S +   +A  +     K++  L  + E  + R    
Sbjct: 10  GLRCPPISSSRLSKPFSPKQPQKPSFVRIVSAVAISNAQTKERLKLKEMFEDAYERCRTA 69

Query: 291 PLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASI 470
           P EG+SFS ++F  AL KYDFN EIG  VKGTVF  + NGALVDI AK+ A+LP  EA I
Sbjct: 70  PTEGVSFSADDFYSALDKYDFNSEIGTKVKGTVFCTDTNGALVDITAKSSAYLPVYEACI 129

Query: 471 LRIKHVEEVGLFPGLEDDFYVMKSDD 548
            +IKHVEE G+ PG+ ++F ++  ++
Sbjct: 130 HKIKHVEEAGIVPGVREEFVIIGENE 155


>tr|A9NYG1|A9NYG1_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 425

 Score =  105 bits (261), Expect = 2e-21
 Identities = 51/107 (47%), Positives = 74/107 (69%), Gaps = 1/107 (0%)
 Frame = +3

Query: 231 KKKDNLLAVAEQHFLRATENPLEGLSFSMEEFSQALSKYD-FNFEIGQTVKGTVFLANNN 407
           +++++L+   E+   +  ENP+EG+ F +E+FS++L+  D  N EIG TVKG VF  + N
Sbjct: 66  RERESLMEEIEERLRKIRENPMEGVPFDLEQFSESLANNDGVNCEIGSTVKGMVFKTDAN 125

Query: 408 GALVDIGAKAPAFLPTSEASILRIKHVEEVGLFPGLEDDFYVMKSDD 548
           GA+VDI  K PAFLP  EA I  IK  EE+GL+PG+E+ F V++ DD
Sbjct: 126 GAMVDIRDKVPAFLPLVEACIYNIKTPEEIGLYPGIEEHFMVLREDD 172


>tr|Q93VC7|Q93VC7_ARATH Putative uncharacterized protein (Putative
           ribosomal protein S1) OS=Arabidopsis thaliana
           GN=At5g29771 PE=2 SV=1
          Length = 416

 Score =  102 bits (254), Expect = 2e-20
 Identities = 66/153 (43%), Positives = 92/153 (60%), Gaps = 16/153 (10%)
 Frame = +3

Query: 138 GFTCSGLSGH-RLFRAA-----QNVSRIHCAT--AAVV-----PKKKDNLLAVAEQHFLR 278
           G  CS LS   RL R A     QN S     T  AAV       K++  L  + E  + R
Sbjct: 10  GLRCSPLSSSSRLSRRASKNFPQNKSASVSPTIVAAVAMSSGQTKERLELKKMFEDAYER 69

Query: 279 ATENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTS 458
              +P+EG++F++++F+ A+ +YDFN EIG  VKGTVF  + NGALVDI AK+ A+L   
Sbjct: 70  CRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDISAKSSAYLSVE 129

Query: 459 EASILRIKHVEEVGLFPGLEDDFYVM---KSDD 548
           +A I RIKHVEE G+ PG+ ++F ++   +SDD
Sbjct: 130 QACIHRIKHVEEAGIVPGMVEEFVIIGENESDD 162


>tr|B7FJ43|B7FJ43_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 186

 Score = 93.6 bits (231), Expect = 7e-18
 Identities = 39/85 (45%), Positives = 65/85 (76%)
 Frame = +3

Query: 294 LEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASIL 473
           +EG+SF++++F++ L KYD+  EIG  VKGTVF    +GA VDI +K+ A+LP  EAS+ 
Sbjct: 1   MEGVSFTLDQFTETLEKYDYESEIGTKVKGTVFGTETSGAFVDITSKSTAYLPLYEASLY 60

Query: 474 RIKHVEEVGLFPGLEDDFYVMKSDD 548
           +++HVEE G+FPG++++F ++  ++
Sbjct: 61  KLRHVEEAGIFPGVKEEFVIVGQNE 85


>tr|Q7V5A4|Q7V5A4_PROMM 30S ribosomal protein S1, homolog A
           OS=Prochlorococcus marinus (strain MIT 9313) GN=rps1a/
           rpsA1 PE=4 SV=1
          Length = 367

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 42/94 (44%), Positives = 63/94 (67%)
 Frame = +3

Query: 276 RATENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPT 455
           RA +N L G  F+++EF+  LSKYD+NF+ G  V GTVF   + GA++DIGAK  AF+P 
Sbjct: 57  RAAKNDLSGAGFTLDEFASLLSKYDYNFKPGDIVNGTVFALESKGAMIDIGAKTAAFMPL 116

Query: 456 SEASILRIKHVEEVGLFPGLEDDFYVMKSDDDHG 557
            E SI R++ + +V L PG   +F++M  +++ G
Sbjct: 117 QEVSINRVEGLSDV-LLPGEIREFFIMSEENEDG 149


>tr|A2CBU1|A2CBU1_PROM3 30S ribosomal protein S1, protein A
           OS=Prochlorococcus marinus (strain MIT 9303) GN=rps1a
           PE=4 SV=1
          Length = 367

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 42/94 (44%), Positives = 63/94 (67%)
 Frame = +3

Query: 276 RATENPLEGLSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPT 455
           RA +N L G  F+++EF+  LSKYD+NF+ G  V GTVF   + GA++DIGAK  AF+P 
Sbjct: 57  RAAKNDLSGAGFTLDEFASLLSKYDYNFKPGDIVNGTVFALESKGAMIDIGAKTAAFMPL 116

Query: 456 SEASILRIKHVEEVGLFPGLEDDFYVMKSDDDHG 557
            E SI R++ + +V L PG   +F++M  +++ G
Sbjct: 117 QEVSINRVEGLSDV-LLPGEIREFFIMSEENEDG 149


>tr|B4FUZ5|B4FUZ5_MAIZE 30S ribosomal protein S1 OS=Zea mays PE=2
           SV=1
          Length = 401

 Score = 89.4 bits (220), Expect = 1e-16
 Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 5/147 (3%)
 Frame = +3

Query: 138 GFTCSGLSGHRLFRAAQN---VSRIHCATAAVVP--KKKDNLLAVAEQHFLRATENPLEG 302
           G  C  LSG    R A      S + C T A+    ++++ +  V +    R    P+EG
Sbjct: 10  GLPCPPLSGASRRRPAAQRRPPSALVCGTYALTKDERERERMRQVFDDASERCRTAPMEG 69

Query: 303 LSFSMEEFSQALSKYDFNFEIGQTVKGTVFLANNNGALVDIGAKAPAFLPTSEASILRIK 482
           ++FS ++   A+   D + EIG  +KGTVF+  +NGA +DI +K+ AFLP  EA +L I 
Sbjct: 70  VAFSPDDLDTAVESTDIDTEIGSLIKGTVFMTTSNGAYIDIQSKSTAFLPLDEACLLDID 129

Query: 483 HVEEVGLFPGLEDDFYVMKSDDDHGTD 563
           +VEE G+ PGL ++F ++  D++ G +
Sbjct: 130 NVEEAGIRPGLVEEFMII--DENPGDE 154