DK953862 |
Clone id |
TST39A01NGRL0018_O13 |
Library |
TST39 |
Length |
636 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_O13. 5' end sequence. |
Accession |
DK953862 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL706Contig1 |
Sequence |
ATCTAATAATCAGAGTTAAAGATCCCAATGTATAGAGAGTGCTATCCCTTGTTGGATATC CACAGTACTTTTTTCTAACTTTTTGAGATGGAAGAGACTTTTGTTCCATTTCGTGGCATT ATCAACGATTTGAGAGGGCGCTTGAATTGTTACAAGGAGGATTGGGTTGGTGGCTTCACC TCTGGTTATAGAATTTTTGCTCCAACGACATACATATTTTTCGCATCAGCGATTCCTGTC ATATCCTTTGGAGAGCAACTTGAACGAGCAACCAATGGGGTCCTAACAGCTGTACAAACA TTAGCCTCAACCTCTCTGTGTGGCATTGCGCACTCCATCCTAGGGGGTCAGCCATTGCTT GTGCTTGGAGTAGCGGAGCCTACGGTTATAATGTACACGTTCATGTATGATTTTGTGAAG GATAAGAGCGAAGTCGGGCCACAGCTGTTTTTGGCTTGGGCAGGATGGGTTTGTATTTGG ACCTCATTTCTGTTGCTCTTAATGTCAATCTTCGGGGCATGTTCACTCATCAATAGATTC ACTCGAGTGGCTGGGGAGCTCTTTGGTTTGCTGATAGCCATGCTATTCATGCAGCAAGCT ATCAAGGGACTTGTTGAGGAGTTTCGAATCCCTGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8VYR7 |
Definition |
sp|Q8VYR7|BOR1_ARATH Boron transporter 1 OS=Arabidopsis thaliana |
Align length |
178 |
Score (bit) |
298.0 |
E-value |
2.0e-80 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q0T8 |
Definition |
tr|A7Q0T8|A7Q0T8_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
178 |
Score (bit) |
304.0 |
E-value |
3.0e-81 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953862|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_O13, 5' (636 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7Q0T8|A7Q0T8_VITVI Chromosome chr7 scaffold_42, whole genome... 304 3e-81 tr|A5AD16|A5AD16_VITVI Putative uncharacterized protein OS=Vitis... 304 3e-81 tr|A5JUZ5|A5JUZ5_9ROSI Boron transporter OS=Citrus macrophylla P... 302 1e-80 tr|Q7X9F3|Q7X9F3_ORYSJ Boron transporter OS=Oryza sativa subsp. ... 300 6e-80 tr|Q2QNH0|Q2QNH0_ORYSJ Os12g0566000 protein OS=Oryza sativa subs... 300 6e-80 tr|B6U4C0|B6U4C0_MAIZE Boron transporter 1 OS=Zea mays PE=2 SV=1 296 5e-79 tr|A7NVV7|A7NVV7_VITVI Chromosome chr5 scaffold_2, whole genome ... 296 7e-79 tr|B2LX03|B2LX03_LACSA Boron transporter OS=Lactuca sativa PE=2 ... 295 1e-78 tr|B6V758|B6V758_VITVI Boron transporter OS=Vitis vinifera PE=2 ... 293 5e-78 tr|A7PCZ0|A7PCZ0_VITVI Chromosome chr17 scaffold_12, whole genom... 293 8e-78 tr|A5ACR2|A5ACR2_VITVI Putative uncharacterized protein OS=Vitis... 293 8e-78 tr|B8LRN9|B8LRN9_PICSI Putative uncharacterized protein OS=Picea... 291 2e-77 tr|A3CII1|A3CII1_ORYSJ Putative uncharacterized protein OS=Oryza... 289 1e-76 tr|A8MS82|A8MS82_ARATH Uncharacterized protein At2g47160.2 OS=Ar... 284 3e-75 tr|A7P5N1|A7P5N1_VITVI Chromosome chr4 scaffold_6, whole genome ... 270 5e-71 tr|A5APS8|A5APS8_VITVI Putative uncharacterized protein OS=Vitis... 270 5e-71 tr|A7P7P5|A7P7P5_VITVI Chromosome chr9 scaffold_7, whole genome ... 270 7e-71 tr|B8AYM2|B8AYM2_ORYSI Putative uncharacterized protein OS=Oryza... 267 5e-70 tr|Q6AT21|Q6AT21_ORYSJ Os05g0176800 protein OS=Oryza sativa subs... 265 2e-69 tr|Q1ZYR6|Q1ZYR6_ORYSJ Boron transporter OS=Oryza sativa subsp. ... 265 2e-69 tr|A3B0H8|A3B0H8_ORYSJ Putative uncharacterized protein OS=Oryza... 265 2e-69 tr|Q1ZYR7|Q1ZYR7_ORYSJ Boron transporter OS=Oryza sativa subsp. ... 264 4e-69 tr|B8ADI8|B8ADI8_ORYSI Putative uncharacterized protein OS=Oryza... 264 4e-69 tr|A9SIA3|A9SIA3_PHYPA Predicted protein OS=Physcomitrella paten... 263 9e-69 tr|A9RZS8|A9RZS8_PHYPA Predicted protein OS=Physcomitrella paten... 263 9e-69 tr|Q0JQ90|Q0JQ90_ORYSJ Os01g0175600 protein (Fragment) OS=Oryza ... 261 3e-68 tr|B7EKR9|B7EKR9_ORYSJ cDNA clone:J023086K01, full insert sequen... 261 3e-68 tr|B8ADI6|B8ADI6_ORYSI Putative uncharacterized protein OS=Oryza... 260 6e-68 tr|A7PEY4|A7PEY4_VITVI Chromosome chr11 scaffold_13, whole genom... 257 5e-67 tr|B6SV45|B6SV45_MAIZE Boron transporter-like protein 2 OS=Zea m... 256 1e-66
>tr|A7Q0T8|A7Q0T8_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028176001 PE=4 SV=1 Length = 715
Score = 304 bits (778), Expect = 3e-81 Identities = 142/178 (79%), Positives = 164/178 (92%) Frame = +1
Query: 103 VPFRGIINDLRGRLNCYKEDWVGGFTSGYRIFAPTTYIFFASAIPVISFGEQLERATNGV 282 VPFRGI NDLRGRL CYK+DW GGF +G+RI APTTYIFFASAIPVISFGEQLER T GV Sbjct: 6 VPFRGIKNDLRGRLMCYKQDWAGGFRAGFRILAPTTYIFFASAIPVISFGEQLERNTEGV 65
Query: 283 LTAVQTLASTSLCGIAHSILGGQPLLVLGVAEPTVIMYTFMYDFVKDKSEVGPQLFLAWA 462 LTAVQTLAST++CGI HSI+GGQPLL+LGVAEPTVIMYTFM++F K++ ++G +LFLAW Sbjct: 66 LTAVQTLASTAICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPDLGRKLFLAWT 125
Query: 463 GWVCIWTSFLLLLMSIFGACSLINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPE 636 GWVC+WT+FLL L++I GACS+INRFTRVAGELFGLLIAMLFMQQAIKG+V+EFRIP+ Sbjct: 126 GWVCVWTAFLLFLLAILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGIVDEFRIPK 183
>tr|A5AD16|A5AD16_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025408 PE=4 SV=1 Length = 714
Score = 304 bits (778), Expect = 3e-81 Identities = 142/178 (79%), Positives = 164/178 (92%) Frame = +1
Query: 103 VPFRGIINDLRGRLNCYKEDWVGGFTSGYRIFAPTTYIFFASAIPVISFGEQLERATNGV 282 VPFRGI NDLRGRL CYK+DW GGF +G+RI APTTYIFFASAIPVISFGEQLER T GV Sbjct: 6 VPFRGIKNDLRGRLMCYKQDWAGGFRAGFRILAPTTYIFFASAIPVISFGEQLERNTEGV 65
Query: 283 LTAVQTLASTSLCGIAHSILGGQPLLVLGVAEPTVIMYTFMYDFVKDKSEVGPQLFLAWA 462 LTAVQTLAST++CGI HSI+GGQPLL+LGVAEPTVIMYTFM++F K++ ++G +LFLAW Sbjct: 66 LTAVQTLASTAICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPDLGRKLFLAWT 125
Query: 463 GWVCIWTSFLLLLMSIFGACSLINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPE 636 GWVC+WT+FLL L++I GACS+INRFTRVAGELFGLLIAMLFMQQAIKG+V+EFRIP+ Sbjct: 126 GWVCVWTAFLLFLLAILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGIVDEFRIPK 183
>tr|A5JUZ5|A5JUZ5_9ROSI Boron transporter OS=Citrus macrophylla PE=2 SV=1 Length = 714
Score = 302 bits (774), Expect = 1e-80 Identities = 142/178 (79%), Positives = 162/178 (91%) Frame = +1
Query: 103 VPFRGIINDLRGRLNCYKEDWVGGFTSGYRIFAPTTYIFFASAIPVISFGEQLERATNGV 282 VPFRGI NDL+GRL CYK+DW GGF +G+RI APTTYIFFASAIPVISFGEQLER TNG Sbjct: 6 VPFRGIKNDLKGRLMCYKQDWTGGFRAGFRILAPTTYIFFASAIPVISFGEQLERNTNGA 65
Query: 283 LTAVQTLASTSLCGIAHSILGGQPLLVLGVAEPTVIMYTFMYDFVKDKSEVGPQLFLAWA 462 LTAVQTLAST+LCGI HSI+GGQPLL+LGVAEPTV+MYTFM++F KD+ ++G +LFLAWA Sbjct: 66 LTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVLMYTFMFNFAKDRKDLGEKLFLAWA 125
Query: 463 GWVCIWTSFLLLLMSIFGACSLINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPE 636 GWVC WT+ LL L+SI GACS+INRFTR+AGELFGLLIAMLFMQQAI+G+VEEF IPE Sbjct: 126 GWVCAWTALLLFLLSILGACSIINRFTRIAGELFGLLIAMLFMQQAIRGVVEEFGIPE 183
>tr|Q7X9F3|Q7X9F3_ORYSJ Boron transporter OS=Oryza sativa subsp. japonica GN=BOR3 PE=2 SV=1 Length = 711
Score = 300 bits (767), Expect = 6e-80 Identities = 141/178 (79%), Positives = 160/178 (89%) Frame = +1
Query: 103 VPFRGIINDLRGRLNCYKEDWVGGFTSGYRIFAPTTYIFFASAIPVISFGEQLERATNGV 282 VP RGI NDL GRL CYK+DW GGF +G RI APTTYIFFASAIPVISFGEQLER T+GV Sbjct: 6 VPLRGIKNDLHGRLQCYKQDWTGGFRAGIRILAPTTYIFFASAIPVISFGEQLERNTDGV 65
Query: 283 LTAVQTLASTSLCGIAHSILGGQPLLVLGVAEPTVIMYTFMYDFVKDKSEVGPQLFLAWA 462 LTAVQTLAST+LCGI HS LGGQPLL+LGVAEPTV+MYTFM++F KD+ ++G +LFLAW Sbjct: 66 LTAVQTLASTALCGIIHSFLGGQPLLILGVAEPTVLMYTFMFNFAKDRPDLGRRLFLAWT 125
Query: 463 GWVCIWTSFLLLLMSIFGACSLINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPE 636 GWVC+WT+ LL L++I GACS+INRFTR+AGELFGLLIAMLFMQQAIKGLV+EFRIPE Sbjct: 126 GWVCVWTAILLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVDEFRIPE 183
>tr|Q2QNH0|Q2QNH0_ORYSJ Os12g0566000 protein OS=Oryza sativa subsp. japonica GN=Os12g0566000 PE=2 SV=1 Length = 711
Score = 300 bits (767), Expect = 6e-80 Identities = 141/178 (79%), Positives = 160/178 (89%) Frame = +1
Query: 103 VPFRGIINDLRGRLNCYKEDWVGGFTSGYRIFAPTTYIFFASAIPVISFGEQLERATNGV 282 VP RGI NDL GRL CYK+DW GGF +G RI APTTYIFFASAIPVISFGEQLER T+GV Sbjct: 6 VPLRGIKNDLHGRLQCYKQDWTGGFRAGIRILAPTTYIFFASAIPVISFGEQLERNTDGV 65
Query: 283 LTAVQTLASTSLCGIAHSILGGQPLLVLGVAEPTVIMYTFMYDFVKDKSEVGPQLFLAWA 462 LTAVQTLAST+LCGI HS LGGQPLL+LGVAEPTV+MYTFM++F KD+ ++G +LFLAW Sbjct: 66 LTAVQTLASTALCGIIHSFLGGQPLLILGVAEPTVLMYTFMFNFAKDRPDLGRRLFLAWT 125
Query: 463 GWVCIWTSFLLLLMSIFGACSLINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPE 636 GWVC+WT+ LL L++I GACS+INRFTR+AGELFGLLIAMLFMQQAIKGLV+EFRIPE Sbjct: 126 GWVCVWTAILLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVDEFRIPE 183
>tr|B6U4C0|B6U4C0_MAIZE Boron transporter 1 OS=Zea mays PE=2 SV=1 Length = 709
Score = 296 bits (759), Expect = 5e-79 Identities = 139/178 (78%), Positives = 160/178 (89%) Frame = +1
Query: 103 VPFRGIINDLRGRLNCYKEDWVGGFTSGYRIFAPTTYIFFASAIPVISFGEQLERATNGV 282 VP RGI +DL GRL CYK+DW GGF +G RI APTTYIFFASAIPVISFGEQLER T+GV Sbjct: 6 VPLRGIKDDLHGRLACYKQDWTGGFRAGIRILAPTTYIFFASAIPVISFGEQLERNTDGV 65
Query: 283 LTAVQTLASTSLCGIAHSILGGQPLLVLGVAEPTVIMYTFMYDFVKDKSEVGPQLFLAWA 462 LTAVQTLAST+LCGI HSI+GGQPLL+LGVAEPTV+MYTFM++F KD+ ++G LFLAW Sbjct: 66 LTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVLMYTFMFNFAKDRPDLGRNLFLAWT 125
Query: 463 GWVCIWTSFLLLLMSIFGACSLINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPE 636 GWVC+WT+ LL L++I GACS+INRFTR+AGELFGLLIAMLFMQQAIKGLV+EFR+PE Sbjct: 126 GWVCVWTAILLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVDEFRVPE 183
>tr|A7NVV7|A7NVV7_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019680001 PE=4 SV=1 Length = 717
Score = 296 bits (758), Expect = 7e-79 Identities = 138/177 (77%), Positives = 162/177 (91%) Frame = +1
Query: 103 VPFRGIINDLRGRLNCYKEDWVGGFTSGYRIFAPTTYIFFASAIPVISFGEQLERATNGV 282 VPFRGI NDL+GRL CYK+DW GG +G+RI APTTYIFFASAIPVISFGEQLE+ T+GV Sbjct: 6 VPFRGIKNDLQGRLLCYKQDWTGGLRAGFRILAPTTYIFFASAIPVISFGEQLEKNTDGV 65
Query: 283 LTAVQTLASTSLCGIAHSILGGQPLLVLGVAEPTVIMYTFMYDFVKDKSEVGPQLFLAWA 462 LTAVQTLAST+LCGI HSI+GGQPLL+LGVAEPTV+MYTFM++F KD+ ++GP+LFLAW Sbjct: 66 LTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMFNFAKDRPDLGPKLFLAWT 125
Query: 463 GWVCIWTSFLLLLMSIFGACSLINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIP 633 GWVC+WTS LL L++I GA S+INRFTR+AGELFGLLIAMLFMQ+AIKGL++EFRIP Sbjct: 126 GWVCVWTSGLLFLLAILGASSIINRFTRIAGELFGLLIAMLFMQEAIKGLIDEFRIP 182
>tr|B2LX03|B2LX03_LACSA Boron transporter OS=Lactuca sativa PE=2 SV=1 Length = 487
Score = 295 bits (756), Expect = 1e-78 Identities = 138/178 (77%), Positives = 160/178 (89%) Frame = +1
Query: 103 VPFRGIINDLRGRLNCYKEDWVGGFTSGYRIFAPTTYIFFASAIPVISFGEQLERATNGV 282 VPF+GI NDL GRL CYK+DW GGF +G+RI APTTYIFFASAIPVISFGEQL+R T G Sbjct: 6 VPFQGIKNDLDGRLTCYKQDWTGGFRAGFRILAPTTYIFFASAIPVISFGEQLDRNTEGA 65
Query: 283 LTAVQTLASTSLCGIAHSILGGQPLLVLGVAEPTVIMYTFMYDFVKDKSEVGPQLFLAWA 462 LTAVQTLAST++CG+ HSI+GGQPLL+LGVAEPTV+MYTFMY+F K + E+G LFLAW+ Sbjct: 66 LTAVQTLASTAICGMIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKQRPELGHNLFLAWS 125
Query: 463 GWVCIWTSFLLLLMSIFGACSLINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPE 636 GWVC+WT+ LL L++I GACS+INRFTRVAGELFGLLIAMLFMQQAI+GLV+EFRIPE Sbjct: 126 GWVCVWTAGLLFLLAILGACSIINRFTRVAGELFGLLIAMLFMQQAIRGLVDEFRIPE 183
>tr|B6V758|B6V758_VITVI Boron transporter OS=Vitis vinifera PE=2 SV=1 Length = 721
Score = 293 bits (751), Expect = 5e-78 Identities = 137/176 (77%), Positives = 161/176 (91%) Frame = +1
Query: 103 VPFRGIINDLRGRLNCYKEDWVGGFTSGYRIFAPTTYIFFASAIPVISFGEQLERATNGV 282 VPFRGI NDL+GRL CYK+DW GG +G+RI APTTYIFFASAIPVISFGEQLE+ T+GV Sbjct: 6 VPFRGIKNDLQGRLLCYKQDWTGGLRAGFRILAPTTYIFFASAIPVISFGEQLEKNTDGV 65
Query: 283 LTAVQTLASTSLCGIAHSILGGQPLLVLGVAEPTVIMYTFMYDFVKDKSEVGPQLFLAWA 462 LTAVQTLAST+LCGI HSI+GGQPLL+LGVAEPTV+MYTFM++F KD+ ++GP+LFLAW Sbjct: 66 LTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMFNFAKDRPDLGPKLFLAWT 125
Query: 463 GWVCIWTSFLLLLMSIFGACSLINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRI 630 GWVC+WTS LL L++I GA S+INRFTR+AGELFGLLIAMLFMQ+AIKGL++EFRI Sbjct: 126 GWVCVWTSGLLFLLAILGASSIINRFTRIAGELFGLLIAMLFMQEAIKGLIDEFRI 181
>tr|A7PCZ0|A7PCZ0_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016067001 PE=4 SV=1 Length = 698
Score = 293 bits (749), Expect = 8e-78 Identities = 136/178 (76%), Positives = 159/178 (89%) Frame = +1
Query: 103 VPFRGIINDLRGRLNCYKEDWVGGFTSGYRIFAPTTYIFFASAIPVISFGEQLERATNGV 282 VPFRGI NDL+GR+ CYK+DW GG +G I APTTYIFFASAIPVISFGEQLER TNG Sbjct: 6 VPFRGIKNDLKGRILCYKQDWTGGLRAGIGILAPTTYIFFASAIPVISFGEQLERYTNGT 65
Query: 283 LTAVQTLASTSLCGIAHSILGGQPLLVLGVAEPTVIMYTFMYDFVKDKSEVGPQLFLAWA 462 LTAVQTLAST+LCGI HSI+GGQPLL+LGVAEPTV+MYTFM++F KD+ ++G +LFLAW Sbjct: 66 LTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVLMYTFMFNFAKDRKDLGQELFLAWT 125
Query: 463 GWVCIWTSFLLLLMSIFGACSLINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFRIPE 636 GWVC+WT+ LL L++I GACS+INRFTR+AGELFGLLIAMLFMQQAI+G+VEEF IP+ Sbjct: 126 GWVCVWTALLLFLLAILGACSIINRFTRIAGELFGLLIAMLFMQQAIRGVVEEFGIPQ 183
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