DK953872 |
Clone id |
TST39A01NGRL0018_O23 |
Library |
TST39 |
Length |
623 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0018_O23. 5' end sequence. |
Accession |
DK953872 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL487Contig1 |
Sequence |
CGGGCATTGAATTGACCTCGCGCAGAGAGAGGGTGGCTATGGCATCTCTTTCCTTCGATC AGCTAGTAGCATCCTCTTCGAACCCAGACTTTTCCTCTACTAAATGCAGGCTTGGCTCAT ACCCATCTTACCGTGGATTTCATTCCCATTCTCTCCAGGCTCGCTCTAGTCAGAGGCCTC TGCGCAGGACATTCTTCATCAATCAACAAGCTGCCTTTTGCGCTCGAGCTGATGTCGCAG CTGTAACGCTTCCCAATGAGATTAAGTCAAGTTTAGAAATTGATTGGGACAATCTGGGTT TTGGATACCATGAAACTGATTTCATATATGTTTCGAAATGTGGCCCGGACGGTGAATGGA ATAAAGGAGAATTAGAACCTTTTGGTCCTTTGAAGCTAAGCCCTTCAGCTGGTATATTGA ATTATGGACAGGGAATCTTCGAAGGTCTGAAGGCGTACAAAACTGAGGATGATCGCGTGC TGCTTTTTAGGCCCGAGGAAAATGCCATGCGAATGATAGTTGGTGCAGATCGTTTGTGTA TGCCAACACTACCTGTTAACCTCTTCGTCCAGGCAGTGAAGCAAACTGTGCTAGCCAATA AACGATGGATTCCTCCTCCAGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FYA6 |
Definition |
sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana |
Align length |
199 |
Score (bit) |
182.0 |
E-value |
9.0e-46 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953872|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0018_O23, 5' (623 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase... 182 9e-46 sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase... 163 6e-40 sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase... 161 3e-39 sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase... 154 5e-37 sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotr... 153 8e-37 sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase... 147 3e-35 sp|Q9LE06|BCAT4_ARATH Probable branched-chain-amino-acid aminotr... 141 3e-33 sp|P54689|ILVE_HAEIN Branched-chain-amino-acid aminotransferase ... 109 1e-23 sp|Q9ZJF1|ILVE_HELPJ Branched-chain-amino-acid aminotransferase ... 106 8e-23 sp|O26004|ILVE_HELPY Branched-chain-amino-acid aminotransferase ... 103 5e-22 sp|O31461|YBGE_BACSU Putative branched-chain-amino-acid aminotra... 102 1e-21 sp|O86505|ILVE_STRCO Probable branched-chain-amino-acid aminotra... 99 1e-20 sp|P39576|ILVE_BACSU Putative branched-chain-amino-acid aminotra... 98 3e-20 sp|Q10399|ILVE_MYCTU Probable branched-chain-amino-acid aminotra... 92 3e-18 sp|O32954|ILVE_MYCLE Probable branched-chain-amino-acid aminotra... 90 1e-17 sp|Q6GJB4|ILVE_STAAR Probable branched-chain-amino-acid aminotra... 87 9e-17 sp|P63513|ILVE_STAAW Probable branched-chain-amino-acid aminotra... 85 3e-16 sp|Q6GBT3|ILVE_STAAS Probable branched-chain-amino-acid aminotra... 85 3e-16 sp|P99138|ILVE_STAAN Probable branched-chain-amino-acid aminotra... 85 3e-16 sp|P63512|ILVE_STAAM Probable branched-chain-amino-acid aminotra... 85 3e-16 sp|Q5HIC1|ILVE_STAAC Probable branched-chain-amino-acid aminotra... 85 3e-16 sp|Q5HRJ8|ILVE_STAEQ Probable branched-chain-amino-acid aminotra... 85 3e-16 sp|Q8CQ78|ILVE_STAES Probable branched-chain-amino-acid aminotra... 84 4e-16 sp|A7SLW1|BCAT_NEMVE Branched-chain-amino-acid aminotransferase ... 84 6e-16 sp|O14370|BCA1_SCHPO Branched-chain-amino-acid aminotransferase,... 77 5e-14 sp|P54688|BCAT_CAEEL Branched-chain-amino-acid aminotransferase,... 76 2e-13 sp|P24288|BCAT1_MOUSE Branched-chain-amino-acid aminotransferase... 75 2e-13 sp|P47176|BCA2_YEAST Branched-chain-amino-acid aminotransferase,... 75 3e-13 sp|O35854|BCAT2_RAT Branched-chain-amino-acid aminotransferase, ... 75 4e-13 sp|O35855|BCAT2_MOUSE Branched-chain-amino-acid aminotransferase... 75 4e-13
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Length = 415
Score = 182 bits (463), Expect = 9e-46 Identities = 94/199 (47%), Positives = 127/199 (63%) Frame = +3
Query: 27 ERVAMASLSFDQLVASSSNPDFSSTKCRLGSYPSYRGFHSHSLQARSSQRPLRRTFFINQ 206 ER A+AS + +S S+T RL S S R F S SL+ R P+ F +++ Sbjct: 2 ERSAVASGFHRNYILCASRAATSTT--RLHSLSSLRNFPSSSLRIRHCPSPISSNFIVSE 59
Query: 207 QXXXXXXXXXXXVTLPNEIKSSLEIDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFG 386 T ++ EIDWD + FG TD++Y KC DGE+++G+L+PFG Sbjct: 60 VSRNRRCDAVSSST--TDVTELAEIDWDKIDFGLKPTDYMYAMKCSRDGEFSQGQLQPFG 117
Query: 387 PLKLSPSAGILNYGQGIFEGLKAYKTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLF 566 + ++P+AG+LNYGQG+FEGLKAY+ +D +LLFRPEENA+RM GA+R+CMP+ V F Sbjct: 118 NIDINPAAGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQF 177
Query: 567 VQAVKQTVLANKRWIPPPG 623 V+AVK TVLANKRWIPPPG Sbjct: 178 VEAVKTTVLANKRWIPPPG 196
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Length = 413
Score = 163 bits (413), Expect = 6e-40 Identities = 74/117 (63%), Positives = 95/117 (81%), Gaps = 1/117 (0%) Frame = +3
Query: 276 EIDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKA 455 +IDWD +GFG D++YV KC DGE++KGEL+ FG +++SPSAG+LNYGQG+FEGLKA Sbjct: 78 DIDWDTVGFGLKPADYMYVMKCNIDGEFSKGELQRFGNIEISPSAGVLNYGQGLFEGLKA 137
Query: 456 YKTED-DRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPG 623 Y+ +D + +LLFRPEENA RM GA+R+CMP V FV+AV +TVLANKRW+PPPG Sbjct: 138 YRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETVLANKRWVPPPG 194
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Length = 388
Score = 161 bits (407), Expect = 3e-39 Identities = 70/116 (60%), Positives = 94/116 (81%) Frame = +3
Query: 276 EIDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKA 455 ++DWDNLGFG + D++YV KC DGE+ +GEL P+G ++LSPSAG+LNYGQ I+EG KA Sbjct: 55 DLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKA 114
Query: 456 YKTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPG 623 Y+ E+ ++LLFRP+ NA+RM +GA+R+ MP+ V+ FV AVKQT LANKRW+PP G Sbjct: 115 YRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAG 170
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Length = 384
Score = 154 bits (388), Expect = 5e-37 Identities = 68/116 (58%), Positives = 92/116 (79%) Frame = +3
Query: 276 EIDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKA 455 ++DWDNLGF TDF++ +K DG + +G L +G ++L+P+AGILNYGQG+ EG+KA Sbjct: 51 DVDWDNLGFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKA 110
Query: 456 YKTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPG 623 Y+ ED RVLLFRPE NAMRM +GA+R+CM + V+ F++ VKQTVLAN+RW+PPPG Sbjct: 111 YRGEDGRVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRWVPPPG 166
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Length = 367
Score = 153 bits (386), Expect = 8e-37 Identities = 68/115 (59%), Positives = 87/115 (75%) Frame = +3
Query: 279 IDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKAY 458 + WD LGF TD++YV+KC ++ GE+ P+G + +SP AGILNYGQG+FEGLKAY Sbjct: 24 VKWDELGFALVPTDYMYVAKCKQGESFSTGEIVPYGDISISPCAGILNYGQGLFEGLKAY 83
Query: 459 KTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPG 623 +TED R+ LFRP++NA+RM GADRLCM FV+AVKQTVLAN +W+PPPG Sbjct: 84 RTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTVLANNKWVPPPG 138
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Length = 356
Score = 147 bits (372), Expect = 3e-35 Identities = 63/115 (54%), Positives = 88/115 (76%) Frame = +3
Query: 279 IDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKAY 458 + W+ LGF D++YV+KC + +G++ P+G + +SP + ILNYGQG+FEGLKAY Sbjct: 21 VKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLFEGLKAY 80
Query: 459 KTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPG 623 +TEDDR+ +FRP++NA+RM GA+RLCM + FV+AVKQTVLANK+W+PPPG Sbjct: 81 RTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLANKKWVPPPG 135
>sp|Q9LE06|BCAT4_ARATH Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1 Length = 354
Score = 141 bits (355), Expect = 3e-33 Identities = 61/115 (53%), Positives = 85/115 (73%) Frame = +3
Query: 279 IDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKAY 458 + W+ L F + TD++YV+KC + +G++ PF L+L+P A +L YGQG++EGLKAY Sbjct: 20 VKWEELAFKFVRTDYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQYGQGLYEGLKAY 79
Query: 459 KTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPG 623 +TED R+LLFRP++N +R+ GADRL MP V+ FV A+KQ LANK+WIPPPG Sbjct: 80 RTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALANKKWIPPPG 134
>sp|P54689|ILVE_HAEIN Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1 Length = 343
Score = 109 bits (273), Expect = 1e-23 Identities = 53/116 (45%), Positives = 77/116 (66%) Frame = +3
Query: 276 EIDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKA 455 ++DW+NLGF Y +TD+ +++ DG+W++G+L L + + L+YGQ FEGLKA Sbjct: 3 DLDWNNLGFSYIKTDYRFIAHW-KDGKWDEGKLTTDSTLHIHEGSTALHYGQQCFEGLKA 61
Query: 456 YKTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPPPG 623 Y+ +D + LFRP+ NA RM ADRL MP +P LFV+A K+ V AN+ W+ P G Sbjct: 62 YRCKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVVKANQDWLGPYG 117
>sp|Q9ZJF1|ILVE_HELPJ Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1 Length = 340
Score = 106 bits (265), Expect = 8e-23 Identities = 49/113 (43%), Positives = 75/113 (66%) Frame = +3
Query: 279 IDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKAY 458 +DW NLGF Y +TDF +++ +G W++GEL L+LS + +L+YGQ FEGLKAY Sbjct: 7 LDWKNLGFSYIKTDFRFIATY-KNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAY 65
Query: 459 KTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPP 617 +++ + LLFRP ENA R+ +RL MP + LF++A + + AN++W+ P Sbjct: 66 RSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKANQKWLAP 118
>sp|O26004|ILVE_HELPY Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1 Length = 340
Score = 103 bits (258), Expect = 5e-22 Identities = 49/113 (43%), Positives = 74/113 (65%) Frame = +3
Query: 279 IDWDNLGFGYHETDFIYVSKCGPDGEWNKGELEPFGPLKLSPSAGILNYGQGIFEGLKAY 458 +DW NLGF Y +TDF +++ +G W++G L L+LS + +L+YGQ FEGLKAY Sbjct: 7 LDWKNLGFSYIKTDFRFIATY-KNGSWSQGGLVSENMLQLSEGSPVLHYGQACFEGLKAY 65
Query: 459 KTEDDRVLLFRPEENAMRMIVGADRLCMPTLPVNLFVQAVKQTVLANKRWIPP 617 +++ + LLFRP ENA R+ +RL MP + LF++A + V AN++W+ P Sbjct: 66 RSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKANQKWLAP 118
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q0WQT2 |
Definition |
tr|Q0WQT2|Q0WQT2_ARATH Branched-chain amino acid aminotransferase OS=Arabidopsis thaliana |
Align length |
199 |
Score (bit) |
182.0 |
E-value |
1.0e-44 |
Report |
|