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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953944
Clone id TST39A01NGRL0019_B24
Library
Length 608
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_B24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TGTAGCTGTGCACTGCAACTTCTTTCTGTCGAAGAAGAACACATCGTAGAATATGTAATC
AACGCTATAACGAGAACTTAGAAGTTATGGGTGGTGTAGATGATACCAAGGTGCAGAGTA
TGACGGGTTTGGCTGATTTGCAGCTGGTCTAGCTACTTGTGCAGCTCCAGGAGCTCATTC
CATGGGTGCAATATTGTCAGGGTGATCCAATAAGGCTCATCGATCATGTCTTCTCTGATG
AGATCCGTGAGCTTGTCGCGTCTCAAATGTGCTATGGGGCTGAGCCCAGCCCTCCCACAT
TCTGAATGTAGGAGGCGCAGCTCCACCTTGGGCTTGAGGAATGGGACATCTACCATCCAC
AGCAATGCCAGTCATCCCTCCAGTCCCATACAGCTGGGCCTTTTTAATGAGTATGAGGTG
TACAGAAGGTCTCTGTATGGTGGATTGGCCTACAAGGCTCTCCTGGTCGATGCTGCGGGC
ACGCTTATCGTCCCTTCAGAGCCTGCTGCCAAGGTCTATCACGATGTGGGGATTAAATAT
GGTGTGCAATGGTCAGAGTCTGAGATCCCTGAAAGCGGTATCGCTGGGCATACGCACAGC
CCTGGTCT
■■Homology search results ■■ -
sp_hit_id O14262
Definition sp|O14262|YFP5_SCHPO Putative uncharacterized hydrolase C7D4.05 OS=Schizosaccharomyces pombe
Align length 38
Score (bit) 30.4
E-value 7.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953944|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_B24, 5'
         (608 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O14262|YFP5_SCHPO Putative uncharacterized hydrolase C7D4.05 ...    30   7.4  

>sp|O14262|YFP5_SCHPO Putative uncharacterized hydrolase C7D4.05
           OS=Schizosaccharomyces pombe GN=SPAC7D4.05 PE=2 SV=2
          Length = 225

 Score = 30.4 bits (67), Expect = 7.4
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 454 KALLVDAAGTLIVPSEPAAKVYHDVGIKYGVQWSESEI 567
           K +  DA GT++  S+P   VY +V  KYGV  +  EI
Sbjct: 11  KLVTFDAFGTILHLSKPVPIVYSEVAQKYGVHATIDEI 48
tr_hit_id A9NMJ3
Definition tr|A9NMJ3|A9NMJ3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 87
Score (bit) 85.9
E-value 8.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953944|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_B24, 5'
         (608 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NMJ3|A9NMJ3_PICSI Putative uncharacterized protein OS=Picea...    86   8e-18
tr|A9NRW6|A9NRW6_PICSI Putative uncharacterized protein OS=Picea...    85   1e-17
tr|A9P0T4|A9P0T4_PICSI Putative uncharacterized protein OS=Picea...    84   3e-17
tr|A9NLF4|A9NLF4_PICSI Putative uncharacterized protein OS=Picea...    80   3e-16
tr|B6SLD8|B6SLD8_MAIZE Rhythmically expressed protein OS=Zea may...    72   3e-14
tr|A7QJJ5|A7QJJ5_VITVI Chromosome chr8 scaffold_106, whole genom...    77   5e-14
tr|Q9ZVB6|Q9ZVB6_ARATH Putative uncharacterized protein At2g4125...    78   2e-13
tr|Q8GRS0|Q8GRS0_ORYSJ Os07g0659400 protein OS=Oryza sativa subs...    72   1e-12
tr|B8B5I9|B8B5I9_ORYSI Putative uncharacterized protein OS=Oryza...    72   1e-12
tr|Q4F886|Q4F886_ORYSJ DT-related protein OS=Oryza sativa subsp....    72   1e-12
tr|B8APT4|B8APT4_ORYSI Putative uncharacterized protein OS=Oryza...    74   1e-12
tr|B6TFB5|B6TFB5_MAIZE Rhythmically expressed protein OS=Zea may...    74   1e-12
tr|A3AI18|A3AI18_ORYSJ Putative uncharacterized protein OS=Oryza...    74   1e-12
tr|A7QEF4|A7QEF4_VITVI Chromosome chr1 scaffold_84, whole genome...    42   0.036
tr|Q9M9T1|Q9M9T1_ARATH F14L17.7 protein OS=Arabidopsis thaliana ...    40   0.080
tr|Q84WA5|Q84WA5_ARATH Putative uncharacterized protein At1g1431...    40   0.080
tr|Q6AWS8|Q6AWS8_ARATH At1g14310 OS=Arabidopsis thaliana PE=2 SV=1     40   0.080
tr|B6TNH8|B6TNH8_MAIZE HAD-superfamily hydrolase, subfamily IA, ...    40   0.080
tr|Q6Z026|Q6Z026_ORYSJ Os08g0169800 protein OS=Oryza sativa subs...    39   0.31 
tr|B8BB56|B8BB56_ORYSI Putative uncharacterized protein OS=Oryza...    39   0.31 
tr|A8J1M4|A8J1M4_CHLRE Predicted protein (Fragment) OS=Chlamydom...    38   0.40 
tr|A9SDR8|A9SDR8_PHYPA Predicted protein (Fragment) OS=Physcomit...    37   0.89 
tr|A6GIY9|A6GIY9_9DELT Putative uncharacterized protein OS=Plesi...    34   7.5  

>tr|A9NMJ3|A9NMJ3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 321

 Score = 85.9 bits (211), Expect(2) = 8e-18
 Identities = 46/87 (52%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
 Frame = +1

Query: 310 RRRSSTLGLRNGTSTIHSNASHPSSPIQLGLFNE-YEVYRRSLYGGLAYKALLVDAAGTL 486
           RRR    G R   STI S ++  +  +  G   E Y+ YRRSLYGGL +KALLVDA GTL
Sbjct: 60  RRRGIEGGRRRCLSTIASASTTETKEMSGGGEQEWYDKYRRSLYGGLTHKALLVDAVGTL 119

Query: 487 IVPSEPAAKVYHDVGIKYGVQWSESEI 567
           ++PS+PAA++Y ++G+KYGV +SE EI
Sbjct: 120 VLPSQPAAQIYRNIGLKYGVCYSEDEI 146



 Score = 28.1 bits (61), Expect(2) = 8e-18
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 576 RYRWAYAQPW 605
           RYRWAY QPW
Sbjct: 149 RYRWAYQQPW 158


>tr|A9NRW6|A9NRW6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 321

 Score = 85.1 bits (209), Expect(2) = 1e-17
 Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
 Frame = +1

Query: 310 RRRSSTLGLRNGTSTIHSNASHPSSPIQLGLFNE-YEVYRRSLYGGLAYKALLVDAAGTL 486
           RRR    G R   S+I S ++  +  +  G   E Y+ YRRSLYGGL +KALLVDA GTL
Sbjct: 60  RRRGIEGGRRRCLSSIASTSTTETKEMSGGGEQEWYDKYRRSLYGGLTHKALLVDAVGTL 119

Query: 487 IVPSEPAAKVYHDVGIKYGVQWSESEI 567
           ++PS+PAA++Y ++G+KYGV +SE EI
Sbjct: 120 VLPSQPAAQIYRNIGLKYGVCYSEDEI 146



 Score = 28.1 bits (61), Expect(2) = 1e-17
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 576 RYRWAYAQPW 605
           RYRWAY QPW
Sbjct: 149 RYRWAYQQPW 158


>tr|A9P0T4|A9P0T4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 321

 Score = 84.0 bits (206), Expect(2) = 3e-17
 Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
 Frame = +1

Query: 310 RRRSSTLGLRNGTSTIHSNASHPSSPIQLGLFNE-YEVYRRSLYGGLAYKALLVDAAGTL 486
           RRR    G R   S+I S ++  +  +  G   E Y+ YRRSLYGGL +KALL+DA GTL
Sbjct: 60  RRRGIEGGRRRCLSSIASTSTTETKEMSGGGEQEWYDKYRRSLYGGLTHKALLLDAVGTL 119

Query: 487 IVPSEPAAKVYHDVGIKYGVQWSESEI 567
           ++PS+PAA++Y ++G+KYGV +SE EI
Sbjct: 120 VLPSQPAAQIYRNIGLKYGVCYSEDEI 146



 Score = 28.1 bits (61), Expect(2) = 3e-17
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 576 RYRWAYAQPW 605
           RYRWAY QPW
Sbjct: 149 RYRWAYQQPW 158


>tr|A9NLF4|A9NLF4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 251

 Score = 80.5 bits (197), Expect(2) = 3e-16
 Identities = 35/52 (67%), Positives = 46/52 (88%)
 Frame = +1

Query: 412 YEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVYHDVGIKYGVQWSESEI 567
           Y+ YRRSLYGGL +KALLVDA GTL++PS+PAA++Y ++G+KYGV +SE EI
Sbjct: 25  YDKYRRSLYGGLTHKALLVDAVGTLVLPSQPAAQIYRNIGLKYGVCYSEDEI 76



 Score = 28.1 bits (61), Expect(2) = 3e-16
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 576 RYRWAYAQPW 605
           RYRWAY QPW
Sbjct: 79  RYRWAYQQPW 88


>tr|B6SLD8|B6SLD8_MAIZE Rhythmically expressed protein OS=Zea mays
           PE=2 SV=1
          Length = 272

 Score = 72.0 bits (175), Expect(2) = 3e-14
 Identities = 32/53 (60%), Positives = 42/53 (79%)
 Frame = +1

Query: 409 EYEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVYHDVGIKYGVQWSESEI 567
           EY  YRR++YG + +KA+LVDAAGTL+ P+EP A+VY  +G KYGV +SE EI
Sbjct: 45  EYYDYRRAMYGDITHKAILVDAAGTLLAPTEPMAQVYRTIGQKYGVDYSEDEI 97



 Score = 30.0 bits (66), Expect(2) = 3e-14
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 576 RYRWAYAQPW 605
           RYRWAYAQPW
Sbjct: 100 RYRWAYAQPW 109


>tr|A7QJJ5|A7QJJ5_VITVI Chromosome chr8 scaffold_106, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000664001
           PE=4 SV=1
          Length = 303

 Score = 76.6 bits (187), Expect(2) = 5e-14
 Identities = 38/76 (50%), Positives = 55/76 (72%), Gaps = 7/76 (9%)
 Frame = +1

Query: 361 SNASHPSSPIQLGL-------FNEYEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVY 519
           S+A+  S+  +LGL         +YE YR++LYG + +KALLVDA GTL+VPS+P A++Y
Sbjct: 53  SSAAVASNESRLGLGGFEVLGLKDYEEYRKALYGEITHKALLVDAVGTLLVPSQPMAQIY 112

Query: 520 HDVGIKYGVQWSESEI 567
             +G KYGV++SE+EI
Sbjct: 113 RKIGEKYGVEYSETEI 128



 Score = 24.6 bits (52), Expect(2) = 5e-14
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 576 RYRWAYAQPW 605
           RYR AYAQPW
Sbjct: 131 RYRRAYAQPW 140


>tr|Q9ZVB6|Q9ZVB6_ARATH Putative uncharacterized protein At2g41250
           OS=Arabidopsis thaliana GN=At2g41250 PE=2 SV=1
          Length = 290

 Score = 77.8 bits (190), Expect(2) = 2e-13
 Identities = 34/56 (60%), Positives = 47/56 (83%)
 Frame = +1

Query: 400 LFNEYEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVYHDVGIKYGVQWSESEI 567
           +  EYE YRRSLYG + +KALLVDA GTL+VP++P A++Y ++G KYGV++SE+EI
Sbjct: 60  VLKEYEDYRRSLYGEITHKALLVDAVGTLLVPAQPTAQIYKNIGEKYGVEYSEAEI 115



 Score = 21.2 bits (43), Expect(2) = 2e-13
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 576 RYRWAYAQPW 605
           RYR AY +PW
Sbjct: 118 RYRRAYQKPW 127


>tr|Q8GRS0|Q8GRS0_ORYSJ Os07g0659400 protein OS=Oryza sativa subsp.
           japonica GN=OJ1477_F01.122 PE=4 SV=1
          Length = 304

 Score = 72.0 bits (175), Expect(2) = 1e-12
 Identities = 32/53 (60%), Positives = 42/53 (79%)
 Frame = +1

Query: 409 EYEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVYHDVGIKYGVQWSESEI 567
           EY  YRR++YG + +KA+LVDAAGTL+ P+EP A+VY  +G KYGV +SE EI
Sbjct: 55  EYYDYRRAIYGDITHKAILVDAAGTLLAPTEPMAQVYRTIGEKYGVNYSEDEI 107



 Score = 24.6 bits (52), Expect(2) = 1e-12
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 576 RYRWAYAQPW 605
           RYR AYAQPW
Sbjct: 110 RYRRAYAQPW 119


>tr|B8B5I9|B8B5I9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_27188 PE=4 SV=1
          Length = 282

 Score = 72.0 bits (175), Expect(2) = 1e-12
 Identities = 32/53 (60%), Positives = 42/53 (79%)
 Frame = +1

Query: 409 EYEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVYHDVGIKYGVQWSESEI 567
           EY  YRR++YG + +KA+LVDAAGTL+ P+EP A+VY  +G KYGV +SE EI
Sbjct: 55  EYYDYRRAIYGDITHKAILVDAAGTLLAPTEPMAQVYRTIGEKYGVNYSEDEI 107



 Score = 24.6 bits (52), Expect(2) = 1e-12
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 576 RYRWAYAQPW 605
           RYR AYAQPW
Sbjct: 110 RYRRAYAQPW 119


>tr|Q4F886|Q4F886_ORYSJ DT-related protein OS=Oryza sativa subsp.
           japonica GN=Dr1 PE=2 SV=1
          Length = 232

 Score = 72.0 bits (175), Expect(2) = 1e-12
 Identities = 32/53 (60%), Positives = 42/53 (79%)
 Frame = +1

Query: 409 EYEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVYHDVGIKYGVQWSESEI 567
           EY  YRR++YG + +KA+LVDAAGTL+ P+EP A+VY  +G KYGV +SE EI
Sbjct: 5   EYYDYRRAIYGDITHKAILVDAAGTLLAPTEPMAQVYRTIGEKYGVNYSEDEI 57



 Score = 24.6 bits (52), Expect(2) = 1e-12
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 576 RYRWAYAQPW 605
           RYR AYAQPW
Sbjct: 60  RYRRAYAQPW 69