DK953964 |
Clone id |
TST39A01NGRL0019_C20 |
Library |
TST39 |
Length |
557 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_C20. 5' end sequence. |
Accession |
DK953964 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL142Contig1 |
Sequence |
GTCCTAAAGGCATGGGTCCATCTGTGAGGAGGCTTTATGTTCAAGGCAAGGAGATTAATG GAGCAGGGATAAACTCCAGCTTTGCCGTACATCAGGATGTTGATGGACGAGCCACCGATG TGGCTCTTGGCTGGTCAATTGCTCTTGGTTCACCTTTCACCTTTGCAACAACCTTGGAAG ATGAATACAGGAGTGACATTTATGGTGAAAGAGGTATTTTGCTTGGTGCTGTACATGGGC TGGTTGAGGCGCTGTTTAGACGATACACCGAGGCAGGTATGCCTGAAGAGGATGCCTACA AGAACACGGTAGAAGGCATTACAGGTGTTATATCAAAGACAATCTCCACAAAGGGAATGC TGGCTGTGTACAACTCTTTAGATGAGCAAGGGAAGAAAGATTTTGAGATTGCCTACAGTT CCTCATATTACCCCTGCATGGACATCCTTTATGAATGTTACGAGGATGTGGCTTCAGGAA ATGAGATTCGCAGTGTGGTTATGGCCGGCCGCCGCTTTCAGGAAAAAGAGGGGCTTCCTG CTTTTCCGATGGGCAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q01292 |
Definition |
sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, chloroplastic OS=Spinacia oleracea |
Align length |
185 |
Score (bit) |
335.0 |
E-value |
9.0e-92 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953964|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_C20, 5' (557 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, chloroplastic ... 335 9e-92 sp|O82043|ILV5_PEA Ketol-acid reductoisomerase, chloroplastic OS... 329 5e-90 sp|Q05758|ILV5_ARATH Ketol-acid reductoisomerase, chloroplastic ... 327 2e-89 sp|P38674|ILV5_NEUCR Ketol-acid reductoisomerase, mitochondrial ... 100 6e-21 sp|P78827|ILV5_SCHPO Probable ketol-acid reductoisomerase, mitoc... 100 8e-21 sp|P06168|ILV5_YEAST Ketol-acid reductoisomerase, mitochondrial ... 96 9e-20 sp|A8FFW6|ILVC_BACP2 Ketol-acid reductoisomerase OS=Bacillus pum... 74 5e-13 sp|Q1J0T2|ILVC_DEIGD Ketol-acid reductoisomerase OS=Deinococcus ... 73 8e-13 sp|A7Z7B9|ILVC_BACA2 Ketol-acid reductoisomerase OS=Bacillus amy... 73 1e-12 sp|Q9RU74|ILVC_DEIRA Ketol-acid reductoisomerase OS=Deinococcus ... 72 1e-12 sp|P37253|ILVC_BACSU Ketol-acid reductoisomerase OS=Bacillus sub... 72 2e-12 sp|Q65GI7|ILVC_BACLD Ketol-acid reductoisomerase OS=Bacillus lic... 72 2e-12 sp|Q5SJ03|ILVC_THET8 Ketol-acid reductoisomerase OS=Thermus ther... 71 4e-12 sp|Q72JC8|ILVC_THET2 Ketol-acid reductoisomerase OS=Thermus ther... 71 4e-12 sp|Q2FM37|ILVC_METHJ Ketol-acid reductoisomerase OS=Methanospiri... 70 7e-12 sp|A4IRH9|ILVC_GEOTN Ketol-acid reductoisomerase OS=Geobacillus ... 70 7e-12 sp|A6LPX8|ILVC_CLOB8 Ketol-acid reductoisomerase OS=Clostridium ... 70 7e-12 sp|Q8EN66|ILVC_OCEIH Ketol-acid reductoisomerase OS=Oceanobacill... 70 9e-12 sp|A3CXJ5|ILVC_METMJ Ketol-acid reductoisomerase OS=Methanoculle... 70 9e-12 sp|Q9K8E7|ILVC_BACHD Ketol-acid reductoisomerase OS=Bacillus hal... 70 9e-12 sp|Q8DW43|ILVC_STRMU Ketol-acid reductoisomerase OS=Streptococcu... 69 1e-11 sp|A4J179|ILVC_DESRM Ketol-acid reductoisomerase OS=Desulfotomac... 69 1e-11 sp|A3DIE1|ILVC_CLOTH Ketol-acid reductoisomerase OS=Clostridium ... 69 1e-11 sp|Q3AEQ7|ILVC_CARHZ Ketol-acid reductoisomerase OS=Carboxydothe... 69 1e-11 sp|Q0AGM0|ILVC_NITEC Ketol-acid reductoisomerase OS=Nitrosomonas... 69 2e-11 sp|A3CQ86|ILVC_STRSV Ketol-acid reductoisomerase OS=Streptococcu... 69 2e-11 sp|Q5KWJ2|ILVC_GEOKA Ketol-acid reductoisomerase OS=Geobacillus ... 69 2e-11 sp|Q5WEN2|ILVC_BACSK Ketol-acid reductoisomerase OS=Bacillus cla... 69 2e-11 sp|O28294|ILVC_ARCFU Ketol-acid reductoisomerase OS=Archaeoglobu... 69 2e-11 sp|Q0AB89|ILVC_ALHEH Ketol-acid reductoisomerase OS=Alkalilimnic... 69 2e-11
>sp|Q01292|ILV5_SPIOL Ketol-acid reductoisomerase, chloroplastic OS=Spinacia oleracea GN=AHRI PE=1 SV=1 Length = 595
Score = 335 bits (859), Expect = 9e-92 Identities = 164/185 (88%), Positives = 176/185 (95%) Frame = +3
Query: 3 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSIALGSPFTFATTLED 182 PKGMGPSVRRLYVQGKE+NGAGINSSFAVHQDVDGRATDVALGWSIALGSPFTFATTLE Sbjct: 251 PKGMGPSVRRLYVQGKEVNGAGINSSFAVHQDVDGRATDVALGWSIALGSPFTFATTLEQ 310
Query: 183 EYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKGML 362 EY+SDI+GERGILLGAVHG+VE LFRRYTE+GM E+ AYKNTVE ITGVISKTISTKGML Sbjct: 311 EYKSDIFGERGILLGAVHGIVECLFRRYTESGMSEDLAYKNTVECITGVISKTISTKGML 370
Query: 363 AVYNSLDEQGKKDFEIAYSSSYYPCMDILYECYEDVASGNEIRSVVMAGRRFQEKEGLPA 542 A+YNSL E+GKKDF+ AYS+SYYP MDILYECYEDVASG+EIRSVV+AGRRF EKEGLPA Sbjct: 371 ALYNSLSEEGKKDFQAAYSASYYPSMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPA 430
Query: 543 FPMGK 557 FPMGK Sbjct: 431 FPMGK 435
>sp|O82043|ILV5_PEA Ketol-acid reductoisomerase, chloroplastic OS=Pisum sativum GN=PGAAIR PE=2 SV=1 Length = 581
Score = 329 bits (844), Expect = 5e-90 Identities = 160/185 (86%), Positives = 175/185 (94%) Frame = +3
Query: 3 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSIALGSPFTFATTLED 182 PKGMGPSVRRLYVQGKEINGAGINSSF VHQDVDGRAT+VALGWS+ALGSPFTFATTLE Sbjct: 235 PKGMGPSVRRLYVQGKEINGAGINSSFGVHQDVDGRATNVALGWSVALGSPFTFATTLEQ 294
Query: 183 EYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKGML 362 EY+SDI+GERGILLGAVHG+VE+LFRRYTE GM E+ AYKNTVE ITGVISKTIST+GML Sbjct: 295 EYKSDIFGERGILLGAVHGIVESLFRRYTENGMSEDLAYKNTVESITGVISKTISTQGML 354
Query: 363 AVYNSLDEQGKKDFEIAYSSSYYPCMDILYECYEDVASGNEIRSVVMAGRRFQEKEGLPA 542 AVYN+L E GKK+FE AYS+S+YPCM+ILYECYEDVASG+EIRSVV+AGRRF EKEGLPA Sbjct: 355 AVYNALSEDGKKEFEKAYSASFYPCMEILYECYEDVASGSEIRSVVLAGRRFYEKEGLPA 414
Query: 543 FPMGK 557 FPMGK Sbjct: 415 FPMGK 419
>sp|Q05758|ILV5_ARATH Ketol-acid reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=At3g58610 PE=2 SV=2 Length = 591
Score = 327 bits (839), Expect = 2e-89 Identities = 159/184 (86%), Positives = 173/184 (94%) Frame = +3
Query: 3 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSIALGSPFTFATTLED 182 PKGMGPSVRRLYVQGKEINGAGIN+SFAVHQDVDGRA DVALGWS+ALGSPFTFATTLE Sbjct: 245 PKGMGPSVRRLYVQGKEINGAGINASFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQ 304
Query: 183 EYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKGML 362 EYRSDI+GERGILLGAVHG+VE+LFRRYTE GM E+ AYKNTVE ITG IS+TIST+GML Sbjct: 305 EYRSDIFGERGILLGAVHGIVESLFRRYTENGMSEDLAYKNTVECITGTISRTISTQGML 364
Query: 363 AVYNSLDEQGKKDFEIAYSSSYYPCMDILYECYEDVASGNEIRSVVMAGRRFQEKEGLPA 542 AVYNSL E+GKKDFE AYS+S+YPCM+ILYECYEDV SG+EIRSVV+AGRRF EKEGLPA Sbjct: 365 AVYNSLSEEGKKDFETAYSASFYPCMEILYECYEDVQSGSEIRSVVLAGRRFYEKEGLPA 424
Query: 543 FPMG 554 FPMG Sbjct: 425 FPMG 428
>sp|P38674|ILV5_NEUCR Ketol-acid reductoisomerase, mitochondrial OS=Neurospora crassa GN=ilv-2 PE=3 SV=2 Length = 402
Score = 100 bits (248), Expect = 6e-21 Identities = 59/166 (35%), Positives = 92/166 (55%), Gaps = 3/166 (1%) Frame = +3
Query: 3 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSIALGSPFTFATTLED 182 PKG G +VR L+ +G+ GINSSFAV+QDV G+A + A+ +A+GS + + TT E Sbjct: 202 PKGSGRTVRSLFREGR-----GINSSFAVYQDVTGKAKEKAVALGVAVGSGYLYETTFEK 256
Query: 183 EYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKGML 362 E SD+YGERG L+G +HG+ A + E G +A+ TVE T + I GM Sbjct: 257 EVYSDLYGERGCLMGGIHGMFLAQYEVLRERGHSPSEAFNETVEEATQSLYPLIGAHGMD 316
Query: 363 AVYNSLD---EQGKKDFEIAYSSSYYPCMDILYECYEDVASGNEIR 491 ++++ +G D+ + + P + L Y+ V +G+E + Sbjct: 317 WMFDACSTTARRGAIDWTPKFKDALKPVFNNL---YDSVKNGDETK 359
>sp|P78827|ILV5_SCHPO Probable ketol-acid reductoisomerase, mitochondrial OS=Schizosaccharomyces pombe GN=ilv5 PE=1 SV=2 Length = 404
Score = 99.8 bits (247), Expect = 8e-21 Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 3/166 (1%) Frame = +3
Query: 3 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSIALGSPFTFATTLED 182 PKG G +VR L+ +G+ GINSSFAV+QDV G+A + A+G ++A+GS F + TT + Sbjct: 203 PKGSGRTVRTLFKEGR-----GINSSFAVYQDVTGKAQEKAIGLAVAVGSGFIYQTTFKK 257
Query: 183 EYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKG-- 356 E SD+ GERG L+G ++GL A ++ E G +A+ TVE T + I G Sbjct: 258 EVISDLVGERGCLMGGINGLFLAQYQVLRERGHSPAEAFNETVEEATQSLYPLIGKYGLD 317
Query: 357 -MLAVYNSLDEQGKKDFEIAYSSSYYPCMDILYECYEDVASGNEIR 491 M A ++ +G D+ + + +L E Y++V +GNE + Sbjct: 318 YMFAACSTTARRGAIDWTPRFLEAN---KKVLNELYDNVENGNEAK 360
>sp|P06168|ILV5_YEAST Ketol-acid reductoisomerase, mitochondrial OS=Saccharomyces cerevisiae GN=ILV5 PE=1 SV=1 Length = 395
Score = 96.3 bits (238), Expect = 9e-20 Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 3/166 (1%) Frame = +3
Query: 3 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSIALGSPFTFATTLED 182 PKG G +VR L+ +G+ GINSS+AV DV G+A + A ++A+GS + + TT E Sbjct: 196 PKGSGRTVRSLFKEGR-----GINSSYAVWNDVTGKAHEKAQALAVAIGSGYVYQTTFER 250
Query: 183 EYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKGML 362 E SD+YGERG L+G +HG+ A + E G +A+ TVE T + I GM Sbjct: 251 EVNSDLYGERGCLMGGIHGMFLAQYDVLRENGHSPSEAFNETVEEATQSLYPLIGKYGMD 310
Query: 363 AVYNSLD---EQGKKDFEIAYSSSYYPCMDILYECYEDVASGNEIR 491 +Y++ +G D+ + ++ P + + YE +G E + Sbjct: 311 YMYDACSTTARRGALDWYPIFKNALKP---VFQDLYESTKNGTETK 353
>sp|A8FFW6|ILVC_BACP2 Ketol-acid reductoisomerase OS=Bacillus pumilus (strain SAFR-032) GN=ilvC PE=3 SV=1 Length = 342
Score = 73.9 bits (180), Expect = 5e-13 Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 2/101 (1%) Frame = +3
Query: 3 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSIALGSPFT--FATTL 176 PKG G VRR Y QG AG+ + FA++QDV G+A D AL ++ A+G TT Sbjct: 129 PKGPGHLVRRTYEQG-----AGVPALFAIYQDVSGQAKDKALAYAKAIGGARAGVLETTF 183
Query: 177 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAY 299 ++E +D++GE+ +L G + LV+A F TEAG E AY Sbjct: 184 KEETETDLFGEQAVLCGGLTSLVKAGFETLTEAGYQPELAY 224
>sp|Q1J0T2|ILVC_DEIGD Ketol-acid reductoisomerase OS=Deinococcus geothermalis (strain DSM 11300) GN=ilvC PE=3 SV=1 Length = 336
Score = 73.2 bits (178), Expect = 8e-13 Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 2/128 (1%) Frame = +3
Query: 3 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSIALGSPFT--FATTL 176 PKG G +RR+YV +GAG+ S FAV QD G A D+AL ++ +G TT Sbjct: 131 PKGPGHMLRRVYV-----DGAGMPSIFAVGQDASGNARDLALAYARGIGGTRAGVLETTF 185
Query: 177 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKG 356 ++E +D++GE+ +L G V L++A F EAG E AY T+ + +I I KG Sbjct: 186 KEETETDLFGEQSVLCGGVTHLIQAGFETLVEAGYQPEIAYFETLHEVK-LIVDLIYEKG 244
Query: 357 MLAVYNSL 380 + +S+ Sbjct: 245 FEGMRHSI 252
>sp|A7Z7B9|ILVC_BACA2 Ketol-acid reductoisomerase OS=Bacillus amyloliquefaciens (strain FZB42) GN=ilvC PE=3 SV=1 Length = 342
Score = 72.8 bits (177), Expect = 1e-12 Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 2/101 (1%) Frame = +3
Query: 3 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSIALGSPFT--FATTL 176 PKG G VRR Y QG AG+ + FA++QDV G A D AL ++ +G TT Sbjct: 129 PKGPGHLVRRTYEQG-----AGVPALFAIYQDVSGEAKDTALAYAKGIGGARAGVLETTF 183
Query: 177 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAY 299 ++E +D++GE+ +L G + LV+A F TEAG E AY Sbjct: 184 KEETETDLFGEQAVLCGGLTALVKAGFETLTEAGYQPELAY 224
>sp|Q9RU74|ILVC_DEIRA Ketol-acid reductoisomerase OS=Deinococcus radiodurans GN=ilvC PE=3 SV=2 Length = 336
Score = 72.4 bits (176), Expect = 1e-12 Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 2/128 (1%) Frame = +3
Query: 3 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSIALG--SPFTFATTL 176 PKG G +RR+Y +GAG+ FAV QD G+A D+AL ++ +G TT Sbjct: 131 PKGPGHMLRRVYT-----DGAGMPGIFAVQQDASGKARDIALAYARGIGCTKAGVLETTF 185
Query: 177 EDEYRSDIYGERGILLGAVHGLVEALFRRYTEAGMPEEDAYKNTVEGITGVISKTISTKG 356 ++E +D++GE+ +L G V L++A F EAG E AY T+ + +I I KG Sbjct: 186 KEETETDLFGEQSVLCGGVTHLIQAGFETLVEAGYQPEIAYFETLHEVK-LIVDLIYEKG 244
Query: 357 MLAVYNSL 380 + +S+ Sbjct: 245 FEGMRHSI 252
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TQQ1 |
Definition |
tr|A9TQQ1|A9TQQ1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
185 |
Score (bit) |
338.0 |
E-value |
2.0e-91 |
Report |
|