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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953967
Clone id TST39A01NGRL0019_C23
Library
Length 574
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_C23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TCCTTGCCTCCTTTTAACTTGCCCACCTCATTGCGTCACCAAGATACGTGCCCCTCTCCT
CTCTCACAGAGCTACTACGAATACTGAGGCTTTGCCGCCGCCTCCTCCTCCTCTTCCTCT
GCTCCCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACAATA
GCTAGTTCTCCTCCTCCTCCTCCTCCTCTCTCCCCCCTCACAGGATAGCCACTCTTCTTC
TTTTTCCTCCCATACAATACTCAATACACAGCGCTCTCTCATGTATCACCTCAAGCTTCA
TCAAATTGTCCGTTTACGTGAAGCGCTTCAAAAATGGAGAAAACTGGCTCACAAGCGGAA
GAGCTTCTCGTCTAGCTCAAGCCGGCGCGGTGCAACATCCTCCATTCGTGTACCGTCTGG
GCATCTTGCAGTGTATGTCGGACAGGAGCGAGAGCGCTTCGTTATTAAAACCTCGCTTCT
TTCTCATCCACTCTTTAAAGCACTCTTGAGGAAGACAGAAGAAGAGGTCGGATTTTCATT
TACGAAGGTGGGGCTCACCATCCCTTGCGAAGTC
■■Homology search results ■■ -
sp_hit_id P32295
Definition sp|P32295|ARG7_PHAAU Indole-3-acetic acid-induced protein ARG7 OS=Phaseolus aureus
Align length 52
Score (bit) 60.8
E-value 5.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953967|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_C23, 5'
         (574 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P32295|ARG7_PHAAU Indole-3-acetic acid-induced protein ARG7 O...    61   5e-09
sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max P...    59   1e-08
sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max P...    59   2e-08
sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max ...    58   3e-08
sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=...    57   5e-08
sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max ...    57   5e-08
sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza...    30   8.6  

>sp|P32295|ARG7_PHAAU Indole-3-acetic acid-induced protein ARG7
           OS=Phaseolus aureus GN=ARG7 PE=2 SV=1
          Length = 92

 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +2

Query: 413 PSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPC 568
           P G+LAVYVG+  +RFVI  S L+ PLF+ LL + EEE G+     GLTIPC
Sbjct: 26  PKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPC 77


>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2
           SV=1
          Length = 82

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +2

Query: 413 PSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPC 568
           P G+LAVYVG++ +RFVI  S L+ P F+ LL + EEE G+     GLTIPC
Sbjct: 18  PKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPC 69


>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2
           SV=1
          Length = 82

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +2

Query: 413 PSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPC 568
           P G+LAVYVG++ +RFVI  S ++ P F+ LL + EEE G+     GLTIPC
Sbjct: 18  PKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPC 69


>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max
           PE=2 SV=1
          Length = 92

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 27/54 (50%), Positives = 35/54 (64%)
 Frame = +2

Query: 410 VPSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPCE 571
           VP G+L VYVG +  RF+I  S L+ P F+ LL + EEE G+     GLTIPC+
Sbjct: 25  VPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCK 78


>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2
           SV=1
          Length = 90

 Score = 57.4 bits (137), Expect = 5e-08
 Identities = 28/53 (52%), Positives = 35/53 (66%)
 Frame = +2

Query: 410 VPSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPC 568
           V  G+LAVYVG++  RFVI  S L+ P F+ LL + EEE G+     GLTIPC
Sbjct: 25  VEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPC 77


>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max
           PE=2 SV=1
          Length = 93

 Score = 57.4 bits (137), Expect = 5e-08
 Identities = 27/54 (50%), Positives = 34/54 (62%)
 Frame = +2

Query: 410 VPSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPCE 571
           VP G+ AVYVG +  RF I  S L+ P F+ LL + EEE G+     GLTIPC+
Sbjct: 26  VPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCK 79


>sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza
           sativa subsp. japonica GN=OSH10 PE=2 SV=1
          Length = 337

 Score = 30.0 bits (66), Expect = 8.6
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 446 ERERFVIKTSLLSHPLFKALLR 511
           ERE   IK  ++SHPL+ ALLR
Sbjct: 56  ERETDAIKAKIMSHPLYPALLR 77
tr_hit_id A7PDR4
Definition tr|A7PDR4|A7PDR4_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera
Align length 55
Score (bit) 73.6
E-value 7.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953967|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_C23, 5'
         (574 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PDR4|A7PDR4_VITVI Chromosome chr11 scaffold_13, whole genom...    74   7e-12
tr|B8LPR0|B8LPR0_PICSI Putative uncharacterized protein OS=Picea...    72   3e-11
tr|A7QV31|A7QV31_VITVI Chromosome undetermined scaffold_184, who...    72   3e-11
tr|B7FHD3|B7FHD3_MEDTR Putative uncharacterized protein OS=Medic...    71   5e-11
tr|A5C9E6|A5C9E6_VITVI Putative uncharacterized protein OS=Vitis...    71   5e-11
tr|Q9FUW0|Q9FUW0_TULGE Auxin-induced protein TGSAUR21 OS=Tulipa ...    70   6e-11
tr|B8LN65|B8LN65_PICSI Putative uncharacterized protein OS=Picea...    70   6e-11
tr|Q9M249|Q9M249_ARATH Putative uncharacterized protein F7M19_13...    70   1e-10
tr|A0MF00|A0MF00_ARATH Putative uncharacterized protein (Fragmen...    70   1e-10
tr|Q8H6T6|Q8H6T6_PHAVU Auxin-regulated protein OS=Phaseolus vulg...    69   2e-10
tr|A9NQK8|A9NQK8_PICSI Putative uncharacterized protein OS=Picea...    69   2e-10
tr|Q8LE18|Q8LE18_ARATH Putative uncharacterized protein OS=Arabi...    69   2e-10
tr|Q8GWV6|Q8GWV6_ARATH Putative uncharacterized protein At5g2081...    69   2e-10
tr|Q2V359|Q2V359_ARATH Uncharacterized protein At5g20810.2 OS=Ar...    69   2e-10
tr|O65694|O65694_ARATH Putative uncharacterized protein AT4g3475...    68   3e-10
tr|A9P7Y9|A9P7Y9_POPTR Putative uncharacterized protein OS=Popul...    68   3e-10
tr|Q9SKP2|Q9SKP2_ARATH Putative auxin-regulated protein (At2g212...    68   4e-10
tr|B6T2P5|B6T2P5_MAIZE SAUR31-auxin-responsive SAUR family membe...    68   4e-10
tr|A5C242|A5C242_VITVI Putative uncharacterized protein OS=Vitis...    68   4e-10
tr|A5AQT6|A5AQT6_VITVI Putative uncharacterized protein (Chromos...    68   4e-10
tr|Q9SIG9|Q9SIG9_ARATH Putative auxin-regulated protein OS=Arabi...    67   5e-10
tr|Q6NMZ3|Q6NMZ3_ARATH At4g34750 OS=Arabidopsis thaliana PE=2 SV=1     67   5e-10
tr|Q9M712|Q9M712_MAIZE Putative uncharacterized protein saur1 OS...    67   7e-10
tr|Q9FUV9|Q9FUV9_TULGE Auxin-induced protein TGSAUR22 OS=Tulipa ...    67   7e-10
tr|A9PCV8|A9PCV8_POPTR Putative uncharacterized protein OS=Popul...    67   7e-10
tr|Q9LR01|Q9LR01_ARATH F10A5.20 OS=Arabidopsis thaliana PE=4 SV=1      67   9e-10
tr|Q5Z8X4|Q5Z8X4_ORYSJ Auxin-induced protein-like OS=Oryza sativ...    67   9e-10
tr|Q0D9S2|Q0D9S2_ORYSJ Os06g0701900 protein OS=Oryza sativa subs...    67   9e-10
tr|A9TT06|A9TT06_PHYPA Predicted protein (Fragment) OS=Physcomit...    67   9e-10
tr|A7PPC0|A7PPC0_VITVI Chromosome chr8 scaffold_23, whole genome...    67   9e-10

>tr|A7PDR4|A7PDR4_VITVI Chromosome chr11 scaffold_13, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016384001
           PE=4 SV=1
          Length = 163

 Score = 73.6 bits (179), Expect = 7e-12
 Identities = 36/55 (65%), Positives = 41/55 (74%)
 Frame = +2

Query: 410 VPSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPCEV 574
           VP G+LAVYVG E  RF+I TS L+HPLFK LL K EEE GF  +  GLTIPCE+
Sbjct: 78  VPKGYLAVYVGSELRRFIIPTSYLTHPLFKVLLEKVEEEFGFDHSG-GLTIPCEI 131


>tr|B8LPR0|B8LPR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 142

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 35/54 (64%), Positives = 40/54 (74%)
 Frame = +2

Query: 410 VPSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPCE 571
           VP GH AVYVG ER RFVI T+ L+H LF+ LL K EEE GF   ++GLTIPCE
Sbjct: 60  VPKGHCAVYVGSERSRFVIPTTYLNHSLFRVLLEKAEEEYGFDH-QMGLTIPCE 112


>tr|A7QV31|A7QV31_VITVI Chromosome undetermined scaffold_184, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00007142001 PE=4 SV=1
          Length = 262

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
 Frame = +2

Query: 293 KLHQIVRLREALQKWRKLA-----HKXXXXXXXXXXXXXXXXXXVPSGHLAVYVGQERER 457
           K+ QIVRL++ +Q+W+ ++                          PSG LAVYVG +R R
Sbjct: 109 KIRQIVRLKQVMQRWKTMSVSLRPRSIRSFSDSDSDCTSGSIRRTPSGFLAVYVGADRRR 168

Query: 458 FVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPCEV 574
           FVI T LL+ P+F ALL K EEE G   +  GL +PCEV
Sbjct: 169 FVIPTRLLNLPIFVALLNKAEEEFGLR-SSGGLVLPCEV 206


>tr|B7FHD3|B7FHD3_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=4 SV=1
          Length = 101

 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 35/53 (66%), Positives = 38/53 (71%)
 Frame = +2

Query: 410 VPSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPC 568
           VP GHLAVYVG + +RFVI  S LSHPLFK LL   EEE GF+    GLTIPC
Sbjct: 35  VPKGHLAVYVGNDHKRFVIPISYLSHPLFKDLLDWAEEEFGFNHPMGGLTIPC 87


>tr|A5C9E6|A5C9E6_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_011169 PE=4 SV=1
          Length = 170

 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
 Frame = +2

Query: 290 LKLHQIVRLREALQKWRKLAHKXXXXXXXXXXXXXXXXXX----------VPSGHLAVYV 439
           LK++QIVRL++ ++KW+ ++ K                             PSG LAVYV
Sbjct: 5   LKINQIVRLKQVMKKWKAMSMKLRHGPSPDATDTDTDSEIDTDRGASTPRTPSGFLAVYV 64

Query: 440 GQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPCEV 574
             ERERF++ T  ++ P+F  LL++ EEE GF F+  G+ +PCEV
Sbjct: 65  ASERERFLVPTRYVNLPVFVTLLKRAEEEHGFKFSG-GIVVPCEV 108


>tr|Q9FUW0|Q9FUW0_TULGE Auxin-induced protein TGSAUR21 OS=Tulipa
           gesneriana GN=SAUR21 PE=4 SV=1
          Length = 107

 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 32/54 (59%), Positives = 41/54 (75%)
 Frame = +2

Query: 410 VPSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPCE 571
           VP GH AVY+G++R RF++  SLL+HP F++LLR  EEE GF    +GLTIPCE
Sbjct: 43  VPKGHFAVYIGEKRSRFIVPISLLAHPEFQSLLRAAEEEFGFD-NDMGLTIPCE 95


>tr|B8LN65|B8LN65_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 139

 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 35/55 (63%), Positives = 42/55 (76%)
 Frame = +2

Query: 410 VPSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPCEV 574
           VP G+LAVYVG+ER RF+I TS LS P+F+ LL + EEE GF   + GLTIPCEV
Sbjct: 69  VPEGYLAVYVGRERRRFIIPTSYLSRPVFRTLLDRAEEEFGFDH-QGGLTIPCEV 122


>tr|Q9M249|Q9M249_ARATH Putative uncharacterized protein F7M19_130
           (Auxin-responsive protein-like protein) OS=Arabidopsis
           thaliana GN=F7M19_130 PE=2 SV=1
          Length = 160

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 48/122 (39%), Positives = 54/122 (44%), Gaps = 29/122 (23%)
 Frame = +2

Query: 296 LHQIVRLREALQKW-----------------------------RKLAHKXXXXXXXXXXX 388
           + QIVRL+E LQKW                             R L  K           
Sbjct: 12  IKQIVRLKEILQKWQTVTIGSKSDDGELGARKHTAIISPVINKRLLDLKTCDSDEETTCQ 71

Query: 389 XXXXXXXVPSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPC 568
                  VP G+LAVYVG E  RF+I T+ LSH LFK LL K EEE GF  +   LTIPC
Sbjct: 72  SPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSG-ALTIPC 130

Query: 569 EV 574
           EV
Sbjct: 131 EV 132


>tr|A0MF00|A0MF00_ARATH Putative uncharacterized protein (Fragment)
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 161

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 48/122 (39%), Positives = 54/122 (44%), Gaps = 29/122 (23%)
 Frame = +2

Query: 296 LHQIVRLREALQKW-----------------------------RKLAHKXXXXXXXXXXX 388
           + QIVRL+E LQKW                             R L  K           
Sbjct: 12  IKQIVRLKEILQKWQTVTIGSKSDDGELGARKHTAIISPVINKRLLDLKTCDSDEETTCQ 71

Query: 389 XXXXXXXVPSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPC 568
                  VP G+LAVYVG E  RF+I T+ LSH LFK LL K EEE GF  +   LTIPC
Sbjct: 72  SPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSG-ALTIPC 130

Query: 569 EV 574
           EV
Sbjct: 131 EV 132


>tr|Q8H6T6|Q8H6T6_PHAVU Auxin-regulated protein OS=Phaseolus
           vulgaris GN=SAUR1 PE=2 SV=1
          Length = 156

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 45/120 (37%), Positives = 53/120 (44%), Gaps = 27/120 (22%)
 Frame = +2

Query: 296 LHQIVRLREALQKW---------------------------RKLAHKXXXXXXXXXXXXX 394
           + QIVRL+E  QKW                           ++L +              
Sbjct: 12  IRQIVRLKEMFQKWQTVTLGSKESNHDSDVARPGGIPPMINKRLTNVLYCDSDEDSCYSP 71

Query: 395 XXXXXVPSGHLAVYVGQERERFVIKTSLLSHPLFKALLRKTEEEVGFSFTKVGLTIPCEV 574
                VP G+LAVYVG E  RF+I TS LSH LFK LL K  EE GF     GLTIPCE+
Sbjct: 72  QPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFD-QSGGLTIPCEI 130