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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953969
Clone id TST39A01NGRL0019_D01
Library
Length 546
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_D01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTGCAACTTCTTTCTGTCGAAGAAGAACACATCGTAGAATATGTAATCAACGCTATAACG
AGAACTTAGAAGTTATGGGTGGTGTAGATGATACCAAGGTGCAGAGTATGACGGGTTTGG
CTGATTTGCAGCTGGTCTAGCTACTTGTGCAGCTCCAGGAGCTCATTCCATGGGTGCAAT
ATTGTCAGGGTGATCCAATAAGGCTCATCGATCATGTCTTCTCTGATGAGATCCGTGAGC
TTGTCGCGTCTCAAATGTGCTATGGGGCTGAGCCCAGCCCTCCCACATTCTGAATGTAGG
AGGCGCAGCTCCACCTTGGGCTTGAGGAATGGGACATCTACCATCCACAGCAATGCCAGT
CATCCCTCCAGTCCCATACAGCTGGGCCTTTTTAATGAGTATGAGGTGTACAGAAGGTCT
CTGTATGGTGGATTGGCCTACAAGGCTCTCCTGGTCGATGCTGCGGGCACGCTTATCGTC
CCTTCAGAGCCTGCTGCCAAGGTCTATCACGATGTGGGGATTAAATATGGTGTGCAATGG
TCAGAG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953969|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_D01, 5'
         (546 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A9NMJ3
Definition tr|A9NMJ3|A9NMJ3_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 84
Score (bit) 82.4
E-value 1.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953969|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_D01, 5'
         (546 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NMJ3|A9NMJ3_PICSI Putative uncharacterized protein OS=Picea...    82   1e-14
tr|A9NRW6|A9NRW6_PICSI Putative uncharacterized protein OS=Picea...    82   2e-14
tr|A9P0T4|A9P0T4_PICSI Putative uncharacterized protein OS=Picea...    80   5e-14
tr|A9NLF4|A9NLF4_PICSI Putative uncharacterized protein OS=Picea...    77   6e-13
tr|Q9ZVB6|Q9ZVB6_ARATH Putative uncharacterized protein At2g4125...    74   5e-12
tr|A7QJJ5|A7QJJ5_VITVI Chromosome chr8 scaffold_106, whole genom...    73   1e-11
tr|B8APT4|B8APT4_ORYSI Putative uncharacterized protein OS=Oryza...    70   7e-11
tr|B6TFB5|B6TFB5_MAIZE Rhythmically expressed protein OS=Zea may...    70   7e-11
tr|A3AI18|A3AI18_ORYSJ Putative uncharacterized protein OS=Oryza...    70   7e-11
tr|Q8GRS0|Q8GRS0_ORYSJ Os07g0659400 protein OS=Oryza sativa subs...    69   2e-10
tr|Q4F886|Q4F886_ORYSJ DT-related protein OS=Oryza sativa subsp....    69   2e-10
tr|B8B5I9|B8B5I9_ORYSI Putative uncharacterized protein OS=Oryza...    69   2e-10
tr|B6SLD8|B6SLD8_MAIZE Rhythmically expressed protein OS=Zea may...    69   2e-10
tr|B6TNH8|B6TNH8_MAIZE HAD-superfamily hydrolase, subfamily IA, ...    39   0.23 
tr|A7QEF4|A7QEF4_VITVI Chromosome chr1 scaffold_84, whole genome...    37   0.52 
tr|Q9M9T1|Q9M9T1_ARATH F14L17.7 protein OS=Arabidopsis thaliana ...    36   1.5  
tr|Q84WA5|Q84WA5_ARATH Putative uncharacterized protein At1g1431...    36   1.5  
tr|Q6AWS8|Q6AWS8_ARATH At1g14310 OS=Arabidopsis thaliana PE=2 SV=1     36   1.5  
tr|A9SDR8|A9SDR8_PHYPA Predicted protein (Fragment) OS=Physcomit...    36   1.5  
tr|Q6Z026|Q6Z026_ORYSJ Os08g0169800 protein OS=Oryza sativa subs...    35   2.0  
tr|B8BB56|B8BB56_ORYSI Putative uncharacterized protein OS=Oryza...    35   2.0  
tr|A8J1M4|A8J1M4_CHLRE Predicted protein (Fragment) OS=Chlamydom...    35   2.6  
tr|A6GIY9|A6GIY9_9DELT Putative uncharacterized protein OS=Plesi...    34   5.8  

>tr|A9NMJ3|A9NMJ3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 321

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
 Frame = +1

Query: 298 RRRSSTLGLRNGTSTIHSNASHPSSPIQLGLFNE-YEVYRRSLYGGLAYKALLVDAAGTL 474
           RRR    G R   STI S ++  +  +  G   E Y+ YRRSLYGGL +KALLVDA GTL
Sbjct: 60  RRRGIEGGRRRCLSTIASASTTETKEMSGGGEQEWYDKYRRSLYGGLTHKALLVDAVGTL 119

Query: 475 IVPSEPAAKVYHDVGIKYGVQWSE 546
           ++PS+PAA++Y ++G+KYGV +SE
Sbjct: 120 VLPSQPAAQIYRNIGLKYGVCYSE 143


>tr|A9NRW6|A9NRW6_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 321

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
 Frame = +1

Query: 298 RRRSSTLGLRNGTSTIHSNASHPSSPIQLGLFNE-YEVYRRSLYGGLAYKALLVDAAGTL 474
           RRR    G R   S+I S ++  +  +  G   E Y+ YRRSLYGGL +KALLVDA GTL
Sbjct: 60  RRRGIEGGRRRCLSSIASTSTTETKEMSGGGEQEWYDKYRRSLYGGLTHKALLVDAVGTL 119

Query: 475 IVPSEPAAKVYHDVGIKYGVQWSE 546
           ++PS+PAA++Y ++G+KYGV +SE
Sbjct: 120 VLPSQPAAQIYRNIGLKYGVCYSE 143


>tr|A9P0T4|A9P0T4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 321

 Score = 80.5 bits (197), Expect = 5e-14
 Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
 Frame = +1

Query: 298 RRRSSTLGLRNGTSTIHSNASHPSSPIQLGLFNE-YEVYRRSLYGGLAYKALLVDAAGTL 474
           RRR    G R   S+I S ++  +  +  G   E Y+ YRRSLYGGL +KALL+DA GTL
Sbjct: 60  RRRGIEGGRRRCLSSIASTSTTETKEMSGGGEQEWYDKYRRSLYGGLTHKALLLDAVGTL 119

Query: 475 IVPSEPAAKVYHDVGIKYGVQWSE 546
           ++PS+PAA++Y ++G+KYGV +SE
Sbjct: 120 VLPSQPAAQIYRNIGLKYGVCYSE 143


>tr|A9NLF4|A9NLF4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 251

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 33/49 (67%), Positives = 44/49 (89%)
 Frame = +1

Query: 400 YEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVYHDVGIKYGVQWSE 546
           Y+ YRRSLYGGL +KALLVDA GTL++PS+PAA++Y ++G+KYGV +SE
Sbjct: 25  YDKYRRSLYGGLTHKALLVDAVGTLVLPSQPAAQIYRNIGLKYGVCYSE 73


>tr|Q9ZVB6|Q9ZVB6_ARATH Putative uncharacterized protein At2g41250
           OS=Arabidopsis thaliana GN=At2g41250 PE=2 SV=1
          Length = 290

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 32/53 (60%), Positives = 44/53 (83%)
 Frame = +1

Query: 388 LFNEYEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVYHDVGIKYGVQWSE 546
           +  EYE YRRSLYG + +KALLVDA GTL+VP++P A++Y ++G KYGV++SE
Sbjct: 60  VLKEYEDYRRSLYGEITHKALLVDAVGTLLVPAQPTAQIYKNIGEKYGVEYSE 112


>tr|A7QJJ5|A7QJJ5_VITVI Chromosome chr8 scaffold_106, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000664001
           PE=4 SV=1
          Length = 303

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 7/73 (9%)
 Frame = +1

Query: 349 SNASHPSSPIQLGL-------FNEYEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVY 507
           S+A+  S+  +LGL         +YE YR++LYG + +KALLVDA GTL+VPS+P A++Y
Sbjct: 53  SSAAVASNESRLGLGGFEVLGLKDYEEYRKALYGEITHKALLVDAVGTLLVPSQPMAQIY 112

Query: 508 HDVGIKYGVQWSE 546
             +G KYGV++SE
Sbjct: 113 RKIGEKYGVEYSE 125


>tr|B8APT4|B8APT4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_11613 PE=4 SV=1
          Length = 291

 Score = 70.1 bits (170), Expect = 7e-11
 Identities = 31/56 (55%), Positives = 43/56 (76%)
 Frame = +1

Query: 379 QLGLFNEYEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVYHDVGIKYGVQWSE 546
           +L    EY  YR+S+YG + ++ALLVDA GTL+VP++P AKVY  +G KYGV++SE
Sbjct: 37  ELSAAREYYDYRKSVYGDVTHRALLVDAVGTLVVPAQPTAKVYKSIGEKYGVKYSE 92


>tr|B6TFB5|B6TFB5_MAIZE Rhythmically expressed protein OS=Zea mays
           PE=2 SV=1
          Length = 290

 Score = 70.1 bits (170), Expect = 7e-11
 Identities = 34/83 (40%), Positives = 50/83 (60%)
 Frame = +1

Query: 298 RRRSSTLGLRNGTSTIHSNASHPSSPIQLGLFNEYEVYRRSLYGGLAYKALLVDAAGTLI 477
           +RR  T       S  +       +  +L    EY  YR+S+YG + ++ALLVDA GTL+
Sbjct: 28  QRRLGTTSAAETESKKNKEEEEEGAGWELSAAREYYDYRKSIYGDVTHRALLVDAVGTLV 87

Query: 478 VPSEPAAKVYHDVGIKYGVQWSE 546
           VP++P A+VY  +G KYGV++SE
Sbjct: 88  VPAQPTAQVYKSIGEKYGVKYSE 110


>tr|A3AI18|A3AI18_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_010440 PE=4 SV=1
          Length = 267

 Score = 70.1 bits (170), Expect = 7e-11
 Identities = 31/56 (55%), Positives = 43/56 (76%)
 Frame = +1

Query: 379 QLGLFNEYEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVYHDVGIKYGVQWSE 546
           +L    EY  YR+S+YG + ++ALLVDA GTL+VP++P AKVY  +G KYGV++SE
Sbjct: 37  ELSAAREYYDYRKSVYGDVTHRALLVDAVGTLVVPAQPTAKVYKSIGEKYGVKYSE 92


>tr|Q8GRS0|Q8GRS0_ORYSJ Os07g0659400 protein OS=Oryza sativa subsp.
           japonica GN=OJ1477_F01.122 PE=4 SV=1
          Length = 304

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 30/50 (60%), Positives = 40/50 (80%)
 Frame = +1

Query: 397 EYEVYRRSLYGGLAYKALLVDAAGTLIVPSEPAAKVYHDVGIKYGVQWSE 546
           EY  YRR++YG + +KA+LVDAAGTL+ P+EP A+VY  +G KYGV +SE
Sbjct: 55  EYYDYRRAIYGDITHKAILVDAAGTLLAPTEPMAQVYRTIGEKYGVNYSE 104