BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953977|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_D10, 5'
         (542 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8F522|MNMG_THELT tRNA uridine 5-carboxymethylaminomethyl mod...    31   4.5  
sp|Q68FD9|K1549_MOUSE UPF0606 protein KIAA1549 OS=Mus musculus G...    31   4.5  

>sp|A8F522|MNMG_THELT tRNA uridine 5-carboxymethylaminomethyl
           modification enzyme mnmG OS=Thermotoga lettingae (strain
           ATCC BAA-301 / DSM 14385 / TMO) GN=mnmG PE=3 SV=1
          Length = 605

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -3

Query: 531 GPKYVPSTKTSRKR*SFVEAPTRGRGKLTIAPASSSTW*YGACGLSTTVPY 379
           GP+Y PS +        V+ P++   ++ + P   +T  Y   GLST++PY
Sbjct: 257 GPRYCPSIEDK-----VVKFPSKNMHQIFVEPEGKTTGEYYLNGLSTSLPY 302


>sp|Q68FD9|K1549_MOUSE UPF0606 protein KIAA1549 OS=Mus musculus
           GN=Kiaa1549 PE=1 SV=2
          Length = 1799

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = -2

Query: 394 HHSAIPILSIHHPPLSQNLSSFNTIAAASTSA*YFLHHAPSLLRFSTFLPVGALSLSTMP 215
           H +++P    H  P+    S F+T+  +  S     HH P L   S+ +P    S+S  P
Sbjct: 628 HLTSLPTTVFHLTPILTESSPFSTLTPSDGSVRVTDHHTPVLPTPSSVIPSSTESISD-P 686

Query: 214 HLYCASQHFSQ 182
           +L  +S   S+
Sbjct: 687 YLSASSSLVSE 697

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953977|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_D10, 5'
         (542 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RMA9|A9RMA9_PHYPA Predicted protein (Fragment) OS=Physcomit...    38   0.39 
tr|Q5DZH4|Q5DZH4_VIBF1 Conserved protein OS=Vibrio fischeri (str...    34   4.4  
tr|B5EUQ5|B5EUQ5_VIBFM Putative uncharacterized protein OS=Vibri...    34   4.4  
tr|B6MT86|B6MT86_BRAFL Putative uncharacterized protein OS=Branc...    33   9.7  

>tr|A9RMA9|A9RMA9_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_24474 PE=4 SV=1
          Length = 319

 Score = 37.7 bits (86), Expect = 0.39
 Identities = 15/19 (78%), Positives = 18/19 (94%)
 Frame = +2

Query: 485 DQRFLLVFVLGTYFGPHIQ 541
           DQRFLLVF+LGTYFGP ++
Sbjct: 1   DQRFLLVFILGTYFGPDLR 19


>tr|Q5DZH4|Q5DZH4_VIBF1 Conserved protein OS=Vibrio fischeri (strain
           ATCC 700601 / ES114) GN=ybgA PE=4 SV=1
          Length = 314

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +2

Query: 341 ILGERGMMDGQYRYGTVVERPQAPYHH---VEEDAGAIVSLPRPRVGASTNDQRFLLV 505
           ++GE    DG ++      +  +PY +   +  + G+ +S+PRP +   TND+R  LV
Sbjct: 11  VIGESVRFDGGHKSNKFASKVLSPYFNYIPICPEVGSGMSVPRPTIRLMTNDERIALV 68


>tr|B5EUQ5|B5EUQ5_VIBFM Putative uncharacterized protein OS=Vibrio
           fischeri (strain MJ11) GN=VFMJ11_A0875 PE=4 SV=1
          Length = 314

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +2

Query: 341 ILGERGMMDGQYRYGTVVERPQAPYHH---VEEDAGAIVSLPRPRVGASTNDQRFLLV 505
           ++GE    DG ++      +  +PY +   +  + G+ +S+PRP +   TND+R  LV
Sbjct: 11  VIGESVRFDGGHKSNKFASKVLSPYFNYIPICPEVGSGMSVPRPTIRLMTNDERIALV 68


>tr|B6MT86|B6MT86_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_59653 PE=4 SV=1
          Length = 483

 Score = 33.1 bits (74), Expect = 9.7
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
 Frame = -1

Query: 347 PKFEQL*HNCCCIYFCL---VLPPPCP 276
           P+   L  +CCC++ CL   V PPPCP
Sbjct: 380 PRLLPLVISCCCLFVCLFVYVFPPPCP 406