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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK953989
Clone id TST39A01NGRL0019_D23
Library
Length 642
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_D23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTTCCTGCTACAGACGGTCAGGAATCGCGATCGCCGTGCTCTAGTGAACTAGCATTCGGA
ACACAGGCCTTGGTGACCTATTTGAACATATCGCTAGAGAATTTTTGGCAAGGCAAACTG
GAGCGTCTAGCTGTTTGGGTGGGGGGCAGCCTTGCCTCTGCATTTTTTGCATCTCTGGAA
CGGTGCTCATGCATCAATCTTGAAACAACTGATGCTGATGAAGATGAGGAAGCAGATGGG
AAACCGTTAATTCCCATGAGCAGGGAGCCTGTACAGCAAGAAAAGTGGGTGCCTGAAATG
GTCATCCAGATTGATCAAGCCAATGTGGAGCCTTCTCCTTCAAAGTAGCAGCAGGCTTCA
AGCTTGCTTCAATGCACGGACTGAGGGGGCCCTGAAGAAGTGTCAAAGCAGTCGCTTCAA
CAGAAAGGCAGTTGCTAGTCTTTCTGCATAGCTATGTGCGATTTCCAGATCCTACTAAAG
TTTGATGAATTTGTATGGGAGTGTGGCATAAGAGCCATTAGACACCATTAGACAACACTT
TTGGATTCGACATGTAGTTTTGTCTGGTTTGTTTTGTGCTTGGATTTTATTGCCTCATGA
TTTGATATGCAGCTAAAATCCCTATGTGGAACCTGACTAAAA
■■Homology search results ■■ -
sp_hit_id Q66HA2
Definition sp|Q66HA2|CR3L1_RAT cAMP-responsive element-binding protein 3-like protein 1 OS=Rattus norvegicus
Align length 36
Score (bit) 30.8
E-value 6.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953989|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_D23, 5'
         (642 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q66HA2|CR3L1_RAT cAMP-responsive element-binding protein 3-li...    31   6.2  

>sp|Q66HA2|CR3L1_RAT cAMP-responsive element-binding protein 3-like
           protein 1 OS=Rattus norvegicus GN=Creb3l1 PE=2 SV=1
          Length = 520

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 442 KTSNCLSVEATALTLLQGPLSPCIEASLKPAATLKE 335
           +T  CL V A    L+ G L+PC+ A    + T+KE
Sbjct: 370 QTGTCLMVAALCFVLVLGSLAPCLPAFSSGSKTVKE 405
tr_hit_id A7QWG1
Definition tr|A7QWG1|A7QWG1_VITVI Chromosome undetermined scaffold_203, whole genome shotgun sequence OS=Vitis vinifera
Align length 29
Score (bit) 51.6
E-value 4.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK953989|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_D23, 5'
         (642 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7QWG1|A7QWG1_VITVI Chromosome undetermined scaffold_203, who...    52   4e-05
tr|A9NT62|A9NT62_PICSI Putative uncharacterized protein OS=Picea...    51   7e-05
tr|Q9FRG1|Q9FRG1_ORYSJ Expressed protein (Putative uncharacteriz...    50   2e-04
tr|A2XKK7|A2XKK7_ORYSI Putative uncharacterized protein OS=Oryza...    50   2e-04
tr|Q8LNF1|Q8LNF1_ORYSJ Os10g0502100 protein OS=Oryza sativa subs...    47   0.001
tr|Q6K7R6|Q6K7R6_ORYSJ Os02g0826400 protein OS=Oryza sativa subs...    47   0.001
tr|B8AF59|B8AF59_ORYSI Putative uncharacterized protein OS=Oryza...    47   0.001
tr|B6TBS6|B6TBS6_MAIZE Putative uncharacterized protein OS=Zea m...    47   0.001
tr|B4FGZ8|B4FGZ8_MAIZE Putative uncharacterized protein OS=Zea m...    47   0.001
tr|A3ACW8|A3ACW8_ORYSJ Putative uncharacterized protein OS=Oryza...    47   0.001
tr|A2Z926|A2Z926_ORYSI Putative uncharacterized protein OS=Oryza...    47   0.001
tr|B6T6C1|B6T6C1_MAIZE Putative uncharacterized protein OS=Zea m...    46   0.002
tr|A7QSS2|A7QSS2_VITVI Chromosome chr4 scaffold_162, whole genom...    45   0.003
tr|Q9SN67|Q9SN67_ARATH Putative uncharacterized protein F25I24.2...    45   0.005
tr|A9PCJ9|A9PCJ9_POPTR Putative uncharacterized protein OS=Popul...    44   0.008
tr|A5ANY9|A5ANY9_VITVI Putative uncharacterized protein OS=Vitis...    43   0.014
tr|A9PE30|A9PE30_POPTR Putative uncharacterized protein OS=Popul...    42   0.042
tr|Q0WQ09|Q0WQ09_ARATH Putative uncharacterized protein OS=Arabi...    41   0.055
tr|B6TFH9|B6TFH9_MAIZE Putative uncharacterized protein OS=Zea m...    37   0.79 
tr|A9PCD8|A9PCD8_POPTR Putative uncharacterized protein OS=Popul...    37   0.79 
tr|Q1QW87|Q1QW87_CHRSD Molybdopterin binding protein OS=Chromoha...    35   5.1  
tr|Q2QLP0|Q2QLP0_ORYSJ Os12g0634600 protein OS=Oryza sativa subs...    34   6.7  
tr|A2ZN35|A2ZN35_ORYSI Putative uncharacterized protein OS=Oryza...    34   6.7  

>tr|A7QWG1|A7QWG1_VITVI Chromosome undetermined scaffold_203, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00008640001 PE=4 SV=1
          Length = 147

 Score = 51.6 bits (122), Expect = 4e-05
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +1

Query: 115 KLERLAVWVGGSLASAFFASLERCSCINL 201
           +L+R+A WVG S+ASAFFASLERCSCINL
Sbjct: 80  RLDRMANWVGTSVASAFFASLERCSCINL 108


>tr|A9NT62|A9NT62_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 122

 Score = 50.8 bits (120), Expect = 7e-05
 Identities = 25/46 (54%), Positives = 29/46 (63%)
 Frame = +1

Query: 115 KLERLAVWVGGSLASAFFASLERCSCINLXXXXXXXXXXXXGKPLI 252
           KL+R AVWVG S+ SAFFASLERCSCI L             +PL+
Sbjct: 40  KLDRAAVWVGTSVVSAFFASLERCSCITLSNTDTEDEEEAKDRPLM 85


>tr|Q9FRG1|Q9FRG1_ORYSJ Expressed protein (Putative uncharacterized
           protein) OS=Oryza sativa subsp. japonica GN=Os03g47210
           PE=4 SV=1
          Length = 124

 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 20/28 (71%), Positives = 26/28 (92%)
 Frame = +1

Query: 118 LERLAVWVGGSLASAFFASLERCSCINL 201
           L+R+A WVGG +A+AFFASLERCSC+N+
Sbjct: 38  LDRVAGWVGGGIAAAFFASLERCSCVNV 65


>tr|A2XKK7|A2XKK7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_12986 PE=4 SV=1
          Length = 124

 Score = 49.7 bits (117), Expect = 2e-04
 Identities = 20/28 (71%), Positives = 26/28 (92%)
 Frame = +1

Query: 118 LERLAVWVGGSLASAFFASLERCSCINL 201
           L+R+A WVGG +A+AFFASLERCSC+N+
Sbjct: 38  LDRVAGWVGGGIAAAFFASLERCSCVNV 65


>tr|Q8LNF1|Q8LNF1_ORYSJ Os10g0502100 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0078O01.13 PE=4 SV=1
          Length = 89

 Score = 47.0 bits (110), Expect = 0.001
 Identities = 20/29 (68%), Positives = 25/29 (86%)
 Frame = +1

Query: 115 KLERLAVWVGGSLASAFFASLERCSCINL 201
           KLE  A+WVG S+ASAFFAS+E CSCI++
Sbjct: 16  KLEGYAIWVGASVASAFFASMESCSCIHV 44


>tr|Q6K7R6|Q6K7R6_ORYSJ Os02g0826400 protein OS=Oryza sativa subsp.
           japonica GN=P0452F04.17 PE=4 SV=1
          Length = 82

 Score = 47.0 bits (110), Expect = 0.001
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +1

Query: 118 LERLAVWVGGSLASAFFASLERCSCINL 201
           +E  A WVG S+ SAFFASLERCSCINL
Sbjct: 1   MESWASWVGASVTSAFFASLERCSCINL 28


>tr|B8AF59|B8AF59_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09527 PE=4 SV=1
          Length = 82

 Score = 47.0 bits (110), Expect = 0.001
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +1

Query: 118 LERLAVWVGGSLASAFFASLERCSCINL 201
           +E  A WVG S+ SAFFASLERCSCINL
Sbjct: 1   MESWASWVGASVTSAFFASLERCSCINL 28


>tr|B6TBS6|B6TBS6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 92

 Score = 47.0 bits (110), Expect = 0.001
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +1

Query: 118 LERLAVWVGGSLASAFFASLERCSCINL 201
           +E  A WVG S+ SAFFASLERCSCINL
Sbjct: 1   MESWATWVGTSVTSAFFASLERCSCINL 28


>tr|B4FGZ8|B4FGZ8_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 83

 Score = 47.0 bits (110), Expect = 0.001
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +1

Query: 118 LERLAVWVGGSLASAFFASLERCSCINL 201
           +E  A WVG S+ SAFFASLERCSCINL
Sbjct: 1   MESWATWVGTSVTSAFFASLERCSCINL 28


>tr|A3ACW8|A3ACW8_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008640 PE=4 SV=1
          Length = 119

 Score = 47.0 bits (110), Expect = 0.001
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +1

Query: 118 LERLAVWVGGSLASAFFASLERCSCINL 201
           +E  A WVG S+ SAFFASLERCSCINL
Sbjct: 1   MESWASWVGASVTSAFFASLERCSCINL 28