DK953990 |
Clone id |
TST39A01NGRL0019_D24 |
Library |
TST39 |
Length |
542 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_D24. 5' end sequence. |
Accession |
DK953990 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL21Contig1 |
Sequence |
CTTGTTCACAAGCACCGTCATACACACACATACAGGCCTCTAACACCCGCAGTGCAGGCC AGAGCTCCTCTGTCTTCTCCATCTCTCCTTTTTGAATCGTGCAGGAATGGCTAGCAATGG AGTTGTGACTGTCTATGGCAATGGTGCCATCTCTGATCCCAAGAAGTCATCTTATGCAGT CAAGGTGGGTCTTGCTCAGATGCTCCGAGGAGGTGTTATTATGGATGTTGTGAATGCAGA GCAGGCTCGAATTGCGGAAGAGGCAGGCGCTACTGCCGTAATGGCCCTCGAACGTGTGCC TGCGGACATCAGGGCTGAGGGTGGTGTGGCTCGCATGAGTGATCCTGGTTTGATCAAGGA GATCAAGAATGCTGTCACTATTCCTGTGATGGCCAAAGCCAGAATTGGGCATTTTGTGGA AGCGCAGGTACTTGAGGCCATTGGTGTGGATTACATTGATGAGAGTGAGGTCCTTACCCC AGCGGATGATGTGAACCACATCAACAAGCACAACTTTCGTATTCCTTTTGTTTGTGGCTG CC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9AT63 |
Definition |
sp|Q9AT63|PDX1_GINBI Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba |
Align length |
145 |
Score (bit) |
266.0 |
E-value |
5.0e-71 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q45FF0 |
Definition |
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max |
Align length |
144 |
Score (bit) |
247.0 |
E-value |
3.0e-64 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK953990|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_D24, 5' (542 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 247 3e-64 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 246 4e-64 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 245 1e-63 tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 242 8e-63 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 239 5e-62 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 239 7e-62 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 238 2e-61 tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 236 8e-61 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 236 8e-61 tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subs... 233 4e-60 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 233 4e-60 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 233 6e-60 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 232 1e-59 tr|A2YH94|A2YH94_ORYSI Putative uncharacterized protein OS=Oryza... 232 1e-59 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 230 4e-59 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 223 4e-57 tr|Q4WUD7|Q4WUD7_ASPFU Pyridoxine biosynthesis protein OS=Asperg... 218 1e-55 tr|B0Y3W1|B0Y3W1_ASPFC Pyridoxine biosynthesis protein OS=Asperg... 218 1e-55 tr|A2QGS0|A2QGS0_ASPNC Contig An03c0120, complete genome OS=Aspe... 218 1e-55 tr|A1DF23|A1DF23_NEOFI Pyridoxine biosynthesis protein OS=Neosar... 218 1e-55 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 217 4e-55 tr|Q0CDB7|Q0CDB7_ASPTN Pyridoxine biosynthesis protein PDX1 OS=A... 217 4e-55 tr|Q2U7S1|Q2U7S1_ASPOR Stationary phase-induced protein OS=Asper... 216 5e-55 tr|B8NEJ0|B8NEJ0_ASPFL Pyridoxine biosynthesis protein OS=Asperg... 216 5e-55 tr|A6R037|A6R037_AJECN Pyridoxal biosynthesis lyase pdxS OS=Ajel... 215 1e-54 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 214 2e-54 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 214 2e-54 tr|A1CAP7|A1CAP7_ASPCL Pyridoxine biosynthesis protein OS=Asperg... 214 2e-54 tr|B6HQD1|B6HQD1_PENCH Pc22g15930 protein OS=Penicillium chrysog... 213 5e-54 tr|A8NFX3|A8NFX3_COPC7 Putative uncharacterized protein OS=Copri... 213 5e-54
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 247 bits (631), Expect = 3e-64 Identities = 123/144 (85%), Positives = 135/144 (93%) Frame = +2
Query: 110 ASNGVVTVYGNGAISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMAL 289 + +GVVTVYGNGAI++ KKS ++VKVGLAQMLRGGVIMDVV+AEQARIAEEAGA AVMAL Sbjct: 4 SGSGVVTVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVDAEQARIAEEAGACAVMAL 63
Query: 290 ERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESE 469 ERVPADIRA+GGVARMSDP LI +IK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DESE Sbjct: 64 ERVPADIRAQGGVARMSDPQLINDIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESE 123
Query: 470 VLTPADDVNHINKHNFRIPFVCGC 541 VLT ADD NHINKHNFRIPFVCGC Sbjct: 124 VLTLADDANHINKHNFRIPFVCGC 147
>tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein isoform B (Putative pyridoxine biosynthesis protein isoform A) OS=Nicotiana tabacum GN=Pdx1-B PE=4 SV=1 Length = 309
Score = 246 bits (629), Expect = 4e-64 Identities = 125/146 (85%), Positives = 137/146 (93%), Gaps = 1/146 (0%) Frame = +2
Query: 107 MASNGVVTVYGNGAISDP-KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 283 MA +GVVT+YGNGA+++ K+S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA AVM Sbjct: 1 MAGSGVVTLYGNGALTETTKQSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60
Query: 284 ALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 463 ALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120
Query: 464 SEVLTPADDVNHINKHNFRIPFVCGC 541 SEVLT ADD NHINKHNFRIPFVCGC Sbjct: 121 SEVLTLADDENHINKHNFRIPFVCGC 146
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 245 bits (626), Expect = 1e-63 Identities = 126/146 (86%), Positives = 136/146 (93%), Gaps = 1/146 (0%) Frame = +2
Query: 107 MASNGVVTVYGNGA-ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 283 M +GVVTVYGNGA I++ KKS ++VKVGLAQMLRGGVIMDVVNA+QARIAEEAGA AVM Sbjct: 1 MEGSGVVTVYGNGAAITETKKSPFSVKVGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
Query: 284 ALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 463 ALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120
Query: 464 SEVLTPADDVNHINKHNFRIPFVCGC 541 SEVLT AD+ NHINKHNFRIPFVCGC Sbjct: 121 SEVLTLADEDNHINKHNFRIPFVCGC 146
>tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170297 PE=4 SV=1 Length = 315
Score = 242 bits (618), Expect = 8e-63 Identities = 128/151 (84%), Positives = 136/151 (90%), Gaps = 6/151 (3%) Frame = +2
Query: 107 MASNGVVTVY---GNGAI--SDPKKS-SYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAG 268 M NGVV +Y GNG + ++ KKS SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAG Sbjct: 1 MEGNGVVAIYRNNGNGLLENNNSKKSVSYAVKVGLAQMLRGGVIMDVVDANQARIAEEAG 60
Query: 269 ATAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGV 448 A AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGV Sbjct: 61 AVAVMALERVPADIRAEGGVARMSDPAMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGV 120
Query: 449 DYIDESEVLTPADDVNHINKHNFRIPFVCGC 541 DYIDESEVLTPADDVNHINKHN+RIPFVCGC Sbjct: 121 DYIDESEVLTPADDVNHINKHNYRIPFVCGC 151
>tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181982 PE=4 SV=1 Length = 314
Score = 239 bits (611), Expect = 5e-62 Identities = 125/150 (83%), Positives = 130/150 (86%), Gaps = 5/150 (3%) Frame = +2
Query: 107 MASNGVVTVYGNGAIS-----DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 271 M NGVV VY N + K SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAGA Sbjct: 1 MEGNGVVAVYHNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDAAQARIAEEAGA 60
Query: 272 TAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 451 AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVD Sbjct: 61 VAVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVD 120
Query: 452 YIDESEVLTPADDVNHINKHNFRIPFVCGC 541 YIDESEVLTPADDVNHINKHN+RIPFVCGC Sbjct: 121 YIDESEVLTPADDVNHINKHNYRIPFVCGC 150
>tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medicago truncatula PE=2 SV=1 Length = 314
Score = 239 bits (610), Expect = 7e-62 Identities = 122/150 (81%), Positives = 135/150 (90%), Gaps = 5/150 (3%) Frame = +2
Query: 107 MASNGVVTVYGNGAISDP-----KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 271 M +GVVTVYGNGA+++ K S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA Sbjct: 1 MEGSGVVTVYGNGALTETTSTTTKSSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 60
Query: 272 TAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 451 AVMALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LE++G+D Sbjct: 61 CAVMALERVPADIRAQGGVARMSDPQLIKEIKAAVTIPVMAKARIGHFVEAQILESLGID 120
Query: 452 YIDESEVLTPADDVNHINKHNFRIPFVCGC 541 Y+DESEVLT AD+ NHINKHNFRIPFVCGC Sbjct: 121 YVDESEVLTLADEDNHINKHNFRIPFVCGC 150
>tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 238 bits (607), Expect = 2e-61 Identities = 118/148 (79%), Positives = 132/148 (89%), Gaps = 6/148 (4%) Frame = +2
Query: 116 NGVVTVYGNGAIS------DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 277 +GVVTVYGN + PK S+++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGNNGAALLEPPKQPKSSTFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 278 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 457 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 458 DESEVLTPADDVNHINKHNFRIPFVCGC 541 DESEVLTPADD +HINKHNFR+PFVCGC Sbjct: 126 DESEVLTPADDAHHINKHNFRVPFVCGC 153
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 236 bits (601), Expect = 8e-61 Identities = 119/148 (80%), Positives = 133/148 (89%), Gaps = 6/148 (4%) Frame = +2
Query: 116 NGVVTVYG-NGA-----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 277 +GVVTVYG NGA PK ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGSNGAELLEPSKQPKSATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 278 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 457 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 458 DESEVLTPADDVNHINKHNFRIPFVCGC 541 DESEVLTPADD +HINKHNFR+PFVCGC Sbjct: 126 DESEVLTPADDAHHINKHNFRVPFVCGC 153
>tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 236 bits (601), Expect = 8e-61 Identities = 119/148 (80%), Positives = 133/148 (89%), Gaps = 6/148 (4%) Frame = +2
Query: 116 NGVVTVYG-NGA-----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 277 +GVVTVYG NGA PK ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 69 SGVVTVYGSNGAELLEPSKQPKSATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 128
Query: 278 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 457 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 129 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 188
Query: 458 DESEVLTPADDVNHINKHNFRIPFVCGC 541 DESEVLTPADD +HINKHNFR+PFVCGC Sbjct: 189 DESEVLTPADDAHHINKHNFRVPFVCGC 216
>tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subsp. japonica GN=Os11g0708500 PE=2 SV=1 Length = 363
Score = 233 bits (595), Expect = 4e-60 Identities = 115/145 (79%), Positives = 131/145 (90%), Gaps = 1/145 (0%) Frame = +2
Query: 110 ASNGVVTVYGNGAIS-DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMA 286 + +GVV +YG G +S P ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA AVMA Sbjct: 4 SDDGVVALYGGGKVSCKPPAATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACAVMA 63
Query: 287 LERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDES 466 LERVPADIRA+GGVARMSDP LI++IK AVTIPVMAKARIGHFVEAQ+LEAIGVDY+DES Sbjct: 64 LERVPADIRAQGGVARMSDPALIRDIKRAVTIPVMAKARIGHFVEAQILEAIGVDYVDES 123
Query: 467 EVLTPADDVNHINKHNFRIPFVCGC 541 EVLTPADD +HINKHNFR+PFVCGC Sbjct: 124 EVLTPADDAHHINKHNFRVPFVCGC 148
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