DK954023 |
Clone id |
TST39A01NGRL0019_F11 |
Library |
TST39 |
Length |
553 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_F11. 5' end sequence. |
Accession |
DK954023 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1810Contig1 |
Sequence |
CAGAGAGTCGGGATTCGGAGTTGAGACCAACAAAGAGCCCCGCCCCATTCCGTATACAGA AGTGGGCTTCTTATCTCCTGCCATACGCTCTTCTGAGCGCAGGTGGAGACACCCAAGATG GGTTTAATCAGGCTCGCTGTGGCTGATGCTGCCATAACATTCTTGTGGGTTGTATATATT GCATTCATGAGACCTACGACAGAGCTCATTGTTAGCACATTCAACCTTCAGGGATTCGAA TTTCACGTATCCATGGGTCTGCTGGCGCTCAACATCTTTTTCTTTAGCTGGCTGGGAGGT GCTCTTGGCGGTGCTTTATGGAATCCCACTGCCATCCTGGCACTCTACTCCATGGGAGTG AGTGGTGACTCTCTTTTCTCCCTAGCAGTCCGTTATCCAGCTCAGGCTGCTGGGGCTGTT GGAGGTGTGTTAGCCGCTAGAGAATTGGTACCACCCTCCCATAGAGAGAAAATTAGTGGG CCGCGCTTATTGGTGGATCTGAATAAAGGAATTCTTTCTGAACTGATTCTTACTTTCTTT AATTACTTTCTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ATM2 |
Definition |
sp|Q9ATM2|SIP12_MAIZE Aquaporin SIP1-2 OS=Zea mays |
Align length |
139 |
Score (bit) |
90.9 |
E-value |
4.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNF2 |
Definition |
tr|A9NNF2|A9NNF2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
146 |
Score (bit) |
103.0 |
E-value |
6.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954023|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_F11, 5' (553 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NNF2|A9NNF2_PICSI Putative uncharacterized protein OS=Picea... 103 6e-21 tr|A9U3Q2|A9U3Q2_PHYPA Predicted protein OS=Physcomitrella paten... 100 9e-20 tr|A9RDU1|A9RDU1_PHYPA Predicted protein OS=Physcomitrella paten... 94 4e-18 tr|B6TIZ3|B6TIZ3_MAIZE Aquaporin SIP1.1 OS=Zea mays PE=2 SV=1 91 4e-17 tr|Q107W9|Q107W9_VITVI Small basic intrinsic protein 1 (Putative... 86 1e-15 tr|B7EZ27|B7EZ27_ORYSJ cDNA clone:001-208-D07, full insert seque... 83 1e-14 tr|B6T891|B6T891_MAIZE Aquaporin SIP1.1 OS=Zea mays PE=2 SV=1 79 1e-13 tr|B5KGP0|B5KGP0_OLEEU Small basic intrinsic protein 1-2 OS=Olea... 75 2e-12 tr|B0L1W3|B0L1W3_OLEEU Small basic intrinsic protein 1.1 OS=Olea... 71 4e-11 tr|A5C3B1|A5C3B1_VITVI Putative uncharacterized protein (Fragmen... 63 1e-08 tr|A2XWG5|A2XWG5_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|A7PTG3|A7PTG3_VITVI Chromosome chr8 scaffold_29, whole genome... 45 0.002 tr|B7FN52|B7FN52_MEDTR Putative uncharacterized protein OS=Medic... 45 0.003 tr|A2XG31|A2XG31_ORYSI Putative uncharacterized protein OS=Oryza... 36 1.2 tr|Q81ZZ6|Q81ZZ6_NITEU Putative membrane-bound lytic murein tran... 35 2.0
>tr|A9NNF2|A9NNF2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 238
Score = 103 bits (257), Expect = 6e-21 Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 1/146 (0%) Frame = +1
Query: 118 MGLIRLAVADAAITFLWVVYIAFMRPTTELIVSTFNLQG-FEFHVSMGLLALNIFFFSWX 294 MG+++LA+ DAAITFLWV + + T +I S +QG ++ LL L +F FS+ Sbjct: 1 MGIVKLAIGDAAITFLWVFGASCLGAGTSIIASNLGVQGPMTLLITTSLLFLLVFLFSFL 60
Query: 295 XXXXXXXXWNPTAILALYSMGVSGDSLFSLAVRYPXXXXXXXXXXXXXRELVPPSHREKI 474 WNPTA A +++GV D+L S+++R+P EL+P S++ + Sbjct: 61 GQVMGGATWNPTASAAAFALGVGNDNLISMSIRFPAQAAGAVGGALAIMELMPASYKHML 120
Query: 475 SGPRLLVDLNKGILSELILTFFNYFL 552 GP L VDL++G ++E +LTF F+ Sbjct: 121 GGPSLKVDLHRGAIAEGVLTFLISFM 146
>tr|A9U3Q2|A9U3Q2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_200882 PE=3 SV=1 Length = 279
Score = 99.8 bits (247), Expect = 9e-20 Identities = 55/143 (38%), Positives = 78/143 (54%), Gaps = 3/143 (2%) Frame = +1
Query: 118 MGLIRLAVADAAITFLWVVYIAFMRPTTELIVSTFNLQG---FEFHVSMGLLALNIFFFS 288 MGL R AVADA+ITFLWV +A + + I S+ L G + ++ L++ +FFFS Sbjct: 1 MGLARKAVADASITFLWVFAMASLGAASTAIASSLGLDGPGKTKMYIVFALVSFLVFFFS 60
Query: 289 WXXXXXXXXXWNPTAILALYSMGVSGDSLFSLAVRYPXXXXXXXXXXXXXRELVPPSHRE 468 + WNPTAI+A GVS D LF+L VR P E++P ++ Sbjct: 61 FLGHALGGASWNPTAIVAFSYAGVSNDDLFTLGVRLPAQMVGAVGGALAILEVMPKKYKH 120
Query: 469 KISGPRLLVDLNKGILSELILTF 537 + GP+L V L G+++E ILTF Sbjct: 121 MLGGPKLKVPLQTGVIAEAILTF 143
>tr|A9RDU1|A9RDU1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_112053 PE=3 SV=1 Length = 277
Score = 94.4 bits (233), Expect = 4e-18 Identities = 54/143 (37%), Positives = 75/143 (52%), Gaps = 3/143 (2%) Frame = +1
Query: 118 MGLIRLAVADAAITFLWVVYIAFMRPTTELIVSTFNLQG---FEFHVSMGLLALNIFFFS 288 MGL R AVADA+ITFLWV +A + + I + L G + ++ L++ IFFFS Sbjct: 1 MGLARKAVADASITFLWVFAMASLGAVSTSIAPSLGLDGPGKGKMYIVFSLVSFLIFFFS 60
Query: 289 WXXXXXXXXXWNPTAILALYSMGVSGDSLFSLAVRYPXXXXXXXXXXXXXRELVPPSHRE 468 + WNPT I+A GVS D LF+L VR P E++P ++ Sbjct: 61 FLGQALGGASWNPTTIVAFSFAGVSNDDLFTLGVRLPAQMVGAVGGALTIWEVMPKKYKH 120
Query: 469 KISGPRLLVDLNKGILSELILTF 537 + GP+L V L G+ +E ILTF Sbjct: 121 TLGGPKLKVPLETGVAAETILTF 143
>tr|B6TIZ3|B6TIZ3_MAIZE Aquaporin SIP1.1 OS=Zea mays PE=2 SV=1 Length = 243
Score = 90.9 bits (224), Expect = 4e-17 Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 2/139 (1%) Frame = +1
Query: 127 IRLAVADAAITFLWVVYIAFMRPTTELIVSTFNLQGFEFH--VSMGLLALNIFFFSWXXX 300 +R A ADA +TFLWV+ ++ + +T + S LQG F V++ LL++ +F F+ Sbjct: 7 LRAAAADAVVTFLWVLCVSTLGASTTAVTSYLRLQGVHFALLVTVSLLSVLLFVFNILCD 66
Query: 301 XXXXXXWNPTAILALYSMGVSGDSLFSLAVRYPXXXXXXXXXXXXXRELVPPSHREKISG 480 +NPT + A Y+ GV+ SLFS+A+R P EL+P +R + G Sbjct: 67 ALGGASFNPTGVAAFYAAGVTSPSLFSIALRLPAQAAGAVGGALAISELMPAQYRHMLGG 126
Query: 481 PRLLVDLNKGILSELILTF 537 P L VD + G +EL+LTF Sbjct: 127 PSLKVDPHTGAGAELVLTF 145
>tr|Q107W9|Q107W9_VITVI Small basic intrinsic protein 1 (Putative uncharacterized protein) OS=Vitis vinifera GN=VITISV_037967 PE=2 SV=1 Length = 238
Score = 86.3 bits (212), Expect = 1e-15 Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 3/148 (2%) Frame = +1
Query: 118 MGLIRLAVADAAITFLWVVYIAFMRPTTELIVSTFNLQGFEF---HVSMGLLALNIFFFS 288 MG+I+ A+ D +TF+WV ++ + T LI S +Q ++ L+ + +F FS Sbjct: 1 MGVIKAAIGDGVLTFMWVFCVSTVGIFTSLISSALGVQALPLAAIFITTVLIFVLVFVFS 60
Query: 289 WXXXXXXXXXWNPTAILALYSMGVSGDSLFSLAVRYPXXXXXXXXXXXXXRELVPPSHRE 468 +NPTA ALY+ GV+ DSL S+A R+P E++P ++ Sbjct: 61 AIGDVLGGASFNPTATAALYAAGVTPDSLISMAFRFPAQAAGAVGGALAIMEVMPTQYKH 120
Query: 469 KISGPRLLVDLNKGILSELILTFFNYFL 552 + GP L VDL+ G ++E ILTF FL Sbjct: 121 MLGGPSLKVDLHTGAIAEGILTFTISFL 148
>tr|B7EZ27|B7EZ27_ORYSJ cDNA clone:001-208-D07, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 246
Score = 82.8 bits (203), Expect = 1e-14 Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 6/143 (4%) Frame = +1
Query: 127 IRLAVADAAITFLWVVYIAFMRPTTELIVSTFNL-QGFEFH--VSMGLLALNIFFFSWXX 297 +R A ADAA+TFLWV+ ++ + +T + S + +G + V++ LL++ +F F+ Sbjct: 6 VRAAAADAAVTFLWVLCVSTLGASTAAVTSYLRIHEGIHYALLVTVSLLSVLLFAFNLLC 65
Query: 298 XXXXXXXWNPTAILALYSMGVSG---DSLFSLAVRYPXXXXXXXXXXXXXRELVPPSHRE 468 +NPTA+ A ++ G+S SLF LA+R+P EL+P ++ Sbjct: 66 DALGGASFNPTALAAFHAAGLSSPRHSSLFPLALRFPAQAAGAVGGAMAISELMPEQYKH 125
Query: 469 KISGPRLLVDLNKGILSELILTF 537 + GP L VDL+ G +EL+LTF Sbjct: 126 MLGGPSLKVDLHTGAAAELVLTF 148
>tr|B6T891|B6T891_MAIZE Aquaporin SIP1.1 OS=Zea mays PE=2 SV=1 Length = 245
Score = 79.3 bits (194), Expect = 1e-13 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 4/141 (2%) Frame = +1
Query: 127 IRLAVADAAITFLWVVYIAFMRPTTELIVSTFNLQGFEFH----VSMGLLALNIFFFSWX 294 +R A ADA +TFLWV+ + + +T + S +Q H V+ LL++ +F F Sbjct: 7 VRAAAADAVVTFLWVLCASALGASTAAVTSYLGVQESAGHYALLVTTSLLSVLLFTFDLL 66
Query: 295 XXXXXXXXWNPTAILALYSMGVSGDSLFSLAVRYPXXXXXXXXXXXXXRELVPPSHREKI 474 +NPT A Y+ G+ SLFS+A+R+P EL+P ++ + Sbjct: 67 CGALGGASFNPTDFAASYAAGLDSPSLFSVALRFPAQAAGAVGGALAISELMPAQYKHTL 126
Query: 475 SGPRLLVDLNKGILSELILTF 537 +GP L VD + G L+E +LTF Sbjct: 127 AGPSLKVDPHTGALAEGVLTF 147
>tr|B5KGP0|B5KGP0_OLEEU Small basic intrinsic protein 1-2 OS=Olea europaea PE=2 SV=1 Length = 241
Score = 75.5 bits (184), Expect = 2e-12 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%) Frame = +1
Query: 118 MGLIRLAVADAAITFLWVVYIAFMRPTTELIVSTFNL-QGFE-FHVSMGLLALNIFFFSW 291 MG I+ AVAD +TF+WV + + T ++ S + QG ++ L+ L + F Sbjct: 1 MGAIKAAVADGVLTFMWVFCTSTLGALTFVVASALGVSQGLPTLFITTVLVFLLLILFGI 60
Query: 292 XXXXXXXXXWNPTAILALYSMGVSG-DSLFSLAVRYPXXXXXXXXXXXXXRELVPPSHRE 468 +NPTA+ A Y+ G+ G DSL S A+R+P E++P ++ Sbjct: 61 IGDVLGGATFNPTALAAFYAAGIGGADSLVSAALRFPAQAAGAVGGALAIMEVMPMQYKH 120
Query: 469 KISGPRLLVDLNKGILSELILTF 537 + GP L VDL+ G ++E +LTF Sbjct: 121 MLGGPSLKVDLHTGAIAEGVLTF 143
>tr|B0L1W3|B0L1W3_OLEEU Small basic intrinsic protein 1.1 OS=Olea europaea PE=2 SV=1 Length = 240
Score = 70.9 bits (172), Expect = 4e-11 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%) Frame = +1
Query: 118 MGLIRLAVADAAITFLWVVYIAFMRPTTELIVSTFNL-QGFEFH-VSMGLLALNIFFFSW 291 M I++A+ADA +T LWV + + T ++ S F + QG ++ LL + +F F + Sbjct: 1 MRAIKVAIADAIVTCLWVFCASSLGALTFVVASAFGVSQGLPMLLITTFLLFVLLFIFGF 60
Query: 292 XXXXXXXXXWNPTAILALYSMGVSG-DSLFSLAVRYPXXXXXXXXXXXXXRELVPPSHRE 468 +NPT A Y+ GV G +SL + AVR+P E++P ++ Sbjct: 61 IGDALGGATFNPTGPAAFYAAGVGGTESLVTAAVRFPAQAAGAVGGALGILEVMPVQYKH 120
Query: 469 KISGPRLLVDLNKGILSELILTF 537 + P L VDLN G ++E +LTF Sbjct: 121 MLDCPSLKVDLNTGAIAEGVLTF 143
>tr|A5C3B1|A5C3B1_VITVI Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_038971 PE=3 SV=1 Length = 221
Score = 62.8 bits (151), Expect = 1e-08 Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 3/132 (2%) Frame = +1
Query: 166 WVVYIAFMRPTTELIVSTFNLQGFEF---HVSMGLLALNIFFFSWXXXXXXXXXWNPTAI 336 WV I+ M T LI S + ++ L+ + +F FS +NP A Sbjct: 1 WVFCISTMGIFTYLISSALGVLALPLATIFITTVLIFVLVFVFSMIGDALGGASFNPIAT 60
Query: 337 LALYSMGVSGDSLFSLAVRYPXXXXXXXXXXXXXRELVPPSHREKISGPRLLVDLNKGIL 516 ALY+ V+ DSL S+A R+P E++P +R + GP L VDL+ G + Sbjct: 61 AALYAADVTPDSLISMAFRFPAQVAGAGGGTLAIMEVMPTQYRLMLGGPSLKVDLHTGAI 120
Query: 517 SELILTFFNYFL 552 +E +LTF FL Sbjct: 121 AEGVLTFTISFL 132
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