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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK954086
Clone id TST39A01NGRL0019_I02
Library
Length 504
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_I02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGATAATGAACAGTCCAGATGCTTCCGGCTGGAGGTCGATCTGGCTGAACTACGACAGAA
GCTGCATTCTATGGAGGCCTTACAGAAGGAGTTGGAGTTATTGCGCCGACAAAAAGCTGC
AGCAGATCAAGTAGCGGCTTCTGCAGTGCAAAAGCAATCGTCCGGAGGTGTTTGGGGCTG
GTTAGCTGGAGCTCCTCCCAATGGAAAGACGGTGGAAACTTGAATCTTTTCTAAAGTGAT
GCTGAAATTTGCTAACAAGCTTTCTTTTCAAGAGTACTGTAATTAAGGTTCCTTCGATCT
TTGATCTCATCAGTAACTTGACTGAATCTTTGGGATTCTTAGGTTCAGTTGATTCTTTCT
TTACGGACATGTACCTTTGTGTGAGGTATAGAATGGTCAATTTGTTTTTTGAGATACAGG
TATAAATTTTTATTATTTGAATGTGACTGCCAGAAAACACATTGGATTCCAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P57495
Definition sp|P57495|ISPD_BUCAI 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
Align length 45
Score (bit) 34.3
E-value 0.28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954086|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_I02, 5'
         (470 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P57495|ISPD_BUCAI 2-C-methyl-D-erythritol 4-phosphate cytidyl...    34   0.28 
sp|P16947|M49_STRP9 M protein, serotype 49 OS=Streptococcus pyog...    30   6.9  
sp|P50468|M21_STRPY M protein, serotype 2.1 OS=Streptococcus pyo...    30   6.9  
sp|P13050|ARP4_STRPY IgA receptor OS=Streptococcus pyogenes GN=a...    30   6.9  
sp|Q7TMK6|HOOK2_MOUSE Protein Hook homolog 2 OS=Mus musculus GN=...    29   9.1  

>sp|P57495|ISPD_BUCAI 2-C-methyl-D-erythritol 4-phosphate
           cytidylyltransferase OS=Buchnera aphidicola subsp.
           Acyrthosiphon pisum GN=ispD PE=3 SV=1
          Length = 237

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = -2

Query: 334 PKDSVKLLMRSKIEGTLITVLLKRKLVSKFQHHFRKDSSFHRLSI 200
           PK  +K+  R+ +E TL T+LL   +V       +KD+ FH+LSI
Sbjct: 29  PKQYIKIQNRTILEHTLTTLLLHPNIVQIIVSLNKKDNYFHKLSI 73


>sp|P16947|M49_STRP9 M protein, serotype 49 OS=Streptococcus
           pyogenes serotype M49 GN=emm49 PE=1 SV=1
          Length = 389

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 26  RLEVDLAELRQKLHSMEALQKELE 97
           ++E DLAE   KL ++E L KELE
Sbjct: 267 KVEADLAEANSKLQALEKLNKELE 290


>sp|P50468|M21_STRPY M protein, serotype 2.1 OS=Streptococcus
           pyogenes GN=emmL2.1 PE=3 SV=1
          Length = 407

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 26  RLEVDLAELRQKLHSMEALQKELE 97
           ++E DLAE   KL ++E L KELE
Sbjct: 285 KVEADLAEANSKLQALEKLNKELE 308


>sp|P13050|ARP4_STRPY IgA receptor OS=Streptococcus pyogenes GN=arp4
           PE=1 SV=1
          Length = 386

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +2

Query: 26  RLEVDLAELRQKLHSMEALQKELE 97
           ++E DLAE   KL ++E L KELE
Sbjct: 264 KVEADLAEANSKLQALEKLNKELE 287


>sp|Q7TMK6|HOOK2_MOUSE Protein Hook homolog 2 OS=Mus musculus
           GN=Hook2 PE=1 SV=2
          Length = 716

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 11/35 (31%), Positives = 25/35 (71%)
 Frame = +2

Query: 2   DNEQSRCFRLEVDLAELRQKLHSMEALQKELELLR 106
           ++++ RC  LE ++AEL+Q+  ++ +L +E + L+
Sbjct: 260 EDDRLRCLELEREVAELQQRNQALTSLSQEAQALK 294
tr_hit_id B6U8G5
Definition tr|B6U8G5|B6U8G5_MAIZE Acyl-CoA binding protein OS=Zea mays
Align length 65
Score (bit) 80.1
E-value 5.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954086|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_I02, 5'
         (470 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6U8G5|B6U8G5_MAIZE Acyl-CoA binding protein OS=Zea mays PE=2...    80   5e-14
tr|Q75LJ4|Q75LJ4_ORYSJ Putative transcription factor (Acyl-CoA b...    75   2e-12
tr|Q10B01|Q10B01_ORYSJ Os03g0835600 protein OS=Oryza sativa subs...    75   2e-12
tr|B8AMT5|B8AMT5_ORYSI Putative uncharacterized protein OS=Oryza...    75   2e-12
tr|A3APG6|A3APG6_ORYSJ Putative uncharacterized protein OS=Oryza...    75   2e-12
tr|A9SDH0|A9SDH0_PHYPA Predicted protein OS=Physcomitrella paten...    74   4e-12
tr|A9S4U6|A9S4U6_PHYPA Predicted protein OS=Physcomitrella paten...    74   4e-12
tr|Q8RWD9|Q8RWD9_ARATH Putative uncharacterized protein At5g2763...    74   5e-12
tr|Q9MA55|Q9MA55_ARATH F22F7.13 protein (Putative uncharacterize...    72   1e-11
tr|Q3E7F2|Q3E7F2_ARATH Uncharacterized protein At3g05420.2 OS=Ar...    72   1e-11
tr|A7PS35|A7PS35_VITVI Chromosome chr14 scaffold_27, whole genom...    72   2e-11
tr|A2Q340|A2Q340_MEDTR Acyl-coA-binding protein, ACBP; Serine/th...    68   2e-10
tr|A7PHW0|A7PHW0_VITVI Chromosome chr13 scaffold_17, whole genom...    48   2e-04
tr|Q9LZ83|Q9LZ83_ARATH Putative uncharacterized protein T32M21_2...    45   0.002
tr|Q945N7|Q945N7_ARATH AT5g04420/T32M21_20 OS=Arabidopsis thalia...    45   0.002
tr|Q6K9X9|Q6K9X9_ORYSJ Os02g0822800 protein OS=Oryza sativa subs...    41   0.034
tr|A3ACT8|A3ACT8_ORYSJ Putative uncharacterized protein OS=Oryza...    41   0.034
tr|A2XB60|A2XB60_ORYSI Putative uncharacterized protein OS=Oryza...    41   0.034
tr|B6TU45|B6TU45_MAIZE Putative uncharacterized protein OS=Zea m...    39   0.100
tr|B8D9J8|B8D9J8_BUCAI 2-C-methyl-D-erythritol 4-phosphate cytid...    34   3.2  
tr|B8D7V0|B8D7V0_BUCAI 2-C-methyl-D-erythritol 4-phosphate cytid...    34   3.2  
tr|Q38JW4|Q38JW4_XIPMA Hel OS=Xiphophorus maculatus GN=Hel PE=4 ...    34   4.2  
tr|A0BS91|A0BS91_PARTE Chromosome undetermined scaffold_124, who...    33   5.5  

>tr|B6U8G5|B6U8G5_MAIZE Acyl-CoA binding protein OS=Zea mays PE=2
           SV=1
          Length = 659

 Score = 80.1 bits (196), Expect = 5e-14
 Identities = 38/65 (58%), Positives = 46/65 (70%)
 Frame = +2

Query: 5   NEQSRCFRLEVDLAELRQKLHSMEALQKELELLRRXXXXXXXXXXXXXXXXXXGGVWGWL 184
           +EQSRCF+LEVD+AELRQKL SM+AL+KE+ELLRR                  GG+WGWL
Sbjct: 592 SEQSRCFKLEVDVAELRQKLQSMDALEKEVELLRRQKPASEQAALDAKQRQGSGGMWGWL 651

Query: 185 AGAPP 199
           AG+PP
Sbjct: 652 AGSPP 656


>tr|Q75LJ4|Q75LJ4_ORYSJ Putative transcription factor (Acyl-CoA
           binding family protein, putative, expressed) OS=Oryza
           sativa subsp. japonica GN=OSJNBa0096I06.14 PE=4 SV=1
          Length = 656

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = +2

Query: 8   EQSRCFRLEVDLAELRQKLHSMEALQKELELLRRXXXXXXXXXXXXXXXXXXGGVWGWLA 187
           EQSRCF+LEVD+AELRQKL SM+AL++E+ELLRR                   G+WGWL 
Sbjct: 588 EQSRCFKLEVDVAELRQKLQSMDALEREVELLRRQKAASEQAALEAKQRQSSSGMWGWLV 647

Query: 188 GAPPN 202
           G PP+
Sbjct: 648 GTPPD 652


>tr|Q10B01|Q10B01_ORYSJ Os03g0835600 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0835600 PE=4 SV=1
          Length = 655

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = +2

Query: 8   EQSRCFRLEVDLAELRQKLHSMEALQKELELLRRXXXXXXXXXXXXXXXXXXGGVWGWLA 187
           EQSRCF+LEVD+AELRQKL SM+AL++E+ELLRR                   G+WGWL 
Sbjct: 587 EQSRCFKLEVDVAELRQKLQSMDALEREVELLRRQKAASEQAALEAKQRQSSSGMWGWLV 646

Query: 188 GAPPN 202
           G PP+
Sbjct: 647 GTPPD 651


>tr|B8AMT5|B8AMT5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_14214 PE=4 SV=1
          Length = 618

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = +2

Query: 8   EQSRCFRLEVDLAELRQKLHSMEALQKELELLRRXXXXXXXXXXXXXXXXXXGGVWGWLA 187
           EQSRCF+LEVD+AELRQKL SM+AL++E+ELLRR                   G+WGWL 
Sbjct: 550 EQSRCFKLEVDVAELRQKLQSMDALEREVELLRRQKAASEQAALEAKQRQSSSGMWGWLV 609

Query: 188 GAPPN 202
           G PP+
Sbjct: 610 GTPPD 614


>tr|A3APG6|A3APG6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_012688 PE=4 SV=1
          Length = 676

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = +2

Query: 8   EQSRCFRLEVDLAELRQKLHSMEALQKELELLRRXXXXXXXXXXXXXXXXXXGGVWGWLA 187
           EQSRCF+LEVD+AELRQKL SM+AL++E+ELLRR                   G+WGWL 
Sbjct: 608 EQSRCFKLEVDVAELRQKLQSMDALEREVELLRRQKAASEQAALEAKQRQSSSGMWGWLV 667

Query: 188 GAPPN 202
           G PP+
Sbjct: 668 GTPPD 672


>tr|A9SDH0|A9SDH0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_106259 PE=4 SV=1
          Length = 682

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 39/64 (60%), Positives = 42/64 (65%)
 Frame = +2

Query: 8   EQSRCFRLEVDLAELRQKLHSMEALQKELELLRRXXXXXXXXXXXXXXXXXXGGVWGWLA 187
           EQSR FRLEV++AELRQKL SMEALQKEL+LL R                   GVWGWLA
Sbjct: 614 EQSRSFRLEVEIAELRQKLLSMEALQKELDLLHRQMAVSERAANEASQKDSKVGVWGWLA 673

Query: 188 GAPP 199
           GAPP
Sbjct: 674 GAPP 677


>tr|A9S4U6|A9S4U6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124204 PE=4 SV=1
          Length = 631

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 37/64 (57%), Positives = 43/64 (67%)
 Frame = +2

Query: 8   EQSRCFRLEVDLAELRQKLHSMEALQKELELLRRXXXXXXXXXXXXXXXXXXGGVWGWLA 187
           EQSR FRLEV++AEL+QKL SM+ALQKEL+LL+R                   GVWGWLA
Sbjct: 563 EQSRSFRLEVEIAELKQKLSSMDALQKELDLLQRQIPTSHKVASEAAQKESKSGVWGWLA 622

Query: 188 GAPP 199
           GAPP
Sbjct: 623 GAPP 626


>tr|Q8RWD9|Q8RWD9_ARATH Putative uncharacterized protein At5g27630
           (At5g27630) OS=Arabidopsis thaliana GN=At5g27630 PE=2
           SV=1
          Length = 648

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 38/65 (58%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = +2

Query: 8   EQSRCFRLEVDLAELRQKLHSMEALQKELELL-RRXXXXXXXXXXXXXXXXXXGGVWGWL 184
           EQSRCF+LEV++AELRQKL +ME LQKELELL R+                  GGVWGWL
Sbjct: 581 EQSRCFKLEVEVAELRQKLQTMETLQKELELLQRQRAVASEQAATMNAKRQSSGGVWGWL 640

Query: 185 AGAPP 199
           AG PP
Sbjct: 641 AGTPP 645


>tr|Q9MA55|Q9MA55_ARATH F22F7.13 protein (Putative uncharacterized
           protein At3g05420) (At3g05420) OS=Arabidopsis thaliana
           GN=At3g05420 PE=2 SV=1
          Length = 668

 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 37/63 (58%), Positives = 43/63 (68%)
 Frame = +2

Query: 8   EQSRCFRLEVDLAELRQKLHSMEALQKELELLRRXXXXXXXXXXXXXXXXXXGGVWGWLA 187
           EQSRCF+LEVD+AELRQKL ++E LQKELELL+R                  GGVWGWLA
Sbjct: 599 EQSRCFKLEVDVAELRQKLQTLETLQKELELLQR-QKAASEQAAMNAKRQGSGGVWGWLA 657

Query: 188 GAP 196
           G+P
Sbjct: 658 GSP 660


>tr|Q3E7F2|Q3E7F2_ARATH Uncharacterized protein At3g05420.2
           OS=Arabidopsis thaliana GN=At3g05420 PE=4 SV=1
          Length = 669

 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 37/63 (58%), Positives = 43/63 (68%)
 Frame = +2

Query: 8   EQSRCFRLEVDLAELRQKLHSMEALQKELELLRRXXXXXXXXXXXXXXXXXXGGVWGWLA 187
           EQSRCF+LEVD+AELRQKL ++E LQKELELL+R                  GGVWGWLA
Sbjct: 600 EQSRCFKLEVDVAELRQKLQTLETLQKELELLQR-QKAASEQAAMNAKRQGSGGVWGWLA 658

Query: 188 GAP 196
           G+P
Sbjct: 659 GSP 661