DK954096 |
Clone id |
TST39A01NGRL0019_I12 |
Library |
TST39 |
Length |
635 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_I12. 5' end sequence. |
Accession |
DK954096 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3182Contig1 |
Sequence |
CTCACCGATCGATAGAGAGAGGAAGCAAGCATCGCTGGCGAACTAGTTACGTTTCATTGC TGAAGCAGAAGCCCTCTTTGAAGTGCAGAGAGCGACAGAGGGAGCAAGAGAGGGAGACAG AGATCTGCGTGTGTGCTTCGTCATGGCCGCGCTTCAGTATTTGGAGACACAGCGGGAGGC TCAGCCAGAGCTCGCAGAATGGTACACTTCTCTCGCCGATCTCTATCAGCGCAAGCTCTG GCATCAGCTGACTCTCAAGCTTGAACAATTTGTCGGCCTTCCTGTCTTCCAAGGGGGTGA TGCACTCATTCAGCTTTACCGCAATTTTATATCCGAGTTTGAAAGCAAAATCAACCACTT GAAGCTTGCACATTTTGCTGTCATTGTATCACGCCAATATACTGATGTAGAGGTTGCAAT TAGTTATCTTTCTGAAGTGATAGAGAAGCTGCGTGCATCTCAGCAGAGAAGAATTGAAGA GCCTGTGTTGTATTTGAATATGAGAATAGCTGCTCTTAAACTGGAGCAAGGAGAACAAAA GGAGTGCAAAAGACTACTTGAGGAGGGAAAATCTACTCTTGACAGCATGACAGATGTAGA TCCCTCTGTCCATGCAAGTTTCCATTGGGTGTCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P84169 |
Definition |
sp|P84169|PSD13_CHICK 26S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus |
Align length |
159 |
Score (bit) |
109.0 |
E-value |
1.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SX33 |
Definition |
tr|A9SX33|A9SX33_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
164 |
Score (bit) |
256.0 |
E-value |
1.0e-66 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954096|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_I12, 5' (635 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SX33|A9SX33_PHYPA Predicted protein OS=Physcomitrella paten... 256 1e-66 tr|A9SCR8|A9SCR8_PHYPA Predicted protein OS=Physcomitrella paten... 253 7e-66 tr|Q8GYA6|Q8GYA6_ARATH Putative uncharacterized protein At4g1900... 244 2e-63 tr|Q9FK79|Q9FK79_ARATH 26S proteasome subunit-like protein OS=Ar... 243 9e-63 tr|Q8RWF0|Q8RWF0_ARATH 26S proteasome subunit-like protein (26S ... 243 9e-63 tr|Q3E8G4|Q3E8G4_ARATH Uncharacterized protein At5g45620.2 OS=Ar... 243 9e-63 tr|Q94E72|Q94E72_ORYSJ Putative 26S proteasome subunit RPN9b (Pu... 236 9e-61 tr|A2WQL6|A2WQL6_ORYSI Putative uncharacterized protein OS=Oryza... 236 9e-61 tr|B8AQT0|B8AQT0_ORYSI Putative uncharacterized protein OS=Oryza... 233 7e-60 tr|B4FTW8|B4FTW8_MAIZE Putative uncharacterized protein OS=Zea m... 231 3e-59 tr|B4FQ29|B4FQ29_MAIZE 26S proteasome non-ATPase regulatory subu... 231 3e-59 tr|Q10Q05|Q10Q05_ORYSJ Os03g0214600 protein OS=Oryza sativa subs... 231 4e-59 tr|A3AFG6|A3AFG6_ORYSJ Putative uncharacterized protein OS=Oryza... 231 4e-59 tr|B6UAD0|B6UAD0_MAIZE 26S proteasome non-ATPase regulatory subu... 229 8e-59 tr|B6THY8|B6THY8_MAIZE 26S proteasome non-ATPase regulatory subu... 229 1e-58 tr|B6TA88|B6TA88_MAIZE 26S proteasome non-ATPase regulatory subu... 229 1e-58 tr|Q076B1|Q076B1_NICBE RPN9 (Fragment) OS=Nicotiana benthamiana ... 206 1e-51 tr|A7PBY8|A7PBY8_VITVI Chromosome chr2 scaffold_11, whole genome... 184 4e-45 tr|A8IW48|A8IW48_CHLRE 26S proteasome regulatory subunit OS=Chla... 123 1e-26 tr|B5DGU8|B5DGU8_SALSA Proteasome (Prosome, macropain) 26S subun... 116 1e-24 tr|Q7ZU69|Q7ZU69_DANRE Proteasome (Prosome, macropain) 26S subun... 112 1e-23 tr|Q6TGV4|Q6TGV4_DANRE Proteasome 26S subunit, non-ATPase, 13 OS... 112 1e-23 tr|B5DGU7|B5DGU7_SALSA Proteasome (Prosome, macropain) 26S subun... 112 1e-23 tr|A8WGP1|A8WGP1_DANRE Proteasome (Prosome, macropain) 26S subun... 112 2e-23 tr|B2RT97|B2RT97_MOUSE Proteasome (Prosome, macropain) 26S subun... 107 6e-22 tr|B0BN93|B0BN93_RAT Proteasome (Prosome, macropain) 26S subunit... 107 6e-22 tr|Q9Y6E3|Q9Y6E3_HUMAN HSPC027 OS=Homo sapiens PE=2 SV=1 106 1e-21 tr|Q66IX2|Q66IX2_XENLA MGC84231 protein OS=Xenopus laevis GN=psm... 105 2e-21 tr|Q53XU2|Q53XU2_HUMAN Proteasome (Prosome, macropain) 26S subun... 105 2e-21 tr|Q6GLI4|Q6GLI4_XENTR Proteasome (Prosome, macropain) 26S subun... 105 2e-21
>tr|A9SX33|A9SX33_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189316 PE=4 SV=1 Length = 386
Score = 256 bits (653), Expect = 1e-66 Identities = 123/164 (75%), Positives = 144/164 (87%) Frame = +2
Query: 143 MAALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYR 322 MAALQYLE QR AQPELAEWYTS+ADLYQRKLWHQLT KL+QFV L VFQ GD L+QLY Sbjct: 1 MAALQYLEKQRAAQPELAEWYTSMADLYQRKLWHQLTQKLDQFVALTVFQAGDTLVQLYH 60
Query: 323 NFISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNM 502 NFI +FE+KIN LKLAHFAVIVS+QY + + AI+YL EVIEKLR S +RR+EEP+LY+ M Sbjct: 61 NFIRDFETKINLLKLAHFAVIVSKQYPEKDAAIAYLEEVIEKLRTSGERRVEEPILYVKM 120
Query: 503 RIAALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVS 634 ++AA+KL++GE + CK+LLEEGK+TLDSMTDVDPSVHAS HWVS Sbjct: 121 QVAAMKLQRGEIQVCKKLLEEGKTTLDSMTDVDPSVHASVHWVS 164
>tr|A9SCR8|A9SCR8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_210905 PE=4 SV=1 Length = 386
Score = 253 bits (646), Expect = 7e-66 Identities = 121/164 (73%), Positives = 143/164 (87%) Frame = +2
Query: 143 MAALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYR 322 MAALQYLE QR AQPELAEWY S+ADLYQRKLWHQLT KL+QFV L VFQ GD L+QLY Sbjct: 1 MAALQYLEKQRAAQPELAEWYASMADLYQRKLWHQLTQKLDQFVALTVFQAGDTLVQLYH 60
Query: 323 NFISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNM 502 NFI +FE+KIN LKLAHFAVIVS+QY + A++YL EVIEKLR S +RR++EP+LY+ M Sbjct: 61 NFIRDFETKINLLKLAHFAVIVSKQYPEKGAAVAYLEEVIEKLRTSGERRVDEPILYVKM 120
Query: 503 RIAALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVS 634 ++AALKL++GE +ECK+LLEEG++TLDSMTDVDPSVHAS HWVS Sbjct: 121 QVAALKLQRGEIQECKKLLEEGRTTLDSMTDVDPSVHASVHWVS 164
>tr|Q8GYA6|Q8GYA6_ARATH Putative uncharacterized protein At4g19006 (26S proteasome subunit RPN9b) OS=Arabidopsis thaliana GN=RPN9b PE=2 SV=1 Length = 386
Score = 244 bits (624), Expect = 2e-63 Identities = 115/164 (70%), Positives = 141/164 (85%) Frame = +2
Query: 143 MAALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYR 322 MAALQYLE+Q+ A PEL EWY SLADLYQ+KLWHQLTLKLEQF+ L VFQ GDALIQLY Sbjct: 1 MAALQYLESQKNAHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALSVFQAGDALIQLYN 60
Query: 323 NFISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNM 502 NFI++FE++IN LKLAHFAV+VSRQY + E A+SYL VIEKL+A+++ RI EP+ Y+ Sbjct: 61 NFITDFETRINLLKLAHFAVVVSRQYPEKEAAVSYLEGVIEKLKATKESRINEPISYIET 120
Query: 503 RIAALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVS 634 +IA KLEQG+QKECK++L++GKS LDSMTD+DPSV+A+F WVS Sbjct: 121 QIALFKLEQGDQKECKKILDDGKSLLDSMTDIDPSVYANFFWVS 164
>tr|Q9FK79|Q9FK79_ARATH 26S proteasome subunit-like protein OS=Arabidopsis thaliana PE=4 SV=1 Length = 375
Score = 243 bits (619), Expect = 9e-63 Identities = 113/164 (68%), Positives = 141/164 (85%) Frame = +2
Query: 143 MAALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYR 322 MAALQYLE+ + PEL EWY SLADLYQ+KLWHQLTLKLEQF+ L VFQ GDALIQ Y Sbjct: 1 MAALQYLESLKNTHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYH 60
Query: 323 NFISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNM 502 NFI++FE+KIN LKLAHFAV+VSRQY++ E A+SYL VIEKLRA+++ RI EP++Y+ Sbjct: 61 NFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIET 120
Query: 503 RIAALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVS 634 + A KLEQG+QKECK++L++GKS+LDSMTD+DPSV+A+F+WVS Sbjct: 121 QKALFKLEQGDQKECKKILDDGKSSLDSMTDIDPSVYANFYWVS 164
>tr|Q8RWF0|Q8RWF0_ARATH 26S proteasome subunit-like protein (26S proteasome subunit RPN9a) OS=Arabidopsis thaliana GN=RPN9a PE=2 SV=1 Length = 386
Score = 243 bits (619), Expect = 9e-63 Identities = 113/164 (68%), Positives = 141/164 (85%) Frame = +2
Query: 143 MAALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYR 322 MAALQYLE+ + PEL EWY SLADLYQ+KLWHQLTLKLEQF+ L VFQ GDALIQ Y Sbjct: 1 MAALQYLESLKNTHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYH 60
Query: 323 NFISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNM 502 NFI++FE+KIN LKLAHFAV+VSRQY++ E A+SYL VIEKLRA+++ RI EP++Y+ Sbjct: 61 NFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIET 120
Query: 503 RIAALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVS 634 + A KLEQG+QKECK++L++GKS+LDSMTD+DPSV+A+F+WVS Sbjct: 121 QKALFKLEQGDQKECKKILDDGKSSLDSMTDIDPSVYANFYWVS 164
>tr|Q3E8G4|Q3E8G4_ARATH Uncharacterized protein At5g45620.2 OS=Arabidopsis thaliana GN=At5g45620 PE=4 SV=1 Length = 350
Score = 243 bits (619), Expect = 9e-63 Identities = 113/164 (68%), Positives = 141/164 (85%) Frame = +2
Query: 143 MAALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYR 322 MAALQYLE+ + PEL EWY SLADLYQ+KLWHQLTLKLEQF+ L VFQ GDALIQ Y Sbjct: 1 MAALQYLESLKNTHPELGEWYNSLADLYQKKLWHQLTLKLEQFIALAVFQAGDALIQFYH 60
Query: 323 NFISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNM 502 NFI++FE+KIN LKLAHFAV+VSRQY++ E A+SYL VIEKLRA+++ RI EP++Y+ Sbjct: 61 NFITDFETKINLLKLAHFAVVVSRQYSEKEAAVSYLESVIEKLRATKEPRITEPIIYIET 120
Query: 503 RIAALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVS 634 + A KLEQG+QKECK++L++GKS+LDSMTD+DPSV+A+F+WVS Sbjct: 121 QKALFKLEQGDQKECKKILDDGKSSLDSMTDIDPSVYANFYWVS 164
>tr|Q94E72|Q94E72_ORYSJ Putative 26S proteasome subunit RPN9b (Putative uncharacterized protein) (Os01g0511300 protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0054L14.8 PE=4 SV=1 Length = 385
Score = 236 bits (602), Expect = 9e-61 Identities = 113/162 (69%), Positives = 139/162 (85%) Frame = +2
Query: 149 ALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYRNF 328 ALQY+E QR+A+P+LA+ Y LADLYQRKLWHQLTLKL+ F+ LP Q GD +IQLY NF Sbjct: 2 ALQYVEAQRQARPDLADAYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTIIQLYNNF 61
Query: 329 ISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNMRI 508 IS+FE+KIN LKLAHFAVI SRQY D + AIS+L V KLR +++RRI+EPVLY+ M+I Sbjct: 62 ISDFETKINLLKLAHFAVIASRQYPDKDAAISFLEGVTAKLRETRERRIDEPVLYVKMQI 121
Query: 509 AALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVS 634 AA+ LE+G+QKECK+LL+EGKSTLDSMTDVDP+VHASF+W+S Sbjct: 122 AAINLEKGDQKECKKLLDEGKSTLDSMTDVDPTVHASFYWIS 163
>tr|A2WQL6|A2WQL6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02152 PE=4 SV=1 Length = 385
Score = 236 bits (602), Expect = 9e-61 Identities = 113/162 (69%), Positives = 139/162 (85%) Frame = +2
Query: 149 ALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYRNF 328 ALQY+E QR+A+P+LA+ Y LADLYQRKLWHQLTLKL+ F+ LP Q GD +IQLY NF Sbjct: 2 ALQYVEAQRQARPDLADAYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTIIQLYNNF 61
Query: 329 ISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNMRI 508 IS+FE+KIN LKLAHFAVI SRQY D + AIS+L V KLR +++RRI+EPVLY+ M+I Sbjct: 62 ISDFETKINLLKLAHFAVIASRQYPDKDAAISFLEGVTAKLRETRERRIDEPVLYVKMQI 121
Query: 509 AALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVS 634 AA+ LE+G+QKECK+LL+EGKSTLDSMTDVDP+VHASF+W+S Sbjct: 122 AAINLEKGDQKECKKLLDEGKSTLDSMTDVDPTVHASFYWIS 163
>tr|B8AQT0|B8AQT0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10521 PE=4 SV=1 Length = 385
Score = 233 bits (594), Expect = 7e-60 Identities = 113/162 (69%), Positives = 137/162 (84%) Frame = +2
Query: 149 ALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYRNF 328 ALQ++E+QREA+PELA+ Y LADLYQRKLWHQLTLKL+ F+ LP Q GD LIQLY NF Sbjct: 2 ALQFVESQREARPELADPYADLADLYQRKLWHQLTLKLDHFLQLPAAQTGDTLIQLYNNF 61
Query: 329 ISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNMRI 508 I++FE+KIN LKLAHFAVI SRQY D + AIS+L VI KLR ++ RI EP+LY+ M+I Sbjct: 62 ITDFETKINLLKLAHFAVIASRQYPDKDAAISFLEGVITKLRETKDLRINEPILYVKMQI 121
Query: 509 AALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVS 634 AA+ LE+G QKECK+LL+EGKSTLDSMTDVDP+VHASF+W+S Sbjct: 122 AAINLEKGNQKECKKLLDEGKSTLDSMTDVDPTVHASFYWIS 163
>tr|B4FTW8|B4FTW8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 385
Score = 231 bits (589), Expect = 3e-59 Identities = 109/162 (67%), Positives = 137/162 (84%) Frame = +2
Query: 149 ALQYLETQREAQPELAEWYTSLADLYQRKLWHQLTLKLEQFVGLPVFQGGDALIQLYRNF 328 ALQY+E QR+A+P+LA+WY SLADLYQ+KLWHQLTLKL+QF+ L Q GD +IQLY NF Sbjct: 2 ALQYVEAQRQARPDLADWYASLADLYQQKLWHQLTLKLDQFLQLQAAQTGDTIIQLYNNF 61
Query: 329 ISEFESKINHLKLAHFAVIVSRQYTDVEVAISYLSEVIEKLRASQQRRIEEPVLYLNMRI 508 I++FE+KIN LKLAHFAVI SRQY D + AI++L VI KLR +++ RI EP+LY+ M+I Sbjct: 62 ITDFETKINLLKLAHFAVIASRQYPDKDAAITFLEGVITKLRDTRESRINEPILYVKMQI 121
Query: 509 AALKLEQGEQKECKRLLEEGKSTLDSMTDVDPSVHASFHWVS 634 AA+ LE+G QKECK LE+GK+TLDSMTDVDP+VHASF+W+S Sbjct: 122 AAINLEKGNQKECKNSLEDGKTTLDSMTDVDPTVHASFYWIS 163
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