DK954097
Clone id TST39A01NGRL0019_I13
Library
Length 539
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_I13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGCCGTCACAGTCATTGAGACTCCACCTATGATTGTTGTCGGTCTTGTTGCATATGTGAA
GACTCCTCGTGGGCTGCGAACTTTGACTACCGTGTTTGCCCAGCATTTAAGTGATGAGTT
GAGGAGGCGTTTCTACAAGAACTGGTACAAGTCCAAGAAGAAGGCATTCACCAAGTACTC
CAAGAAGTTTGAACAGGAGGAGGGTAAGAAGGACATAGAATCTGAACTCGAGAAGATGAA
GAAATACGGGAGTGTCATCCGTGTGCTTGCACACACTCAAGTTAGGAAGCTGAAAGGAAT
CAAGCAGAAGAAGGCTCATCTTATGGAGATCCAGGTGAATGGTGGTACCGTAGCTGAGAA
GGTTGACTTTGGCTACAAGTTCTTTGAGAAGGCTGTACCAATTGACAATGTCTTTGCAAA
GGATGAAATGATTGACACCATTGGTGTTACCAGGGGTCATGGGTATGAGGGTGTTGTAAC
CAGGTGGGGCGTGACAAAGGCTACCCCGCAAGACTCATCGTGGTCTCCGTAAAGGTTGC
■■Homology search results ■■ -
sp_hit_id P35684
Definition sp|P35684|RL3_ORYSJ 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica
Align length 166
Score (bit) 249.0
E-value 7.0e-68
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954097|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_I13, 5'
(539 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P35684|RL3_ORYSJ 60S ribosomal protein L3 OS=Oryza sativa sub... 249 7e-68
sp|P17094|RL31_ARATH 60S ribosomal protein L3-1 OS=Arabidopsis t... 245 1e-66
sp|P22738|RL32_ARATH 60S ribosomal protein L3-2 OS=Arabidopsis t... 243 5e-66
sp|Q8NKF4|RL3_ASPFU 60S ribosomal protein L3 OS=Aspergillus fumi... 204 5e-54
sp|Q4R5Q0|RL3_MACFA 60S ribosomal protein L3 OS=Macaca fascicula... 202 1e-53
sp|P39023|RL3_HUMAN 60S ribosomal protein L3 OS=Homo sapiens GN=... 202 1e-53
sp|P59671|RL3_NEUCR 60S ribosomal protein L3 OS=Neurospora crass... 203 1e-53
sp|P21531|RL3_RAT 60S ribosomal protein L3 OS=Rattus norvegicus ... 199 7e-53
sp|P27659|RL3_MOUSE 60S ribosomal protein L3 OS=Mus musculus GN=... 199 7e-53
sp|P39872|RL3_BOVIN 60S ribosomal protein L3 OS=Bos taurus GN=RP... 198 2e-52
sp|Q759R7|RL3_ASHGO 60S ribosomal protein L3 OS=Ashbya gossypii ... 195 2e-51
sp|Q6BXM5|RL3_DEBHA 60S ribosomal protein L3 OS=Debaryomyces han... 192 1e-50
sp|P40372|RL3A_SCHPO 60S ribosomal protein L3-A OS=Schizosacchar... 191 1e-50
sp|P50880|RL3_CAEEL 60S ribosomal protein L3 OS=Caenorhabditis e... 192 2e-50
sp|P14126|RL3_YEAST 60S ribosomal protein L3 OS=Saccharomyces ce... 191 2e-50
sp|P36584|RL3B_SCHPO 60S ribosomal protein L3-B OS=Schizosacchar... 190 2e-50
sp|P49149|RL3_TOXCA 60S ribosomal protein L3 OS=Toxocara canis G... 192 3e-50
sp|Q6FTJ2|RL3_CANGA 60S ribosomal protein L3 OS=Candida glabrata... 191 3e-50
sp|Q6CJR7|RL3_KLULA 60S ribosomal protein L3 OS=Kluyveromyces la... 189 7e-50
sp|Q9NBK4|RL3_CAEBR 60S ribosomal protein L3 OS=Caenorhabditis b... 188 4e-49
sp|P34113|RL3_DICDI 60S ribosomal protein L3 OS=Dictyostelium di... 186 2e-48
sp|O16797|RL3_DROME 60S ribosomal protein L3 OS=Drosophila melan... 179 1e-46
sp|Q92901|RL3L_HUMAN 60S ribosomal protein L3-like OS=Homo sapie... 179 3e-46
sp|Q3SZ10|RL3L_BOVIN 60S ribosomal protein L3-like OS=Bos taurus... 179 3e-46
sp|Q8SQI3|RL3_ENCCU 60S ribosomal protein L3 OS=Encephalitozoon ... 125 1e-28
sp|Q6LX10|RL3_METMP 50S ribosomal protein L3P OS=Methanococcus m... 99 1e-20
sp|A6VHD2|RL3_METM7 50S ribosomal protein L3P OS=Methanococcus m... 99 1e-20
sp|A6UQJ0|RL3_METVS 50S ribosomal protein L3P OS=Methanococcus v... 98 2e-20
sp|Q9UWG2|RL3_METVA 50S ribosomal protein L3P OS=Methanococcus v... 98 2e-20
sp|A4FVY2|RL3_METM5 50S ribosomal protein L3P OS=Methanococcus m... 97 7e-20

>sp|P35684|RL3_ORYSJ 60S ribosomal protein L3 OS=Oryza sativa subsp.
japonica GN=RPL3 PE=2 SV=2
Length = 389

Score = 249 bits (635), Expect(2) = 7e-68
Identities = 113/166 (68%), Positives = 141/166 (84%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT+IETPP+++VGLVAYVKTPRGLR+L +V+AQHLS+E+RRRFYKNW
Sbjct: 75 AVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYA 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
+ + GKK+I+ +LEKMKKY S++RV+AHTQ+RK+KG+KQKKAHLMEIQ+NGGT+A+K
Sbjct: 135 LKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADK 194

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VD+GYKFFEK +P+D VF KDEMID IGVT+G GYEGVVTRWGVT+
Sbjct: 195 VDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240



Score = 29.3 bits (64), Expect(2) = 7e-68
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 240 RLPRKTHRGLRK 251


>sp|P17094|RL31_ARATH 60S ribosomal protein L3-1 OS=Arabidopsis
thaliana GN=ARP1 PE=2 SV=5
Length = 389

Score = 245 bits (625), Expect(2) = 1e-66
Identities = 115/166 (69%), Positives = 139/166 (83%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT+IETP M+VVG+VAYVKTPRGLR+L TV+AQHLS+E+RRRFYKNW
Sbjct: 75 AVTIIETPAMVVVGVVAYVKTPRGLRSLNTVWAQHLSEEVRRRFYKNWAKSKKKAFTGYA 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
+ E+GKK I+++LEKMKKY +VIRVLAHTQ+RK+KG+KQKKAH+MEIQ+NGGT+A+K
Sbjct: 135 KQYDSEDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQK 194

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VDF Y FFEK +PI+ VF KDEMID IGVT+G GYEGVVTRWGVT+
Sbjct: 195 VDFAYSFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240



Score = 29.3 bits (64), Expect(2) = 1e-66
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 240 RLPRKTHRGLRK 251


>sp|P22738|RL32_ARATH 60S ribosomal protein L3-2 OS=Arabidopsis
thaliana GN=ARP2 PE=2 SV=4
Length = 390

Score = 243 bits (619), Expect(2) = 5e-66
Identities = 117/166 (70%), Positives = 136/166 (81%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT+IETPPM+VVG+V YVKTPRGLR+L TV+AQHLS+ELRRRFYKNW
Sbjct: 75 AVTIIETPPMVVVGVVGYVKTPRGLRSLCTVWAQHLSEELRRRFYKNWAKSKKKAFTRYS 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
E EEGKKDI+S+LEKMKKY SVIRVLAHTQ+RK+KG+KQKKAHL EIQ+NGG +A+K
Sbjct: 135 KKHETEEGKKDIQSQLEKMKKYCSVIRVLAHTQIRKMKGLKQKKAHLNEIQINGGDIAKK 194

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VD+ FEK VP+D +F KDEMID IGVT+G GYEGVVTRWGVT+
Sbjct: 195 VDYACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240



Score = 29.3 bits (64), Expect(2) = 5e-66
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 240 RLPRKTHRGLRK 251


>sp|Q8NKF4|RL3_ASPFU 60S ribosomal protein L3 OS=Aspergillus
fumigatus GN=rpl3 PE=1 SV=2
Length = 392

Score = 204 bits (520), Expect(2) = 5e-54
Identities = 99/166 (59%), Positives = 126/166 (75%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT+IETPP++ VG+V Y++TPRGLR+LTTV+A+HLSDE++RRFYKNW
Sbjct: 75 AVTIIETPPLVAVGVVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYA 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
+E G I ELE++KKY +V+RVLAHTQ+RK +KQKKAHLMEIQVNGG+VA+K
Sbjct: 135 KKHAEENGAS-ITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQVNGGSVADK 192

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VDF FEK + ID++F KDEMID I VT+GHG++GV +RWG K
Sbjct: 193 VDFARNLFEKPIEIDSIFEKDEMIDVIAVTKGHGFQGVTSRWGTKK 238



Score = 27.3 bits (59), Expect(2) = 5e-54
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +3

Query: 495 QRLPRKTHRGLRK 533
++LPRKTH+GLRK
Sbjct: 237 KKLPRKTHKGLRK 249


>sp|Q4R5Q0|RL3_MACFA 60S ribosomal protein L3 OS=Macaca fascicularis
GN=RPL3 PE=2 SV=3
Length = 403

Score = 202 bits (514), Expect(2) = 1e-53
Identities = 97/166 (58%), Positives = 123/166 (74%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT++ETPPM+VVG+V YV+TPRGLRT TVFA+H+SDE +RRFYKNW
Sbjct: 75 AVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYC 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
+ E+GKK +E + MKKY VIRV+AHTQ+R L ++QKKAHLMEIQVNGGTVAEK
Sbjct: 135 KKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEK 193

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
+D+ + E+ VP++ VF +DEMID IGVT+G GY+GV +RW K
Sbjct: 194 LDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239



Score = 28.5 bits (62), Expect(2) = 1e-53
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +3

Query: 495 QRLPRKTHRGLRK 533
++LPRKTHRGLRK
Sbjct: 238 KKLPRKTHRGLRK 250


>sp|P39023|RL3_HUMAN 60S ribosomal protein L3 OS=Homo sapiens
GN=RPL3 PE=1 SV=2
Length = 403

Score = 202 bits (514), Expect(2) = 1e-53
Identities = 97/166 (58%), Positives = 123/166 (74%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT++ETPPM+VVG+V YV+TPRGLRT TVFA+H+SDE +RRFYKNW
Sbjct: 75 AVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYC 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
+ E+GKK +E + MKKY VIRV+AHTQ+R L ++QKKAHLMEIQVNGGTVAEK
Sbjct: 135 KKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEK 193

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
+D+ + E+ VP++ VF +DEMID IGVT+G GY+GV +RW K
Sbjct: 194 LDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239



Score = 28.5 bits (62), Expect(2) = 1e-53
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +3

Query: 495 QRLPRKTHRGLRK 533
++LPRKTHRGLRK
Sbjct: 238 KKLPRKTHRGLRK 250


>sp|P59671|RL3_NEUCR 60S ribosomal protein L3 OS=Neurospora crassa
GN=rpl-3 PE=3 SV=1
Length = 392

Score = 203 bits (517), Expect(2) = 1e-53
Identities = 100/166 (60%), Positives = 125/166 (75%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT+I+TPPMIVVGLV Y++TPRGLR+LTTV+A+HLSDE++RRFYKNW
Sbjct: 75 AVTIIDTPPMIVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAFTKYV 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
G I ELE++KKY +V+RVLAHTQ+RK +KQKKAHLMEIQ+NGG+VA+K
Sbjct: 135 KKHSDNNGAA-ITRELERIKKYCTVVRVLAHTQIRKTP-LKQKKAHLMEIQINGGSVADK 192

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
V+FG+ FEK V ID++F KDE+ID I VT+GHG+ GV RWG K
Sbjct: 193 VEFGHGLFEKPVSIDSIFEKDEVIDVIAVTKGHGFTGVTARWGTKK 238



Score = 27.3 bits (59), Expect(2) = 1e-53
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +3

Query: 495 QRLPRKTHRGLRK 533
++LPRKTH+GLRK
Sbjct: 237 KKLPRKTHKGLRK 249


>sp|P21531|RL3_RAT 60S ribosomal protein L3 OS=Rattus norvegicus
GN=Rpl3 PE=1 SV=3
Length = 403

Score = 199 bits (507), Expect(2) = 7e-53
Identities = 95/166 (57%), Positives = 122/166 (73%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT++ETPPM+VVG+V YV+TPRGLRT TVFA+H+SDE +RRFYKNW
Sbjct: 75 AVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYC 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
+ + GKK +E + MKKY VIR++AHTQ+R L ++QKKAHLMEIQVNGGTVAEK
Sbjct: 135 KKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEK 193

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
+D+ + E+ VP++ VF +DEMID IGVT+G GY+GV +RW K
Sbjct: 194 LDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239



Score = 28.5 bits (62), Expect(2) = 7e-53
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +3

Query: 495 QRLPRKTHRGLRK 533
++LPRKTHRGLRK
Sbjct: 238 KKLPRKTHRGLRK 250


>sp|P27659|RL3_MOUSE 60S ribosomal protein L3 OS=Mus musculus
GN=Rpl3 PE=2 SV=2
Length = 403

Score = 199 bits (507), Expect(2) = 7e-53
Identities = 95/166 (57%), Positives = 122/166 (73%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT++ETPPM+VVG+V YV+TPRGLRT TVFA+H+SDE +RRFYKNW
Sbjct: 75 AVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAFTKYC 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
+ + GKK +E + MKKY VIR++AHTQ+R L ++QKKAHLMEIQVNGGTVAEK
Sbjct: 135 KKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLP-LRQKKAHLMEIQVNGGTVAEK 193

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
+D+ + E+ VP++ VF +DEMID IGVT+G GY+GV +RW K
Sbjct: 194 LDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239



Score = 28.5 bits (62), Expect(2) = 7e-53
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +3

Query: 495 QRLPRKTHRGLRK 533
++LPRKTHRGLRK
Sbjct: 238 KKLPRKTHRGLRK 250


>sp|P39872|RL3_BOVIN 60S ribosomal protein L3 OS=Bos taurus GN=RPL3
PE=1 SV=2
Length = 403

Score = 198 bits (503), Expect(2) = 2e-52
Identities = 93/166 (56%), Positives = 121/166 (72%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT++ETPPM++VG+V YV+TPRGLRT T+FA+H+SDE +RRFYKNW
Sbjct: 75 AVTIVETPPMVIVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKNWHKSKKKAFTKYC 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
+ +GKK +E + MKKY VIRV+AHTQ+R L ++QKKAHLME+QVNGGTVAEK
Sbjct: 135 KKWQDADGKKQLERDFSSMKKYCQVIRVIAHTQMRLLP-LRQKKAHLMEVQVNGGTVAEK 193

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
+D+ + E+ VP+ VF +DEMID IGVT+G GY+GV +RW K
Sbjct: 194 LDWARERLEQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKK 239



Score = 28.5 bits (62), Expect(2) = 2e-52
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +3

Query: 495 QRLPRKTHRGLRK 533
++LPRKTHRGLRK
Sbjct: 238 KKLPRKTHRGLRK 250


tr_hit_id A9T2B3
Definition tr|A9T2B3|A9T2B3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 166
Score (bit) 264.0
E-value 2.0e-71
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954097|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_I13, 5'
(539 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T2B3|A9T2B3_PHYPA Predicted protein OS=Physcomitrella paten... 264 2e-71
tr|A9TUZ9|A9TUZ9_PHYPA Predicted protein OS=Physcomitrella paten... 261 2e-70
tr|A9SGV3|A9SGV3_PHYPA Predicted protein OS=Physcomitrella paten... 260 4e-70
tr|B4FFZ6|B4FFZ6_MAIZE 60S ribosomal protein L3 OS=Zea mays PE=2... 253 6e-68
tr|B4FBM9|B4FBM9_MAIZE Putative uncharacterized protein OS=Zea m... 253 6e-68
tr|A9NZI7|A9NZI7_PICSI Putative uncharacterized protein OS=Picea... 253 6e-68
tr|A5BU35|A5BU35_VITVI Putative uncharacterized protein (Chromos... 250 4e-67
tr|Q6TKR0|Q6TKR0_TOBAC Ribosomal protein L3A OS=Nicotiana tabacu... 249 7e-67
tr|A2ZIF8|A2ZIF8_ORYSI Putative uncharacterized protein OS=Oryza... 249 8e-67
tr|Q0IPU6|Q0IPU6_ORYSJ Os12g0167900 protein OS=Oryza sativa subs... 249 9e-67
tr|Q53JG0|Q53JG0_ORYSJ 60S ribosomal protein L3, putative, expre... 248 2e-66
tr|A5D934|A5D934_ORYSA Ribosomal protein L3B OS=Oryza sativa GN=... 248 2e-66
tr|A2ZBV5|A2ZBV5_ORYSI Putative uncharacterized protein OS=Oryza... 248 2e-66
tr|Q6XEB7|Q6XEB7_ORYSI Ribosomal protein L3B (Fragment) OS=Oryza... 248 2e-66
tr|Q9SBR8|Q9SBR8_MEDVA L3 Ribosomal protein OS=Medicago varia GN... 247 2e-66
tr|A1YE28|A1YE28_WHEAT Ribosomal protein L3-A2-II OS=Triticum ae... 246 4e-66
tr|Q7X748|Q7X748_WHEAT Ribosomal protein L3 (Ribosomal protein L... 246 4e-66
tr|Q7X744|Q7X744_WHEAT Ribosomal protein L3 (Ribosomal protein L... 246 4e-66
tr|Q6V959|Q6V959_WHEAT Ribosomal protein L3 (Ribosomal protein L... 246 4e-66
tr|A9PB80|A9PB80_POPTR Putative uncharacterized protein OS=Popul... 246 4e-66
tr|A9P806|A9P806_POPTR Putative uncharacterized protein OS=Popul... 246 4e-66
tr|Q08G39|Q08G39_WHEAT Ribosomal protein L3 OS=Triticum aestivum... 246 4e-66
tr|A1YE34|A1YE34_WHEAT Ribosomal protein L3-B2 OS=Triticum aesti... 246 7e-66
tr|Q0WLE7|Q0WLE7_ARATH Putative uncharacterized protein At1g4317... 245 1e-65
tr|Q6SKP4|Q6SKP4_SOLLC Ribosomal protein L3 OS=Solanum lycopersi... 245 1e-65
tr|Q2VCJ2|Q2VCJ2_SOLTU Ribosomal protein L3-like OS=Solanum tube... 245 1e-65
tr|A5BAZ0|A5BAZ0_VITVI Putative uncharacterized protein OS=Vitis... 245 1e-65
tr|A7R7U1|A7R7U1_VITVI Chromosome undetermined scaffold_2025, wh... 245 1e-65
tr|A9NRB1|A9NRB1_PICSI Putative uncharacterized protein OS=Picea... 244 2e-65
tr|A9PCQ3|A9PCQ3_POPTR Putative uncharacterized protein OS=Popul... 244 3e-65

>tr|A9T2B3|A9T2B3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_190959 PE=3 SV=1
Length = 392

Score = 264 bits (675), Expect(2) = 2e-71
Identities = 127/166 (76%), Positives = 142/166 (85%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT++ETPPM+VVGLVAY+KTPRGLR+L TV+AQHLSDE++RRFYKNW
Sbjct: 75 AVTIVETPPMVVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYKNWYKSKKKAFSKYS 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
E EEGKKD+ESELE+MKKY SVIRVLAHTQVRKLKGIKQKKAHL EIQVNGG++A K
Sbjct: 135 KRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAHLAEIQVNGGSIAAK 194

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VDFGYK FEK VP+D+VF KDEMID IGVTRGHGYEGVVTRWGVT+
Sbjct: 195 VDFGYKLFEKEVPVDSVFRKDEMIDIIGVTRGHGYEGVVTRWGVTR 240



Score = 29.3 bits (64), Expect(2) = 2e-71
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 240 RLPRKTHRGLRK 251


>tr|A9TUZ9|A9TUZ9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_225706 PE=3 SV=1
Length = 392

Score = 261 bits (666), Expect(2) = 2e-70
Identities = 126/166 (75%), Positives = 141/166 (84%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT++ETPP+IVVGLVAY+KTPRGLR+L TV+AQHLSDE++RRFYKNW
Sbjct: 75 AVTIVETPPIIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYKNWYKSKKKAFSKYS 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
E EEGK+D++SELE+MKKY SVIRVLAHTQVRKLKGIKQKKAHL EIQVNGGT+AEK
Sbjct: 135 KRYESEEGKRDLQSELERMKKYASVIRVLAHTQVRKLKGIKQKKAHLAEIQVNGGTIAEK 194

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VDFGY FEK VP+D VF KDEMID IGVTRGHGYEGVVTRWGVT+
Sbjct: 195 VDFGYNLFEKPVPVDAVFNKDEMIDIIGVTRGHGYEGVVTRWGVTR 240



Score = 29.3 bits (64), Expect(2) = 2e-70
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 240 RLPRKTHRGLRK 251


>tr|A9SGV3|A9SGV3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_234838 PE=3 SV=1
Length = 392

Score = 260 bits (664), Expect(2) = 4e-70
Identities = 127/166 (76%), Positives = 140/166 (84%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT++ETPPMIVVGLVAY+KTPRGLR+L TV+AQHLSDE++RRFYKNW
Sbjct: 75 AVTIVETPPMIVVGLVAYIKTPRGLRSLNTVWAQHLSDEVKRRFYKNWSKSKKKAFSNYS 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
E EEGKKD+ESELE+MKKY SVIRVLAHTQVRKLKGIKQKKAHL EIQVNGG +AEK
Sbjct: 135 KRYESEEGKKDVESELERMKKYASVIRVLAHTQVRKLKGIKQKKAHLAEIQVNGGNIAEK 194

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VDFG+K FEK V +D VF KDEMID IGVTRGHGYEGVVTRWGVT+
Sbjct: 195 VDFGFKLFEKWVSVDAVFRKDEMIDIIGVTRGHGYEGVVTRWGVTR 240



Score = 29.3 bits (64), Expect(2) = 4e-70
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 240 RLPRKTHRGLRK 251


>tr|B4FFZ6|B4FFZ6_MAIZE 60S ribosomal protein L3 OS=Zea mays PE=2
SV=1
Length = 389

Score = 253 bits (645), Expect(2) = 6e-68
Identities = 119/166 (71%), Positives = 141/166 (84%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT+IETPP+++VGLVAYVKTPRGLRTL +V+AQHLS+E+RRRFYKNW
Sbjct: 75 AVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYA 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
E + GKK+I+ +LEKMKKY SVIRV+AHTQ+RK+KG+KQKKAHLMEIQVNGGT+A+K
Sbjct: 135 LKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADK 194

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VD+GYKFFEK VP+D VF KDEMID IGVT+G GYEGVVTRWGVT+
Sbjct: 195 VDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240



Score = 29.3 bits (64), Expect(2) = 6e-68
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 240 RLPRKTHRGLRK 251


>tr|B4FBM9|B4FBM9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 389

Score = 253 bits (645), Expect(2) = 6e-68
Identities = 119/166 (71%), Positives = 141/166 (84%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT+IETPP+++VGLVAYVKTPRGLRTL +V+AQHLS+E+RRRFYKNW
Sbjct: 75 AVTIIETPPLVIVGLVAYVKTPRGLRTLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYA 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
E + GKK+I+ +LEKMKKY SVIRV+AHTQ+RK+KG+KQKKAHLMEIQVNGGT+A+K
Sbjct: 135 LKYENDAGKKEIQLQLEKMKKYASVIRVIAHTQIRKMKGLKQKKAHLMEIQVNGGTIADK 194

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VD+GYKFFEK VP+D VF KDEMID IGVT+G GYEGVVTRWGVT+
Sbjct: 195 VDYGYKFFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240



Score = 29.3 bits (64), Expect(2) = 6e-68
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 240 RLPRKTHRGLRK 251


>tr|A9NZI7|A9NZI7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 389

Score = 253 bits (645), Expect(2) = 6e-68
Identities = 119/166 (71%), Positives = 141/166 (84%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT+IETPPM++VG+VAY+KTPRGLRTL TV+AQHLS+E+RRRFYKNW
Sbjct: 75 AVTLIETPPMVIVGVVAYIKTPRGLRTLNTVWAQHLSEEVRRRFYKNWYRAKKKAFTKYA 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
+ EEGKKDI++ELEKMKKY +VIRVLAHTQ++K+KG+KQKKAHLMEIQVNGGTVA+K
Sbjct: 135 KKYDSEEGKKDIQTELEKMKKYATVIRVLAHTQIKKMKGLKQKKAHLMEIQVNGGTVAQK 194

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VD+ Y FFEK VPID +F KDEM+D IGVT+G GYEGVVTRWGVT+
Sbjct: 195 VDYAYNFFEKQVPIDALFQKDEMVDIIGVTKGKGYEGVVTRWGVTR 240



Score = 29.3 bits (64), Expect(2) = 6e-68
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 240 RLPRKTHRGLRK 251


>tr|A5BU35|A5BU35_VITVI Putative uncharacterized protein (Chromosome
chr18 scaffold_59, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00031743001 PE=3 SV=1
Length = 389

Score = 250 bits (638), Expect(2) = 4e-67
Identities = 117/166 (70%), Positives = 140/166 (84%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT++ETPPM++VG+VAYVKTPRGLR+L TV+AQHLS+E++RRFYKNW
Sbjct: 75 AVTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHLSEEVKRRFYKNWCKSKKKAFTKYS 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
E EEGKK I+++LEKMKKY SVIRVLAHTQ+RK+KG+KQKKAHLMEIQVNGGT+A+K
Sbjct: 135 KQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK 194

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VD+ Y FFEK VP+D +F KDEMID IGVT+G GYEGVVTRWGVT+
Sbjct: 195 VDYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240



Score = 29.3 bits (64), Expect(2) = 4e-67
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 240 RLPRKTHRGLRK 251


>tr|Q6TKR0|Q6TKR0_TOBAC Ribosomal protein L3A OS=Nicotiana tabacum
GN=RPL3A PE=2 SV=1
Length = 389

Score = 249 bits (636), Expect(2) = 7e-67
Identities = 118/166 (71%), Positives = 138/166 (83%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT+IETPPM++VG+V YVKTPRGLR L TV+AQHLS+EL+RRFYKNW
Sbjct: 75 AVTIIETPPMVIVGVVGYVKTPRGLRCLNTVWAQHLSEELKRRFYKNWCKSKKKAFLKYS 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
E +EGKKDI+++LEK+KKY VIRVLAHTQ+RK+KG+KQKKAHLMEIQVNGGT+A+K
Sbjct: 135 KKYESDEGKKDIQTQLEKLKKYACVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQK 194

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VDF Y FFEK VP+D VF KDEMID IGVT+G GYEGVVTRWGVT+
Sbjct: 195 VDFAYGFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240



Score = 29.3 bits (64), Expect(2) = 7e-67
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 240 RLPRKTHRGLRK 251


>tr|A2ZIF8|A2ZIF8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_37606 PE=3 SV=1
Length = 733

Score = 249 bits (635), Expect(2) = 8e-67
Identities = 113/166 (68%), Positives = 141/166 (84%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT+IETPP+++VGLVAYVKTPRGLR+L +V+AQHLS+E+RRRFYKNW
Sbjct: 419 AVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYA 478

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
+ + GKK+I+ +LEKMKKY S++RV+AHTQ+RK+KG+KQKKAHLMEIQ+NGGT+A+K
Sbjct: 479 LKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADK 538

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VD+GYKFFEK +P+D VF KDEMID IGVT+G GYEGVVTRWGVT+
Sbjct: 539 VDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 584



Score = 29.3 bits (64), Expect(2) = 8e-67
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 584 RLPRKTHRGLRK 595


>tr|Q0IPU6|Q0IPU6_ORYSJ Os12g0167900 protein OS=Oryza sativa subsp.
japonica GN=Os12g0167900 PE=2 SV=1
Length = 389

Score = 249 bits (635), Expect(2) = 9e-67
Identities = 113/166 (68%), Positives = 141/166 (84%)
Frame = +2

Query: 2 AVTVIETPPMIVVGLVAYVKTPRGLRTLTTVFAQHLSDELRRRFYKNWXXXXXXXXXXXX 181
AVT+IETPP+++VGLVAYVKTPRGLR+L +V+AQHLS+E+RRRFYKNW
Sbjct: 75 AVTIIETPPLVIVGLVAYVKTPRGLRSLNSVWAQHLSEEVRRRFYKNWCKSKKKAFTKYA 134

Query: 182 XXXEQEEGKKDIESELEKMKKYGSVIRVLAHTQVRKLKGIKQKKAHLMEIQVNGGTVAEK 361
+ + GKK+I+ +LEKMKKY S++RV+AHTQ+RK+KG+KQKKAHLMEIQ+NGGT+A+K
Sbjct: 135 LKYDSDAGKKEIQMQLEKMKKYASIVRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADK 194

Query: 362 VDFGYKFFEKAVPIDNVFAKDEMIDTIGVTRGHGYEGVVTRWGVTK 499
VD+GYKFFEK +P+D VF KDEMID IGVT+G GYEGVVTRWGVT+
Sbjct: 195 VDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTR 240



Score = 29.3 bits (64), Expect(2) = 9e-67
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3

Query: 498 RLPRKTHRGLRK 533
RLPRKTHRGLRK
Sbjct: 240 RLPRKTHRGLRK 251