DK954107 |
Clone id |
TST39A01NGRL0019_I23 |
Library |
TST39 |
Length |
546 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_I23. 5' end sequence. |
Accession |
DK954107 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL181Contig1 |
Sequence |
GCTCCTGCGAGGATGAGTTCGTCGGAAGAGGCTGCTGCTCCAGCCGCAGCCACAGTGCCA GAGTCTGTGTTGAAGAAGAGGAAGCGCGATGAGCAATGGGCGCTTGCAAAGAAAGAGCAG GCGCATCAAGCCAAATTGAAGAGCATCGCTAATCGAAAGGTCATCTTCAAGAGGGCGGAG CAGTATATCAAAGAGTACAGGCAGCAGGCGGCAGATCTGATCAGACTGAAGCGGGAGGCA AAGCTAAAGGGCGGTTTCTATGTCGACCCTGAGGCCAAGTTGCTCTTCGTCATCCGCATT CGAGGTATCAATGACATGCATCCCAAAACTCGGAAGATTTTACAACTCCTTCGTTTACGA CAGATCTTCAATGGAGTGTTCTTGAAAGTGAACAAAGCTACTATAAACATGCTTAGAAGA GTGGAGCCTTATGTCACATATGGGTATCCCAACTTGAAGAGTGTTAAGGAGCTGATTTAC AAAGAGAGGATTTGGCAAGGTTAGCAAGGCGAGGATTCCTTTGACTGACAAATTTCAATC ATCGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P60039 |
Definition |
sp|P60039|RL73_ARATH 60S ribosomal protein L7-3 OS=Arabidopsis thaliana |
Align length |
139 |
Score (bit) |
206.0 |
E-value |
8.0e-53 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NR08 |
Definition |
tr|A9NR08|A9NR08_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
139 |
Score (bit) |
216.0 |
E-value |
6.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954107|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_I23, 5' (546 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NR08|A9NR08_PICSI Putative uncharacterized protein OS=Picea... 216 6e-55 tr|A9P1J6|A9P1J6_PICSI Putative uncharacterized protein OS=Picea... 215 1e-54 tr|A9NPA4|A9NPA4_PICSI Putative uncharacterized protein OS=Picea... 215 1e-54 tr|A9PGL2|A9PGL2_POPTR Putative uncharacterized protein OS=Popul... 208 2e-52 tr|B3TLT9|B3TLT9_ELAGV 60S ribosomal protein L7 OS=Elaeis guinee... 207 3e-52 tr|Q3EBG6|Q3EBG6_ARATH Uncharacterized protein At2g44120.2 OS=Ar... 206 8e-52 tr|A8MRH4|A8MRH4_ARATH Uncharacterized protein At2g01250.2 OS=Ar... 202 7e-51 tr|Q38HU4|Q38HU4_SOLTU Thaliana 60S ribosomal protein L7 (At2g44... 201 3e-50 tr|A9RG91|A9RG91_PHYPA Predicted protein OS=Physcomitrella paten... 200 5e-50 tr|B4F8K1|B4F8K1_MAIZE 60S ribosomal protein L7-2 OS=Zea mays PE... 199 6e-50 tr|B4FQ03|B4FQ03_MAIZE 60S ribosomal protein L7-2 OS=Zea mays PE... 199 8e-50 tr|A9TJB0|A9TJB0_PHYPA Predicted protein OS=Physcomitrella paten... 199 8e-50 tr|A7QUB3|A7QUB3_VITVI Chromosome chr11 scaffold_177, whole geno... 199 8e-50 tr|A9T4E1|A9T4E1_PHYPA Predicted protein OS=Physcomitrella paten... 198 1e-49 tr|A9RTM8|A9RTM8_PHYPA Predicted protein OS=Physcomitrella paten... 198 1e-49 tr|A9P9W9|A9P9W9_POPTR Putative uncharacterized protein OS=Popul... 198 1e-49 tr|B4FTW5|B4FTW5_MAIZE 60S ribosomal protein L7-1 OS=Zea mays PE... 197 3e-49 tr|A9RCC4|A9RCC4_PHYPA Predicted protein OS=Physcomitrella paten... 197 3e-49 tr|Q6YYR2|Q6YYR2_ORYSJ Os08g0234000 protein OS=Oryza sativa subs... 197 4e-49 tr|A3BQX7|A3BQX7_ORYSJ Putative uncharacterized protein OS=Oryza... 197 4e-49 tr|A2YSN9|A2YSN9_ORYSI Putative uncharacterized protein OS=Oryza... 197 4e-49 tr|A9PEI9|A9PEI9_POPTR Putative uncharacterized protein OS=Popul... 196 9e-49 tr|Q7X8D0|Q7X8D0_ORYSJ OSJNBa0035M09.3 protein (Putative unchara... 195 1e-48 tr|Q0JAC6|Q0JAC6_ORYSJ Os04g0605900 protein OS=Oryza sativa subs... 195 1e-48 tr|B8ATU3|B8ATU3_ORYSI Putative uncharacterized protein OS=Oryza... 195 1e-48 tr|B4FSG3|B4FSG3_MAIZE 60S ribosomal protein L7-1 OS=Zea mays PE... 194 2e-48 tr|Q2HVI3|Q2HVI3_MEDTR Ribosomal protein L30 OS=Medicago truncat... 189 8e-47 tr|B7FH82|B7FH82_MEDTR Putative uncharacterized protein OS=Medic... 189 8e-47 tr|B7FHC4|B7FHC4_MEDTR Putative uncharacterized protein OS=Medic... 187 2e-46 tr|Q5I7K6|Q5I7K6_WHEAT Ribosomal protein L7 OS=Triticum aestivum... 187 3e-46
>tr|A9NR08|A9NR08_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 246
Score = 216 bits (550), Expect = 6e-55 Identities = 107/139 (76%), Positives = 117/139 (84%) Frame = +1
Query: 67 VLKKRKRDEQWALAKKEQAHQAKLKSIANRKVIFKRAEQYIKEYRQQAADLIRLKREAKL 246 VLKKRKR+E+W KK+Q AK KS NRK+IFKRAE+YIKEYR Q DLIRLKREAKL Sbjct: 16 VLKKRKRNEEWEKNKKQQLEAAKAKSAQNRKLIFKRAEKYIKEYRDQELDLIRLKREAKL 75
Query: 247 KGGFYVDPEAKLLFVIRIRGINDMHPKTRKXXXXXXXXXXFNGVFLKVNKATINMLRRVE 426 +GGFYVDPEAKLLF+IRIRGINDMHPKTRK FNGVFLKVNKATINML+RVE Sbjct: 76 RGGFYVDPEAKLLFIIRIRGINDMHPKTRKILQLLRLRQIFNGVFLKVNKATINMLQRVE 135
Query: 427 PYVTYGYPNLKSVKELIYK 483 PYVTYGYPNLKS++ELIYK Sbjct: 136 PYVTYGYPNLKSIRELIYK 154
Score = 34.7 bits (78), Expect = 3.4 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = +2
Query: 443 GIPT*RVLRS*FTKRGFGKVSKARIPLTD 529 G P + +R KRG+GKV K RIPLTD Sbjct: 141 GYPNLKSIRELIYKRGYGKVDKQRIPLTD 169
>tr|A9P1J6|A9P1J6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 246
Score = 215 bits (548), Expect = 1e-54 Identities = 106/139 (76%), Positives = 117/139 (84%) Frame = +1
Query: 67 VLKKRKRDEQWALAKKEQAHQAKLKSIANRKVIFKRAEQYIKEYRQQAADLIRLKREAKL 246 VLKKRKR+E+W KKEQ AKLK NRK+IFKRAE+YIKEYR Q DLIRLKR+AKL Sbjct: 16 VLKKRKRNEEWEKNKKEQLDAAKLKRAQNRKLIFKRAEKYIKEYRDQERDLIRLKRDAKL 75
Query: 247 KGGFYVDPEAKLLFVIRIRGINDMHPKTRKXXXXXXXXXXFNGVFLKVNKATINMLRRVE 426 +GGFYVDPEAKLLF+IRIRGINDMHPKTRK FNGVFLKVNKAT+NML+RVE Sbjct: 76 RGGFYVDPEAKLLFIIRIRGINDMHPKTRKILQLLRLRQIFNGVFLKVNKATVNMLQRVE 135
Query: 427 PYVTYGYPNLKSVKELIYK 483 PYVTYGYPNLKS++ELIYK Sbjct: 136 PYVTYGYPNLKSIRELIYK 154
Score = 35.0 bits (79), Expect = 2.6 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +2
Query: 443 GIPT*RVLRS*FTKRGFGKVSKARIPLTD 529 G P + +R KRG+GKV+K RIPLTD Sbjct: 141 GYPNLKSIRELIYKRGYGKVNKQRIPLTD 169
>tr|A9NPA4|A9NPA4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 246
Score = 215 bits (548), Expect = 1e-54 Identities = 106/139 (76%), Positives = 117/139 (84%) Frame = +1
Query: 67 VLKKRKRDEQWALAKKEQAHQAKLKSIANRKVIFKRAEQYIKEYRQQAADLIRLKREAKL 246 VLKKRKR+E+W KKEQ AKLK NRK+IFKRAE+YIKEYR Q DLIRLKR+AKL Sbjct: 16 VLKKRKRNEEWEKNKKEQLDAAKLKRAQNRKLIFKRAEKYIKEYRDQERDLIRLKRDAKL 75
Query: 247 KGGFYVDPEAKLLFVIRIRGINDMHPKTRKXXXXXXXXXXFNGVFLKVNKATINMLRRVE 426 +GGFYVDPEAKLLF+IRIRGINDMHPKTRK FNGVFLKVNKAT+NML+RVE Sbjct: 76 RGGFYVDPEAKLLFIIRIRGINDMHPKTRKILQLLRLRQIFNGVFLKVNKATVNMLQRVE 135
Query: 427 PYVTYGYPNLKSVKELIYK 483 PYVTYGYPNLKS++ELIYK Sbjct: 136 PYVTYGYPNLKSIRELIYK 154
Score = 35.0 bits (79), Expect = 2.6 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +2
Query: 443 GIPT*RVLRS*FTKRGFGKVSKARIPLTD 529 G P + +R KRG+GKV+K RIPLTD Sbjct: 141 GYPNLKSIRELIYKRGYGKVNKQRIPLTD 169
>tr|A9PGL2|A9PGL2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 243
Score = 208 bits (529), Expect = 2e-52 Identities = 101/139 (72%), Positives = 115/139 (82%) Frame = +1
Query: 67 VLKKRKRDEQWALAKKEQAHQAKLKSIANRKVIFKRAEQYIKEYRQQAADLIRLKREAKL 246 VLKKRKR+E+WALAKK++ K K+ NRK+IFKRA+QY KEY +Q L++LKREA+L Sbjct: 13 VLKKRKREEEWALAKKQELAATKKKNAENRKIIFKRAKQYSKEYEEQGKQLVQLKREARL 72
Query: 247 KGGFYVDPEAKLLFVIRIRGINDMHPKTRKXXXXXXXXXXFNGVFLKVNKATINMLRRVE 426 KGGFYVDPEAKLLF+IRIRGIN MHPKTR FNGVFLKVNKAT+NMLRRVE Sbjct: 73 KGGFYVDPEAKLLFIIRIRGINAMHPKTRSILQLLRLRQIFNGVFLKVNKATVNMLRRVE 132
Query: 427 PYVTYGYPNLKSVKELIYK 483 PYVTYGYPNLKSV+ELIYK Sbjct: 133 PYVTYGYPNLKSVRELIYK 151
Score = 33.1 bits (74), Expect = 9.9 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = +2
Query: 443 GIPT*RVLRS*FTKRGFGKVSKARIPLTD 529 G P + +R KRGFGK+++ RIPLTD Sbjct: 138 GYPNLKSVRELIYKRGFGKLNQQRIPLTD 166
>tr|B3TLT9|B3TLT9_ELAGV 60S ribosomal protein L7 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 244
Score = 207 bits (527), Expect = 3e-52 Identities = 104/139 (74%), Positives = 114/139 (82%) Frame = +1
Query: 67 VLKKRKRDEQWALAKKEQAHQAKLKSIANRKVIFKRAEQYIKEYRQQAADLIRLKREAKL 246 VLKKRKR+E+WALAKK+Q K K ANRK+I RA+QY KEY +Q +LIRLKREA++ Sbjct: 14 VLKKRKREEEWALAKKKQLDAKKKKDRANRKLICSRAQQYAKEYEEQEKELIRLKREARM 73
Query: 247 KGGFYVDPEAKLLFVIRIRGINDMHPKTRKXXXXXXXXXXFNGVFLKVNKATINMLRRVE 426 KGGFYV PEAKLLF+IRIRGIN MHPKTRK FNGVFLKVNKATINMLRRVE Sbjct: 74 KGGFYVSPEAKLLFIIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINMLRRVE 133
Query: 427 PYVTYGYPNLKSVKELIYK 483 PYVTYGYPNLKSVKELIYK Sbjct: 134 PYVTYGYPNLKSVKELIYK 152
>tr|Q3EBG6|Q3EBG6_ARATH Uncharacterized protein At2g44120.2 OS=Arabidopsis thaliana GN=At2g44120 PE=3 SV=1 Length = 247
Score = 206 bits (523), Expect = 8e-52 Identities = 104/139 (74%), Positives = 116/139 (83%) Frame = +1
Query: 67 VLKKRKRDEQWALAKKEQAHQAKLKSIANRKVIFKRAEQYIKEYRQQAADLIRLKREAKL 246 VLKK KR E+WALAKK++A AK KS+ RK+IFKRAEQY KEY ++ +LIRLKREAKL Sbjct: 17 VLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNELIRLKREAKL 76
Query: 247 KGGFYVDPEAKLLFVIRIRGINDMHPKTRKXXXXXXXXXXFNGVFLKVNKATINMLRRVE 426 KGGFYVDPEAKLLF+IRIRGIN + PKT+K FNGVFLKVNKAT+NMLRRVE Sbjct: 77 KGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVE 136
Query: 427 PYVTYGYPNLKSVKELIYK 483 PYVTYGYPNLKSVKELIYK Sbjct: 137 PYVTYGYPNLKSVKELIYK 155
>tr|A8MRH4|A8MRH4_ARATH Uncharacterized protein At2g01250.2 OS=Arabidopsis thaliana GN=At2g01250 PE=4 SV=1 Length = 184
Score = 202 bits (515), Expect = 7e-51 Identities = 101/139 (72%), Positives = 114/139 (82%) Frame = +1
Query: 67 VLKKRKRDEQWALAKKEQAHQAKLKSIANRKVIFKRAEQYIKEYRQQAADLIRLKREAKL 246 VLKKRKR+E+WAL KK+ AK K+ NRK+IFKRAEQY KEY ++ +LI LKREAKL Sbjct: 12 VLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELISLKREAKL 71
Query: 247 KGGFYVDPEAKLLFVIRIRGINDMHPKTRKXXXXXXXXXXFNGVFLKVNKATINMLRRVE 426 KGGFYVDPEAKLLF+IRIRGIN + PKT+K FNGVFLKVNKAT+NMLRRVE Sbjct: 72 KGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVE 131
Query: 427 PYVTYGYPNLKSVKELIYK 483 PYVTYG+PNLKSVKELIYK Sbjct: 132 PYVTYGFPNLKSVKELIYK 150
>tr|Q38HU4|Q38HU4_SOLTU Thaliana 60S ribosomal protein L7 (At2g44120) OS=Solanum tuberosum PE=2 SV=1 Length = 242
Score = 201 bits (510), Expect = 3e-50 Identities = 98/139 (70%), Positives = 115/139 (82%) Frame = +1
Query: 67 VLKKRKRDEQWALAKKEQAHQAKLKSIANRKVIFKRAEQYIKEYRQQAADLIRLKREAKL 246 VLKK+KR+E+WAL KK++ AK KS+ NRK+I+ RA+QY KEY +Q +LIRLKREA+L Sbjct: 12 VLKKQKRNEEWALVKKQELAVAKNKSVENRKLIYNRAKQYAKEYSEQEKELIRLKREARL 71
Query: 247 KGGFYVDPEAKLLFVIRIRGINDMHPKTRKXXXXXXXXXXFNGVFLKVNKATINMLRRVE 426 KGGFYVDPEAKLLF+IRIRGIN M P+T+K FNGVFLKVNKAT+NML RVE Sbjct: 72 KGGFYVDPEAKLLFIIRIRGINAMPPQTKKILQLLRLRQIFNGVFLKVNKATVNMLHRVE 131
Query: 427 PYVTYGYPNLKSVKELIYK 483 PYVTYGYPNLKS+KELIYK Sbjct: 132 PYVTYGYPNLKSIKELIYK 150
>tr|A9RG91|A9RG91_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_158886 PE=3 SV=1 Length = 244
Score = 200 bits (508), Expect = 5e-50 Identities = 97/139 (69%), Positives = 113/139 (81%) Frame = +1
Query: 67 VLKKRKRDEQWALAKKEQAHQAKLKSIANRKVIFKRAEQYIKEYRQQAADLIRLKREAKL 246 +LKKRKRDEQWA AK Q AK ++ NR +IFKRA+QY +EY++Q +LI LKREAKL Sbjct: 14 LLKKRKRDEQWAAAKSSQLAAAKSRNAKNRTLIFKRAQQYQEEYQRQEKELISLKREAKL 73
Query: 247 KGGFYVDPEAKLLFVIRIRGINDMHPKTRKXXXXXXXXXXFNGVFLKVNKATINMLRRVE 426 KGGFYV+PE KL+FV+RIRGINDMHPK RK FNGVF+KVNKAT+NMLRRVE Sbjct: 74 KGGFYVEPEPKLMFVVRIRGINDMHPKVRKIMQLLRLRQIFNGVFMKVNKATVNMLRRVE 133
Query: 427 PYVTYGYPNLKSVKELIYK 483 PYVTYGYPNLK+V+ELIYK Sbjct: 134 PYVTYGYPNLKTVRELIYK 152
>tr|B4F8K1|B4F8K1_MAIZE 60S ribosomal protein L7-2 OS=Zea mays PE=2 SV=1 Length = 244
Score = 199 bits (507), Expect = 6e-50 Identities = 100/139 (71%), Positives = 113/139 (81%) Frame = +1
Query: 67 VLKKRKRDEQWALAKKEQAHQAKLKSIANRKVIFKRAEQYIKEYRQQAADLIRLKREAKL 246 VL+KRKR+EQWA KKE++ + KSI NRK+IF RA+QY +EY Q +L++LKREA+L Sbjct: 14 VLRKRKREEQWAAEKKEKSLAERKKSIENRKLIFTRAKQYAEEYDAQEKELVQLKREARL 73
Query: 247 KGGFYVDPEAKLLFVIRIRGINDMHPKTRKXXXXXXXXXXFNGVFLKVNKATINMLRRVE 426 KGGFYV PEAKLLFVIRIRGIN MHPKTRK FNGVFLKVNKATINMLRRVE Sbjct: 74 KGGFYVSPEAKLLFVIRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATINMLRRVE 133
Query: 427 PYVTYGYPNLKSVKELIYK 483 PYV YGYPNLKSV+ELIYK Sbjct: 134 PYVAYGYPNLKSVRELIYK 152
|