DK954119
Clone id TST39A01NGRL0019_J12
Library
Length 573
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_J12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGGCTACCTCGTTCTGTCAAATTTTGGCTTGCAACCCAGAGATCTTCGATGCACAAGAGC
TTTTAGACATTCTCTGTGCCCCCTTCCGCCTCTTGCTGGGCAGACGAACACATCATCATA
ATCATTGAATACTGGCTTTGGTATGATTACCAAAGTTACAAGAATCTATTTTCTTATGCA
CGATAAGAAACGATGCTTCTAATCTTATTAGAAGGCTTTTGTCAACTCGTCTAAAGTCGC
ATGAAGGAATTGACAACCTAGCAGGTTGGATTTGAACGAGTTTTGAGGCATAGTTGGTGA
TGCCAAAAAGCACGACATCTTAATTTCTGCCAAGTCAGGGTTTTGAAAGATAAGAGGCTT
TACTTTGTTATGTTAATTGGTAGACTAAGTTAACAAGGAACATGGTATATCCATTTGTGT
TCCAATCTGGTATCAAATACAAAATGAACGAGGACTCGGACTCAGGAGCTTGTATCATAT
GAAAAGAAAAACACTCATTTGGCCACTTTAGTGTGGTCTATGTGAATATGCCAGGTGTTG
CATATAAGATTTTGGATCAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q9K5Z9
Definition sp|Q9K5Z9|LCTP_BACHD L-lactate permease OS=Bacillus halodurans
Align length 78
Score (bit) 30.4
E-value 6.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954119|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_J12, 5'
(558 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9K5Z9|LCTP_BACHD L-lactate permease OS=Bacillus halodurans G... 30 6.2
sp|O43008|CRS1_SCHPO Meiosis-specific cyclin crs1 OS=Schizosacch... 30 8.1

>sp|Q9K5Z9|LCTP_BACHD L-lactate permease OS=Bacillus halodurans
GN=lctP PE=3 SV=1
Length = 524

Score = 30.4 bits (67), Expect = 6.2
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = -1

Query: 423 GTQMDIPCSLLT*STN*HNKVKPLIFQNPDLAEIKMS-------CFLASPTMPQNSFKSN 265
G + +P L+T S ++ IF P+LA+I S P+N+F N
Sbjct: 220 GIKEILPAILVTSSVYTVSQALITIFIGPELADIIPSLLTMGLLALFLKRWQPRNTFLLN 279

Query: 264 LLGCQFLHATLDELTKAF 211
GC+ HA+L ++ KA+
Sbjct: 280 GNGCESEHASLKDVIKAW 297


>sp|O43008|CRS1_SCHPO Meiosis-specific cyclin crs1
OS=Schizosaccharomyces pombe GN=crs1 PE=1 SV=1
Length = 229

Score = 30.0 bits (66), Expect = 8.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1

Query: 312 CFLASPTMPQNSFKSNLLGCQFL 244
CF PT+P SFK +GC F+
Sbjct: 117 CFTVKPTIPTTSFKIYAIGCLFI 139


tr_hit_id B0PF21
Definition tr|B0PF21|B0PF21_9FIRM Putative uncharacterized protein OS=Anaerotruncus colihominis DSM 17241
Align length 27
Score (bit) 34.3
E-value 4.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954119|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_J12, 5'
(558 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0PF21|B0PF21_9FIRM Putative uncharacterized protein OS=Anaer... 34 4.7
tr|Q4UFK1|Q4UFK1_THEAN Putative uncharacterized protein OS=Theil... 34 6.1

>tr|B0PF21|B0PF21_9FIRM Putative uncharacterized protein
OS=Anaerotruncus colihominis DSM 17241 GN=ANACOL_03400
PE=4 SV=1
Length = 353

Score = 34.3 bits (77), Expect = 4.7
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1

Query: 129 FNDYDDVFVCPARGGRGHRECLKALVH 49
F D DD+ VCP G HREC L H
Sbjct: 30 FTDNDDIVVCPVCGAPHHRECYSRLGH 56


>tr|Q4UFK1|Q4UFK1_THEAN Putative uncharacterized protein
OS=Theileria annulata GN=TA15565 PE=4 SV=1
Length = 186

Score = 33.9 bits (76), Expect = 6.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3

Query: 487 SFHMIQAPESESSFILYLIPDWNTNGYTMFLVNLVYQ 377
SF ++ AP+ F Y++P + N FL NL+YQ
Sbjct: 147 SFAVLNAPDRVKQFAKYILPKTHYNNAVQFLFNLIYQ 183