Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954128|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_J21, 5' (604 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 246 4e-71 sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas... 246 3e-68 sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl... 233 1e-64 sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas... 233 2e-64 sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas... 233 2e-64 sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty... 244 2e-64 sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop... 232 3e-64 sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop... 232 3e-64 sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl... 241 2e-63 sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 238 2e-62 sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 234 3e-61 sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 234 3e-61 sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 232 1e-60 sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 231 2e-60 sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 231 2e-60 sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl... 218 3e-60 sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 231 3e-60 sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 230 4e-60 sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 230 5e-60 sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 229 6e-60 sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 229 8e-60 sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop... 229 8e-60 sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 228 2e-59 sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 228 2e-59 sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 227 4e-59 sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro... 227 4e-59 sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop... 227 4e-59 sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 226 5e-59 sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 226 9e-59 sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl... 226 9e-59
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1 Length = 265
Score = 246 bits (629), Expect(2) = 4e-71 Identities = 129/183 (70%), Positives = 140/183 (76%), Gaps = 2/183 (1%) Frame = +1
Query: 28 AMASTTLSSSFCGQAVLKQQGSELSRKVGASEARVQMKT--SKGSSSSIWYGPDRXXXXX 201 A ++ L+S+F GQ + + +ELSRKVGA EARVQM SK S SIWYG DR Sbjct: 2 ATSTAALTSTFSGQQL--KPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLG 59
Query: 202 XXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLS 381 +GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELL+ Sbjct: 60 PFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 119
Query: 382 KNGVPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRR 561 KNGV FGEAVWFKAGSQIF+EGGLDYLGNP LVHAQSILAIWA QVILMGAVEG Sbjct: 120 KNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 179
Query: 562 PSG 570 P G Sbjct: 180 PLG 182
Score = 42.4 bits (98), Expect(2) = 4e-71 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRVAGGPLG+V DPIYPGG Sbjct: 174 YRVAGGPLGEVEDPIYPGG 192
>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2 Length = 205
Score = 246 bits (627), Expect(2) = 3e-68 Identities = 127/179 (70%), Positives = 135/179 (75%), Gaps = 1/179 (0%) Frame = +1
Query: 37 STTLSSSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXXXXXX 213 ST S+F GQ +LK Q +EL RKVG + RV M+ T K + SIWYGPDR Sbjct: 4 STIQQSAFAGQTLLKPQ-NELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSE 62
Query: 214 XXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSKNGV 393 TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL+KNGV Sbjct: 63 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGV 122
Query: 394 PFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRPSG 570 FGEAVWFKAGSQIF EGGLDYLGNP LVHAQSILAIWA QV+LMGAVEG G P G Sbjct: 123 KFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLG 181
Score = 33.5 bits (75), Expect(2) = 3e-68 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ D +YPGG Sbjct: 173 YRVGGGPLGEGLDQLYPGG 191
>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1 Length = 265
Score = 233 bits (594), Expect(2) = 1e-64 Identities = 123/175 (70%), Positives = 131/175 (74%), Gaps = 2/175 (1%) Frame = +1
Query: 52 SSFCGQAVLKQQGSELSRKVGA-SEARVQMK-TSKGSSSSIWYGPDRXXXXXXXXXXXXX 225 S+F GQAV K Q +E RKVG E R+ M+ T K + SIWYG DR Sbjct: 9 SAFVGQAVGKSQ-NEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPS 67
Query: 226 XXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSKNGVPFGE 405 TGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+LSKNGV FGE Sbjct: 68 YLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGE 127
Query: 406 AVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRPSG 570 AVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWA QV+LMG VEG G P G Sbjct: 128 AVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLG 182
Score = 34.3 bits (77), Expect(2) = 1e-64 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ D IYPGG Sbjct: 174 YRVGGGPLGEGLDKIYPGG 192
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1 Length = 263
Score = 233 bits (593), Expect(2) = 2e-64 Identities = 122/183 (66%), Positives = 136/183 (74%), Gaps = 3/183 (1%) Frame = +1
Query: 31 MASTTL--SSSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXX 201 MA++ L ++SF G A + EL R+VG S R+ M+ T K + SIWYGPDR Sbjct: 1 MAASALHQTTSFLGTAPRRD---ELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLG 57
Query: 202 XXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLS 381 TGEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+LS Sbjct: 58 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILS 117
Query: 382 KNGVPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRR 561 KNGV FGEAVWFKAG+QIFSEGGLDYLGNP LVHAQSILAIWA QV+LMG VEG G Sbjct: 118 KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGG 177
Query: 562 PSG 570 P G Sbjct: 178 PLG 180
Score = 33.9 bits (76), Expect(2) = 2e-64 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ D +YPGG Sbjct: 172 YRVGGGPLGEGLDKVYPGG 190
Score = 30.4 bits (67), Expect = 7.3 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +1
Query: 241 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSKNG 390 +PG +D GL+ DP+TFA+ + E+ + R AM G +++ G Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1 Length = 263
Score = 233 bits (593), Expect(2) = 2e-64 Identities = 122/183 (66%), Positives = 136/183 (74%), Gaps = 3/183 (1%) Frame = +1
Query: 31 MASTTL--SSSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXX 201 MA++ L ++SF G A + EL R+VG S R+ M+ T K + SIWYGPDR Sbjct: 1 MAASALHQTTSFLGTAPRRD---ELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLG 57
Query: 202 XXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLS 381 TGEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+LS Sbjct: 58 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILS 117
Query: 382 KNGVPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRR 561 KNGV FGEAVWFKAG+QIFSEGGLDYLGNP LVHAQSILAIWA QV+LMG VEG G Sbjct: 118 KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGG 177
Query: 562 PSG 570 P G Sbjct: 178 PLG 180
Score = 33.9 bits (76), Expect(2) = 2e-64 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ D +YPGG Sbjct: 172 YRVGGGPLGEGLDKVYPGG 190
Score = 30.4 bits (67), Expect = 7.3 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +1
Query: 241 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSKNG 390 +PG +D GL+ DP+TFA+ + E+ + R AM G +++ G Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1 Length = 264
Score = 244 bits (623), Expect = 2e-64 Identities = 127/188 (67%), Positives = 137/188 (72%), Gaps = 1/188 (0%) Frame = +1
Query: 34 ASTTLSSSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXXXXX 210 AS SS+F GQ LKQ+ EL RKVG S+ R M+ T K SIWYG DR Sbjct: 3 ASAIQSSAFAGQTALKQR-DELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFS 61
Query: 211 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSKNG 390 TGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC+ PELLSKNG Sbjct: 62 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNG 121
Query: 391 VPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRPSG 570 V FGEAVWFKAG+QIFSEGGLDYLGNP LVHAQSILAIWA QV+LMG +EG G P G Sbjct: 122 VQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLG 181
Query: 571 *RVGPHLP 594 + P P Sbjct: 182 EGLDPLYP 189
Score = 36.6 bits (83), Expect = 0.10 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ DP+YPGG Sbjct: 173 YRVGGGPLGEGLDPLYPGG 191
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1 Length = 265
Score = 232 bits (591), Expect(2) = 3e-64 Identities = 121/180 (67%), Positives = 131/180 (72%), Gaps = 2/180 (1%) Frame = +1
Query: 37 STTLSSSFCGQAVLKQQGSELSRKVGA-SEARVQMK-TSKGSSSSIWYGPDRXXXXXXXX 210 S S+F GQ LK Q +EL RK+G+ R M+ T K + SIWYG DR Sbjct: 4 SAIQQSAFAGQTALKSQ-NELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFS 62
Query: 211 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSKNG 390 TGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+LSKNG Sbjct: 63 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 122
Query: 391 VPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRPSG 570 V FGEAVWFKAGSQIFSEGGLDYLGNP L+HAQSILAIWA QV+LMG VEG G P G Sbjct: 123 VTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLG 182
Score = 34.3 bits (77), Expect(2) = 3e-64 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ D IYPGG Sbjct: 174 YRVGGGPLGEGLDKIYPGG 192
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1 Length = 265
Score = 232 bits (591), Expect(2) = 3e-64 Identities = 120/183 (65%), Positives = 136/183 (74%), Gaps = 3/183 (1%) Frame = +1
Query: 31 MASTTLS-SSFCGQAVLKQQGSELSRKVGA-SEARVQMK-TSKGSSSSIWYGPDRXXXXX 201 MA++ + S+F GQ LK Q +EL RK+G+ + R M+ T K + SIWYG DR Sbjct: 1 MATSAIEQSAFAGQTALKSQ-NELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLG 59
Query: 202 XXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLS 381 TGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+LS Sbjct: 60 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILS 119
Query: 382 KNGVPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRR 561 KNGV FGEAVWFKAGSQIFSEGGLDYLGNP L+HAQSILA+WA QV+LMG +EG G Sbjct: 120 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGG 179
Query: 562 PSG 570 P G Sbjct: 180 PLG 182
Score = 34.3 bits (77), Expect(2) = 3e-64 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ D IYPGG Sbjct: 174 YRVGGGPLGEGLDKIYPGG 192
>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1 Length = 266
Score = 241 bits (615), Expect = 2e-63 Identities = 121/190 (63%), Positives = 139/190 (73%), Gaps = 1/190 (0%) Frame = +1
Query: 28 AMASTTLSSSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXXX 204 A AS SSS GQ +L+ Q +EL +KVG ++AR+ M+ T + + SIWYGPDR Sbjct: 2 ATASAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGP 61
Query: 205 XXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSK 384 TGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELL+K Sbjct: 62 FSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAK 121
Query: 385 NGVPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRP 564 NG+ FGEAVWFKAG+QIFSEGGLDY GNP L+HAQSILAIWA QV+LMG +EG G Sbjct: 122 NGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGT 181
Query: 565 SG*RVGPHLP 594 G + P LP Sbjct: 182 LGEGLDPLLP 191
Score = 30.4 bits (67), Expect = 7.3 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GG LG+ DP+ PGG Sbjct: 175 YRVGGGTLGEGLDPLLPGG 193
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2 Length = 265
Score = 238 bits (607), Expect = 2e-62 Identities = 126/188 (67%), Positives = 136/188 (72%), Gaps = 2/188 (1%) Frame = +1
Query: 37 STTLSSSFCGQAVLKQQGSELSRKVGA-SEARVQMK-TSKGSSSSIWYGPDRXXXXXXXX 210 S S+F GQ LKQ +EL K+GA RV M+ T K + +SIWYGPDR Sbjct: 4 SAIQQSAFAGQTALKQS-NELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFS 62
Query: 211 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSKNG 390 TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+LSKNG Sbjct: 63 DQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNG 122
Query: 391 VPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRPSG 570 V FGEAVWFKAGSQIFSEGGLDYLGNP L+HAQSILAIWA QV+LMG VEG G P G Sbjct: 123 VKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLG 182
Query: 571 *RVGPHLP 594 + P P Sbjct: 183 EGLDPIYP 190
Score = 37.4 bits (85), Expect = 0.060 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ DPIYPGG Sbjct: 174 YRVGGGPLGEGLDPIYPGG 192
|
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954128|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_J21, 5' (604 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran... 243 2e-66 tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v... 241 9e-66 tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu... 240 9e-66 tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote... 238 5e-65 tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea... 249 9e-65 tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ... 238 9e-65 tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea... 248 1e-64 tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos... 236 2e-64 tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ... 248 3e-64 tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea... 248 3e-64 tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea... 247 3e-64 tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea... 246 7e-64 tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea... 246 7e-64 tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ... 233 1e-63 tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea... 245 2e-63 tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 244 4e-63 tr|Q41449|Q41449_SOLTU Chlorophyll a,b binding protein type I OS... 231 5e-63 tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti... 230 9e-63 tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 242 1e-62 tr|B0L0Y2|B0L0Y2_9POAL Chloroplast chlorophyll a/b binding prote... 230 1e-62 tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 241 3e-62 tr|A7Q0V3|A7Q0V3_VITVI Chromosome chr7 scaffold_42, whole genome... 241 3e-62 tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten... 240 5e-62 tr|A6N154|A6N154_ORYSI Chloroplast chlorophyll a-b binding prote... 228 5e-62 tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten... 239 7e-62 tr|B0L0Y1|B0L0Y1_9POAL Chloroplast chlorophyll a/b binding prote... 227 1e-61 tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ... 238 2e-61 tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant... 238 3e-61 tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b... 238 3e-61 tr|B6RAX2|B6RAX2_BAMOL Light-harvesting chlorophyll a/b binding ... 226 3e-61
>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1 Length = 264
Score = 243 bits (619), Expect(2) = 2e-66 Identities = 123/179 (68%), Positives = 135/179 (75%), Gaps = 1/179 (0%) Frame = +1
Query: 37 STTLSSSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXXXXXX 213 ST S+F GQ +LKQQ +EL RKVG + R M+ T K + SIWYGPDR Sbjct: 4 STIQQSAFVGQTLLKQQ-NELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSE 62
Query: 214 XXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSKNGV 393 TGEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+LSKNGV Sbjct: 63 QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGV 122
Query: 394 PFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRPSG 570 FGEAVWFKAGSQIF EGGLDYLGNP L+HAQSILAIWA QV+LMG +EG G P G Sbjct: 123 KFGEAVWFKAGSQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLG 181
Score = 34.3 bits (77), Expect(2) = 2e-66 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ D IYPGG Sbjct: 173 YRVGGGPLGEGLDKIYPGG 191
>tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta vulgaris subsp. vulgaris PE=2 SV=1 Length = 264
Score = 241 bits (615), Expect(2) = 9e-66 Identities = 122/179 (68%), Positives = 133/179 (74%), Gaps = 1/179 (0%) Frame = +1
Query: 37 STTLSSSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXXXXXX 213 ST S+F GQ +LK Q +EL RK G + R M+ T K + SIWYGPDR Sbjct: 4 STIQQSAFAGQTILKPQ-NELVRKFGGNGGRASMRRTVKSAPQSIWYGPDRPKYLGPFSE 62
Query: 214 XXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSKNGV 393 TGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+LSKNGV Sbjct: 63 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGV 122
Query: 394 PFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRPSG 570 FGEAVWFKAGSQIF EGGLDYLGNP L+HAQSILAIWA QV+LMG +EG G P G Sbjct: 123 KFGEAVWFKAGSQIFQEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLG 181
Score = 33.5 bits (75), Expect(2) = 9e-66 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ D +YPGG Sbjct: 173 YRVGGGPLGEGLDKLYPGG 191
>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1 Length = 264
Score = 240 bits (613), Expect(2) = 9e-66 Identities = 124/182 (68%), Positives = 138/182 (75%), Gaps = 2/182 (1%) Frame = +1
Query: 31 MASTTLS-SSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXXX 204 MA++ L S+F GQ LKQQ +EL R+VG+S R M+ T+ + SIWYGPDR Sbjct: 1 MATSALQQSAFAGQTALKQQ-NELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGP 59
Query: 205 XXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSK 384 TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+K Sbjct: 60 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAK 119
Query: 385 NGVPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRP 564 NGV FGEAVWFKAG+QIFSEGGLDYLGNP L+HAQSILAIWA QV+LMG VEG G P Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 179
Query: 565 SG 570 G Sbjct: 180 LG 181
Score = 34.3 bits (77), Expect(2) = 9e-66 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ D IYPGG Sbjct: 173 YRVGGGPLGEGLDAIYPGG 191
>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein OS=Pachysandra terminalis PE=2 SV=1 Length = 264
Score = 238 bits (606), Expect(2) = 5e-65 Identities = 122/182 (67%), Positives = 136/182 (74%), Gaps = 2/182 (1%) Frame = +1
Query: 31 MASTTLS-SSFCGQAVLKQQGSELSRKVGASEARVQM-KTSKGSSSSIWYGPDRXXXXXX 204 MA++ L S+ G+ LKQQ +EL +KVG R+ M +T K + SIWYGPDR Sbjct: 1 MATSALQQSALAGRTALKQQ-NELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGP 59
Query: 205 XXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSK 384 TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+LSK Sbjct: 60 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 119
Query: 385 NGVPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRP 564 NGV FGEAVWFKAG+QIFSEGGLDYLGNP L+HAQSILAIWA QV+LMG +EG G P Sbjct: 120 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGP 179
Query: 565 SG 570 G Sbjct: 180 LG 181
Score = 34.3 bits (77), Expect(2) = 5e-65 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ D IYPGG Sbjct: 173 YRVGGGPLGEGLDSIYPGG 191
>tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 266
Score = 249 bits (636), Expect = 9e-65 Identities = 126/190 (66%), Positives = 141/190 (74%), Gaps = 1/190 (0%) Frame = +1
Query: 28 AMASTTLSSSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXXX 204 A AS SS GQ +L+ Q +EL KVGAS+AR+ M+ T + + SIWYGPDR Sbjct: 2 ATASAIQISSLAGQTLLRPQQNELVSKVGASQARITMRRTVRSAPESIWYGPDRPKYLGP 61
Query: 205 XXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSK 384 TGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL+K Sbjct: 62 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 121
Query: 385 NGVPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRP 564 GV FGEAVWFKAG+QIFSEGGLDYLGNP L+HAQSILAIWAFQV+LMG +EG G P Sbjct: 122 TGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAFQVVLMGLIEGYRVGGGP 181
Query: 565 SG*RVGPHLP 594 G + P P Sbjct: 182 LGEGLDPLYP 191
Score = 36.6 bits (83), Expect = 1.2 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ DP+YPGG Sbjct: 175 YRVGGGPLGEGLDPLYPGG 193
>tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex palustris GN=CAB1 PE=2 SV=1 Length = 264
Score = 238 bits (606), Expect(2) = 9e-65 Identities = 125/180 (69%), Positives = 133/180 (73%), Gaps = 1/180 (0%) Frame = +1
Query: 34 ASTTLSSSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXXXXX 210 AS S+ GQ LK Q +EL RKVG + R M+ T K + SIWYGPDR Sbjct: 3 ASGIQFSAIAGQTALKPQ-NELVRKVGGNGGRFFMRRTVKSAPQSIWYGPDRPKYLGPFS 61
Query: 211 XXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSKNG 390 TGEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PELLSKNG Sbjct: 62 EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLSKNG 121
Query: 391 VPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRPSG 570 V FGEAVWFKAGSQIFSEGGLDYLGNP LVHAQSILAIWA QV+LMG VEG G P G Sbjct: 122 VQFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLG 181
Score = 33.5 bits (75), Expect(2) = 9e-65 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ D +YPGG Sbjct: 173 YRVGGGPLGEDLDKLYPGG 191
>tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 266
Score = 248 bits (634), Expect = 1e-64 Identities = 126/190 (66%), Positives = 140/190 (73%), Gaps = 1/190 (0%) Frame = +1
Query: 28 AMASTTLSSSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXXX 204 A AS SSS GQ +L+ Q +EL RKVG S+AR+ M+ T + + SIWYGPDR Sbjct: 2 AAASAIQSSSLAGQTLLRPQHNELVRKVGMSQARITMRRTVRSAPESIWYGPDRPKYLGP 61
Query: 205 XXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSK 384 TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL+K Sbjct: 62 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAK 121
Query: 385 NGVPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRP 564 GV FGEAVWFKAG+QIFSEGGLDYLGNP L+HAQSILAIWA QV+LMG +EG G P Sbjct: 122 TGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP 181
Query: 565 SG*RVGPHLP 594 G + P P Sbjct: 182 LGEGLDPLYP 191
Score = 36.6 bits (83), Expect = 1.2 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ DP+YPGG Sbjct: 175 YRVGGGPLGEGLDPLYPGG 193
>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome chr12 scaffold_47, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1 Length = 265
Score = 236 bits (602), Expect(2) = 2e-64 Identities = 125/183 (68%), Positives = 136/183 (74%), Gaps = 3/183 (1%) Frame = +1
Query: 31 MASTTLS-SSFCGQAVLKQQGSELSRKVGA-SEARVQMK-TSKGSSSSIWYGPDRXXXXX 201 MA++ + S+F GQ LKQ +EL RKVG R+ M+ T K + SIWYGPDR Sbjct: 1 MATSAIQRSAFAGQTALKQP-NELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLG 59
Query: 202 XXXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLS 381 TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+LS Sbjct: 60 PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILS 119
Query: 382 KNGVPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRR 561 KNGV FGEAVWFKAG+QIFSEGGLDYLGNP LVHAQSILAIWA QV+LMG VEG G Sbjct: 120 KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGG 179
Query: 562 PSG 570 P G Sbjct: 180 PLG 182
Score = 34.3 bits (77), Expect(2) = 2e-64 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ D IYPGG Sbjct: 174 YRVGGGPLGEGLDAIYPGG 192
>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii GN=cab PE=4 SV=1 Length = 266
Score = 248 bits (632), Expect = 3e-64 Identities = 124/190 (65%), Positives = 141/190 (74%), Gaps = 1/190 (0%) Frame = +1
Query: 28 AMASTTLSSSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXXX 204 A AS SSS GQ +L+ Q +EL +KVG ++AR+ M+ T + + SIWYGPDR Sbjct: 2 ATASAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGP 61
Query: 205 XXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSK 384 TGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+ PELL+K Sbjct: 62 FSEGTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAK 121
Query: 385 NGVPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRP 564 NGV FGEAVWFKAG+QIFSEGGLDYLGNP L+HAQSILAIWA QV+LMG +EG G P Sbjct: 122 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGP 181
Query: 565 SG*RVGPHLP 594 G + P P Sbjct: 182 LGEGLDPLYP 191
Score = 36.6 bits (83), Expect = 1.2 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ DP+YPGG Sbjct: 175 YRVGGGPLGEGLDPLYPGG 193
>tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 266
Score = 248 bits (632), Expect = 3e-64 Identities = 125/190 (65%), Positives = 141/190 (74%), Gaps = 1/190 (0%) Frame = +1
Query: 28 AMASTTLSSSFCGQAVLKQQGSELSRKVGASEARVQMK-TSKGSSSSIWYGPDRXXXXXX 204 A AS SSS GQ +L+ +EL +KVGAS+AR+ M+ T + + SIWYGPDR Sbjct: 2 ATASAIQSSSLAGQTLLRPHQNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGP 61
Query: 205 XXXXXXXXXTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLSK 384 TGEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELL+K Sbjct: 62 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 121
Query: 385 NGVPFGEAVWFKAGSQIFSEGGLDYLGNPGLVHAQSILAIWAFQVILMGAVEGLPSGRRP 564 GV FGEAVWFKAG+QIFSEGGLDYLGNP L+HAQSILAIWA QV+LMG +EG G P Sbjct: 122 TGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGP 181
Query: 565 SG*RVGPHLP 594 G + P P Sbjct: 182 LGEGLDPLYP 191
Score = 36.6 bits (83), Expect = 1.2 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +2
Query: 545 YRVAGGPLGDVSDPIYPGG 601 YRV GGPLG+ DP+YPGG Sbjct: 175 YRVGGGPLGEGLDPLYPGG 193
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