DK954164 |
Clone id |
TST39A01NGRL0019_L13 |
Library |
TST39 |
Length |
558 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_L13. 5' end sequence. |
Accession |
DK954164 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL42Contig1 |
Sequence |
CCACGTGCCATCGTGATTTAGTTCGAGCTACCGTAATTCGGTCTTGTAGATCACTACAGA ATTTCCGTATCGACGCGAGGTTTTGGGACACAGCAGATCTCTCTCGTTCTACTTCAGATC TGTGTCCAGGAGCTAAGCGAGCTCAGGATTGATGGAGAATATTTATTCTTTCTGGAGTCT AAATGACAATAATCGGCGCTCTCCCACTGAGATGCAAGAGGATCAAAGCTGGAAAGTAGC AGCTACCAAGCTTGCTTTTGCGGATCAGATGAGGCTGAAGTTTGATAGGTCTAGATCTGA TGCGAAGGTTGTGGCCCCTCATGAGAAGAACATTAAACAAGCAAAGGGACGATCCAAGGG CAGAGCTGAAGACATGCTGAAGGGGGAAGGTTTCAACCAGAAGTTTTCGGATGGGGATTT GAGATATGGAGATTTGGGTCAGAAGCTTGGAGCAGGTAACATGTCAACATCACAGATTGT TTGGCAGTGCAGATAAACGATTCAAGTCTCTTCCGCCTGCTGAAAACACTTCCTAGACAC GAAACTTTGGGGTGGCTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q15UD3 |
Definition |
sp|Q15UD3|DNAK_PSEA6 Chaperone protein dnaK OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) |
Align length |
99 |
Score (bit) |
32.0 |
E-value |
2.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NP04 |
Definition |
tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
75 |
Score (bit) |
41.2 |
E-value |
0.038 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954164|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_L13, 5' (558 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea... 41 0.038 tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citru... 40 0.085 tr|A3BAD5|A3BAD5_ORYSJ Putative uncharacterized protein OS=Oryza... 37 0.94 tr|A2YBD8|A2YBD8_ORYSI Putative uncharacterized protein OS=Oryza... 37 0.94 tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solan... 36 1.6 tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medic... 36 1.6 tr|Q3J402|Q3J402_RHOS4 Rod shape-determining protein MreC OS=Rho... 35 3.6 tr|A3PIE7|A3PIE7_RHOS1 Rod shape-determining protein MreC OS=Rho... 35 3.6 tr|Q70AN6|Q70AN6_RHOSH MreC protein OS=Rhodobacter sphaeroides G... 35 3.6 tr|Q8G712|Q8G712_BIFLO Putative uncharacterized protein OS=Bifid... 34 4.6 tr|B3DU84|B3DU84_BIFLD Subtilisin-like serine protease OS=Bifido... 34 4.6 tr|A4WSY0|A4WSY0_RHOS5 Rod shape-determining protein MreC OS=Rho... 34 4.6 tr|Q3T552|Q3T552_BIFLO Endo-alpha-N-acetylgalactosaminidase OS=B... 34 4.6 tr|B2C4I9|B2C4I9_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 34 4.6 tr|B2C4I3|B2C4I3_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 34 4.6 tr|B2C4I2|B2C4I2_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 34 4.6 tr|B2C4I1|B2C4I1_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 34 4.6 tr|B2C4I0|B2C4I0_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 34 4.6 tr|B2C4H8|B2C4H8_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 34 4.6 tr|B2C4H7|B2C4H7_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 34 4.6 tr|B2C4H6|B2C4H6_BIFLO EngBF (Fragment) OS=Bifidobacterium longu... 34 4.6 tr|Q231A2|Q231A2_TETTH Protein kinase domain containing protein ... 34 6.1 tr|Q6L1X3|Q6L1X3_PICTO Putative uncharacterized protein OS=Picro... 33 7.9
>tr|A9NP04|A9NP04_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 273
Score = 41.2 bits (95), Expect = 0.038 Identities = 26/75 (34%), Positives = 42/75 (56%) Frame = +2
Query: 152 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 331 M + ++FW L ++ R +E DQ+W +AA+KLA +Q R K DR S + E Sbjct: 1 MVDSFAFWQLGESLRGLSSE---DQNWTLAASKLATFEQTRGKSDRINSLEPKTSYAE-- 55
Query: 332 IKQAKGRSKGRAEDM 376 +K G+S G+ E++ Sbjct: 56 VKHRGGKSNGKLEEV 70
>tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citrus paradisi PE=2 SV=1 Length = 305
Score = 40.0 bits (92), Expect = 0.085 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Frame = +2
Query: 152 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 331 M+N++SFW L D R + EDQSW AA++L A+Q R K +R N Sbjct: 1 MDNMHSFWQLGD-ELRGQSRTSEDQSWLRAASRL--AEQTRFKGERM-----------NN 46
Query: 332 IKQAKGRSKGRAEDML------KGEGFNQKFS 409 + +KG ++ R D + E FN F+ Sbjct: 47 LDLSKGMTEIRPRDKIMYHEDNNFESFNFNFN 78
>tr|A3BAD5|A3BAD5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_020007 PE=4 SV=1 Length = 272
Score = 36.6 bits (83), Expect = 0.94 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Frame = +2
Query: 326 KNIKQAKGRSKGRAEDMLKGEGFNQKFSDGDLRYGDLGQKLGAGNMS-TSQIVWQ 487 KN + ++GR +GR++ +G G Q+FS G R G G G+ + T IVW+ Sbjct: 14 KNNRNSRGRGRGRSQGGGRGRGDGQRFSYGSGRGRGAGTFRGRGSFNKTKDIVWR 68
>tr|A2YBD8|A2YBD8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22414 PE=4 SV=1 Length = 272
Score = 36.6 bits (83), Expect = 0.94 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Frame = +2
Query: 326 KNIKQAKGRSKGRAEDMLKGEGFNQKFSDGDLRYGDLGQKLGAGNMS-TSQIVWQ 487 KN + ++GR +GR++ +G G Q+FS G R G G G+ + T IVW+ Sbjct: 14 KNNRNSRGRGRGRSQGGGRGRGDGQRFSYGSGRGRGAGTFRGRGSFNKTKDIVWR 68
>tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 298
Score = 35.8 bits (81), Expect = 1.6 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Frame = +2
Query: 152 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLA----FADQMRLKFDRSRSDAKV 310 MEN+ S+W D R ++ ED W AA KL+ + + R D S+S A++ Sbjct: 1 MENMQSYWQFGD-ELRGQSKASEDHKWSTAALKLSEQMKYKGERRNNLDLSKSSAEI 56
>tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 302
Score = 35.8 bits (81), Expect = 1.6 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 2/111 (1%) Frame = +2
Query: 152 MENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKN 331 M+N++SFW L D R ++ ED W + A+KLA + R K +R N Sbjct: 1 MDNMHSFWQLGD-ELRGHSKASEDHKWLMVASKLA---EQRSKAERF-----------NN 45
Query: 332 IKQAKGRSKGRAEDMLKGEGFNQ--KFSDGDLRYGDLGQKLGAGNMSTSQI 478 + +KG + R D GF + KF +L +L K NMS S + Sbjct: 46 LDLSKGPLETRPRDKF---GFQEENKFDTLNLSMLNLDSKF-TENMSKSSL 92
>tr|Q3J402|Q3J402_RHOS4 Rod shape-determining protein MreC OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=mreC PE=4 SV=1 Length = 300
Score = 34.7 bits (78), Expect = 3.6 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 2/115 (1%) Frame = +2
Query: 143 SGLMENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPH 322 +G++EN S+ + + N+ E+Q+ ++WK AA +L + L ++ R D K+ H Sbjct: 67 AGMVENFQSYTRIYEQNQELRRELQQMKAWKEAALQLEQKNARLLDLNQVRLDPKLT--H 124
Query: 323 EKNIKQAKGRSKGRAEDMLKGEGFNQKFSDGDLRYGDLG--QKLGAGNMSTSQIV 481 + A S R + +L G DG +G ++ +TS+++ Sbjct: 125 VTGVVLADSGSPFR-QSVLLNVGARDGIRDGWATMDGIGLVGRISGVGRTTSRVI 178
>tr|A3PIE7|A3PIE7_RHOS1 Rod shape-determining protein MreC OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=Rsph17029_1002 PE=4 SV=1 Length = 300
Score = 34.7 bits (78), Expect = 3.6 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 2/115 (1%) Frame = +2
Query: 143 SGLMENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPH 322 +G++EN S+ + + N+ E+Q+ ++WK AA +L + L ++ R D K+ H Sbjct: 67 AGMVENFQSYTRIYEQNQELRRELQQMKAWKEAALQLEQKNARLLDLNQVRLDPKLT--H 124
Query: 323 EKNIKQAKGRSKGRAEDMLKGEGFNQKFSDGDLRYGDLG--QKLGAGNMSTSQIV 481 + A S R + +L G DG +G ++ +TS+++ Sbjct: 125 VTGVVLADSGSPFR-QSVLLNVGARDGIRDGWATMDGIGLVGRISGVGRTTSRVI 178
>tr|Q70AN6|Q70AN6_RHOSH MreC protein OS=Rhodobacter sphaeroides GN=mreC PE=4 SV=1 Length = 300
Score = 34.7 bits (78), Expect = 3.6 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 2/115 (1%) Frame = +2
Query: 143 SGLMENIYSFWSLNDNNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPH 322 +G++EN S+ + + N+ E+Q+ ++WK AA +L + L ++ R D K+ H Sbjct: 67 AGMVENFQSYTRIYEQNQELRRELQQMKAWKEAALQLEQKNARLLDLNQVRLDPKLT--H 124
Query: 323 EKNIKQAKGRSKGRAEDMLKGEGFNQKFSDGDLRYGDLG--QKLGAGNMSTSQIV 481 + A S R + +L G DG +G ++ +TS+++ Sbjct: 125 VTGVVLADSGSPFR-QSVLLNVGARDGIRDGWATMDGIGLVGRISGVGRTTSRVI 178
>tr|Q8G712|Q8G712_BIFLO Putative uncharacterized protein OS=Bifidobacterium longum GN=BL0464 PE=4 SV=1 Length = 1966
Score = 34.3 bits (77), Expect = 4.6 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 1/95 (1%) Frame = +2
Query: 188 NNRRSPTEMQEDQSWKVAATKLAFADQMRLKFDRSRSDAKVVAPHEKNIKQAKGRSKGRA 367 NN E+ E +W++A + F Q + F + + K VA + + Q+ Sbjct: 622 NNPYKSEEVPELVAWRIA---MNFGSQAQNPFLTTLDNVKKVALNTDGLGQSV------- 671
Query: 368 EDMLKGEGFNQKFSDGDLRYGDLGQKL-GAGNMST 469 +LKG G N+ G YGD+GQ+L GA +M+T Sbjct: 672 --LLKGYG-NEGHDSGHPDYGDIGQRLGGADDMNT 703
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