DK954190
Clone id TST39A01NGRL0019_M15
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_M15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AGAAGGTAGCCATAGCCAACACCAGACAGTTTCGGCATCGAGGAAGCTCTTCTTTTAGTG
GGTTTTCAGGAGTCAAGAGTGATTATCAAAGATTAGCGGGTAATTAATCTCTGCATTCCC
TGCATCATCATGCAAGGCGCAGCGCTGCTCACTAGCCCCGCTGCCACTGCTGCTGCATTG
ACTCCCTGTGCTGCATTCCTGCGCTACACCTCCACAAATGTGAGGTGTACCAGTCCCCTC
CCCTTGTTTTCTTCAAGATCTCTGCAACAGAAGCGGCGCCCACTTCTTCGTGCACAGCAA
CAAGATCAGGATTATGTTACCTACGATGCGAAGAAATCGGTTTTCCCTGCTGAGGCTTGT
GAAGAGCTCGGTGGTGAAGCATGTGAAGTTGATGGTGTTGGCCCTGAGGTGAAGGGCTCT
GCCTCTGCTCCCAAGCAACAATCTTCGTCGAAGGCTGGGAGTGGTCCGGATCGGGAGTAC
GTGGATTACAAGGAAAACAAGACTTGTCTTTCCTGGAGAGGGCTTGCGATGACCTCGGAG
GGTGAGTTTTGCGAGCCCA
■■Homology search results ■■ -
sp_hit_id O95817
Definition sp|O95817|BAG3_HUMAN BAG family molecular chaperone regulator 3 OS=Homo sapiens
Align length 44
Score (bit) 31.2
E-value 3.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954190|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_M15, 5'
(559 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O95817|BAG3_HUMAN BAG family molecular chaperone regulator 3 ... 31 3.6
sp|P78423|X3CL1_HUMAN Fractalkine OS=Homo sapiens GN=CX3CL1 PE=1... 30 8.1

>sp|O95817|BAG3_HUMAN BAG family molecular chaperone regulator 3
OS=Homo sapiens GN=BAG3 PE=1 SV=3
Length = 575

Score = 31.2 bits (69), Expect = 3.6
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1

Query: 541 PPRSSQALSRKDKSCFPCNPRTPDPDHSQPSTKIVAWEQRQSPS 410
PP S + + + PC P +P P S K VA E+R +PS
Sbjct: 356 PPPSEKVEVKVPPAPVPCPPPSPGPSAVPSSPKSVATEERAAPS 399


>sp|P78423|X3CL1_HUMAN Fractalkine OS=Homo sapiens GN=CX3CL1 PE=1
SV=1
Length = 397

Score = 30.0 bits (66), Expect = 8.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1

Query: 535 RSSQALSRKDKSCFPCNPRTPDPDHSQPSTKIVAWEQRQSPSP 407
++S+A S +D S +P P+ + PS W Q QSP P
Sbjct: 214 KTSEAPSTQDPSTQASTASSPAPEENAPSEGQRVWGQGQSPRP 256


tr_hit_id Q0D831
Definition tr|Q0D831|Q0D831_ORYSJ Os07g0187900 protein (Fragment) OS=Oryza sativa subsp. japonica
Align length 50
Score (bit) 37.0
E-value 0.73
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK954190|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_M15, 5'
(559 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0D831|Q0D831_ORYSJ Os07g0187900 protein (Fragment) OS=Oryza ... 37 0.73
tr|Q82KY9|Q82KY9_STRAW Putative protoporphyrinogen oxidase OS=St... 33 8.1
tr|B8ML27|B8ML27_9EURO Peptidase family M20/M25/M40 protein OS=T... 33 8.1

>tr|Q0D831|Q0D831_ORYSJ Os07g0187900 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os07g0187900 PE=4 SV=1
Length = 253

Score = 37.0 bits (84), Expect = 0.73
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1

Query: 556 ARKTHPPRSS-QALSRKDKSCFPCNPRTPDPDHSQPSTKIVAWEQRQSPS 410
AR T PP SS AL+R +SC P +PR + ST AW +P+
Sbjct: 77 ARSTPPPSSSASALARSGRSCSPSSPRCSASSTTPRSTTSAAWRAPSAPT 126


>tr|Q82KY9|Q82KY9_STRAW Putative protoporphyrinogen oxidase
OS=Streptomyces avermitilis GN=SAV2223 PE=4 SV=1
Length = 474

Score = 33.5 bits (75), Expect = 8.1
Identities = 27/76 (35%), Positives = 29/76 (38%)
Frame = -1

Query: 547 THPPRSSQALSRKDKSCFPCNPRTPDPDHSQPSTKIVAWEQRQSPSPXXXXXXXXXXXXX 368
T P SS R SC C PR P P S P++ W R SPSP
Sbjct: 276 TPTPWSSPCPPRPPPSC--CAPRHPPPRPSWPASSTRPW--RWSPSPTAAVGPASPKAAA 331

Query: 367 XXHKPQQGKPISSHRR 320
P G P S HRR
Sbjct: 332 SSCLPSTGAP-SRHRR 346


>tr|B8ML27|B8ML27_9EURO Peptidase family M20/M25/M40 protein
OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_048830 PE=4
SV=1
Length = 1006

Score = 33.5 bits (75), Expect = 8.1
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = -1

Query: 553 RKTHPPRSSQALSRKDKSCFPCN----PRTPDPDHSQPSTKIVAWEQRQSPSP 407
R THPP S S + K+ P + P+TP D S+ ++ I+ Q Q SP
Sbjct: 785 RSTHPPTSEDPSSLQSKASTPTSSPRTPQTPREDSSRRNSYIMPQPQSQQTSP 837