DK954205 |
Clone id |
TST39A01NGRL0019_N06 |
Library |
TST39 |
Length |
627 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_N06. 5' end sequence. |
Accession |
DK954205 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL201Contig1 |
Sequence |
AATTAGCGAAGCCAGGTGAAGTCCAAACACAGACACGCACAGACAGAAGGAGGTTTCTAC GAGCGAGTGAGCAACGTGTCCATGGCTGCCTCAACCTCTGCTGCTCTCTCCTTCTCAAAC TTGGCGGCCGCGCGCTCCTCCTCCCTCACAGGTTCCCCTTTGAGCTCCACGAGGACACCT GCAAATGTGAAGACTCAGGCCCCCTTGACATGCCGAGCCCAGAAAGCTTCAGATGGGGAG GCCCCTGCGGCGCCTATCTCTAGACGTGCTGTGATCTCCATAGCCGCCGCTGCTGCAGCT GCTGTTGCTGCCGTCTCCGCGCCCATTTACCCCGCGGAGGCAGCATATGGTGAATCAGCA AATATCTTTGGTGCTCCCAAGTTTGACTCGGGGTTTGTTCCCTTCTCTGGCAATGGCTTC TCTGTAAATATTCCATCAAAGTGGAACCCTAGCAAGGAGCAAGAGTTCCCTGGCACTGTA TTGCGCTATGAGGACAATTTTGATGCAAACAGCAACTTGGCAGTTATGGTTTTACCAGAA GGCAAGACCTCAATCAAGGACTACGGATCACCGGAGAAGTTTTTGGAATCTGTGTCGTAC CTTCTGGGCAAGCAAGCCTACAGTGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SLQ8 |
Definition |
sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus |
Align length |
97 |
Score (bit) |
149.0 |
E-value |
2.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954205|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_N06, 5' (627 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chlorop... 149 2e-35 sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chlo... 144 5e-34 sp|P12302|PSBP_SPIOL Oxygen-evolving enhancer protein 2, chlorop... 143 8e-34 sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chlorop... 142 2e-33 sp|P11594|PSBP_SINAL Oxygen-evolving enhancer protein 2, chlorop... 142 2e-33 sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chlorop... 141 2e-33 sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chlorop... 140 4e-33 sp|Q96334|PSBP_BRAJU Oxygen-evolving enhancer protein 2, chlorop... 140 7e-33 sp|O49080|PSBP_FRIAG Oxygen-evolving enhancer protein 2, chlorop... 139 1e-32 sp|Q04127|PSBP3_TOBAC Oxygen-evolving enhancer protein 2-3, chlo... 137 6e-32 sp|P18212|PSBP2_TOBAC Oxygen-evolving enhancer protein 2-2, chlo... 137 6e-32 sp|Q7DM39|PSBP1_TOBAC Oxygen-evolving enhancer protein 2-1, chlo... 137 6e-32 sp|P16059|PSBP_PEA Oxygen-evolving enhancer protein 2, chloropla... 135 2e-31 sp|P11471|PSBP_CHLRE Oxygen-evolving enhancer protein 2, chlorop... 135 2e-31 sp|Q00434|PSBP_WHEAT Oxygen-evolving enhancer protein 2, chlorop... 134 4e-31 sp|O49344|PSBP2_ARATH Putative oxygen-evolving enhancer protein ... 51 6e-06 sp|P80660|PSBP1_PHYPA Oxygen-evolving enhancer protein 2 (Fragme... 39 0.017 sp|P83687|PSBP_EUGGR Oxygen-evolving enhancer protein 2 (Fragmen... 31 4.6 sp|Q3URS3|YL022_MOUSE Uncharacterized protein LOC645277 homolog ... 31 5.9
>sp|Q9SLQ8|PSBP_CUCSA Oxygen-evolving enhancer protein 2, chloroplastic OS=Cucumis sativus GN=PSBP PE=2 SV=1 Length = 263
Score = 149 bits (375), Expect = 2e-35 Identities = 66/97 (68%), Positives = 84/97 (86%) Frame = +1
Query: 337 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 516 +AAYGE+AN+FG PK ++ ++P+SG+GF ++IPSKWNPSKE+EFPG VLRYEDNFD+NSN Sbjct: 76 DAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFPGQVLRYEDNFDSNSN 135
Query: 517 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSG 627 L+V++ P K SIKD+GSPE+FL V YLLGKQAY G Sbjct: 136 LSVIINPTDKKSIKDFGSPEEFLSKVDYLLGKQAYFG 172
>sp|Q42029|PSBP1_ARATH Oxygen-evolving enhancer protein 2-1, chloroplastic OS=Arabidopsis thaliana GN=PSBP1 PE=1 SV=2 Length = 263
Score = 144 bits (362), Expect = 5e-34 Identities = 65/97 (67%), Positives = 80/97 (82%) Frame = +1
Query: 337 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 516 +AAYGE+AN+FG PK ++ F+P++G+GF V +P+KWNPSKE E+PG VLR+EDNFDA SN Sbjct: 76 DAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSN 135
Query: 517 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSG 627 L VMV P K SI DYGSPE+FL V+YLLGKQAY G Sbjct: 136 LNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFG 172
>sp|P12302|PSBP_SPIOL Oxygen-evolving enhancer protein 2, chloroplastic OS=Spinacia oleracea GN=PSBP PE=1 SV=1 Length = 267
Score = 143 bits (360), Expect = 8e-34 Identities = 65/97 (67%), Positives = 80/97 (82%) Frame = +1
Query: 337 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 516 +AAYGE+AN+FG PK ++ F+P++G+GF + +PSKWNPSKE+EFPG VLRYEDNFDA SN Sbjct: 80 DAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPSKEKEFPGQVLRYEDNFDATSN 139
Query: 517 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSG 627 L+V+V P K SI D+GSPE FL V YLLGKQAY G Sbjct: 140 LSVLVQPTDKKSITDFGSPEDFLSQVDYLLGKQAYFG 176
>sp|P93566|PSBP_SOLTU Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum tuberosum GN=PSBP PE=2 SV=1 Length = 260
Score = 142 bits (357), Expect = 2e-33 Identities = 65/97 (67%), Positives = 78/97 (80%) Frame = +1
Query: 337 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 516 +AAYGE+AN+FG PK ++ F+P++G+GF + IP+KWNPSKE EFPG VLRYEDNFD+ SN Sbjct: 73 DAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQVLRYEDNFDSTSN 132
Query: 517 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSG 627 L V V P K SI DYGSPE+FL V YLLGKQAY G Sbjct: 133 LMVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFG 169
>sp|P11594|PSBP_SINAL Oxygen-evolving enhancer protein 2, chloroplastic OS=Sinapis alba GN=PSBP PE=2 SV=2 Length = 260
Score = 142 bits (357), Expect = 2e-33 Identities = 65/97 (67%), Positives = 78/97 (80%) Frame = +1
Query: 337 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 516 +AAYGE+AN+FG PK ++ F +SG+GF V +P+KWNPS+E E+PG VLRYEDNFDA SN Sbjct: 73 DAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSN 132
Query: 517 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSG 627 L VMV P K SI DYGSPE+FL V+YLLGKQAY G Sbjct: 133 LNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFG 169
>sp|Q40407|PSBP_NARPS Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus GN=PSBP PE=2 SV=1 Length = 265
Score = 141 bits (356), Expect = 2e-33 Identities = 67/97 (69%), Positives = 76/97 (78%) Frame = +1
Query: 337 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 516 +AAYGESAN+FG PK ++ F +G+GF + IPSKWNPSKE EFPG VLRYEDNFD SN Sbjct: 78 DAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNPSKEVEFPGQVLRYEDNFDTTSN 137
Query: 517 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSG 627 + VMV P K SIKDYGSPE+FL V YLLGKQAY G Sbjct: 138 VGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYFG 174
>sp|P29795|PSBP_SOLLC Oxygen-evolving enhancer protein 2, chloroplastic OS=Solanum lycopersicum GN=PSBP PE=2 SV=1 Length = 258
Score = 140 bits (354), Expect = 4e-33 Identities = 63/97 (64%), Positives = 78/97 (80%) Frame = +1
Query: 337 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 516 +AAYGE+AN+FG PK ++ F+P++G+GF + +P+KWNPSKE E+PG VLRYEDNFD+ SN Sbjct: 71 DAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQVLRYEDNFDSTSN 130
Query: 517 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSG 627 L V V P K SI DYGSPE+FL V YLLGKQAY G Sbjct: 131 LIVAVTPTDKKSITDYGSPEEFLSKVDYLLGKQAYFG 167
>sp|Q96334|PSBP_BRAJU Oxygen-evolving enhancer protein 2, chloroplastic (Fragment) OS=Brassica juncea GN=PSBP PE=2 SV=1 Length = 217
Score = 140 bits (352), Expect = 7e-33 Identities = 64/97 (65%), Positives = 77/97 (79%) Frame = +1
Query: 337 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 516 +AAYGE+AN+FG PK ++ F +G+GF V +P+KWNPS+E E+PG VLRYEDNFDA SN Sbjct: 30 DAAYGEAANVFGKPKTNTDFTAINGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSN 89
Query: 517 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSG 627 L VMV P K SI DYGSPE+FL V+YLLGKQAY G Sbjct: 90 LNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFG 126
>sp|O49080|PSBP_FRIAG Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis GN=PSBP PE=2 SV=1 Length = 264
Score = 139 bits (350), Expect = 1e-32 Identities = 63/96 (65%), Positives = 79/96 (82%) Frame = +1
Query: 340 AAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSNL 519 AAYGE+AN+FG K ++ F+P++G+GF++ IP+KWNPSKE EFPG VLRYEDNFD SN+ Sbjct: 78 AAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVEFPGQVLRYEDNFDVTSNV 137
Query: 520 AVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSG 627 +V V P K SI DYG+PE+FL +V YLLGKQAYSG Sbjct: 138 SVTVTPTSKKSITDYGTPEEFLSTVDYLLGKQAYSG 173
>sp|Q04127|PSBP3_TOBAC Oxygen-evolving enhancer protein 2-3, chloroplastic OS=Nicotiana tabacum GN=PSBP3 PE=2 SV=1 Length = 266
Score = 137 bits (344), Expect = 6e-32 Identities = 61/97 (62%), Positives = 77/97 (79%) Frame = +1
Query: 337 EAAYGESANIFGAPKFDSGFVPFSGNGFSVNIPSKWNPSKEQEFPGTVLRYEDNFDANSN 516 +AAYGE+AN+FG PK D+ F ++G+GF + IPSKWNP+KE E+PG VLR+EDNFDA SN Sbjct: 79 DAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSN 138
Query: 517 LAVMVLPEGKTSIKDYGSPEKFLESVSYLLGKQAYSG 627 + V + P K SI D+GSPE+FL V YLLG+QAYSG Sbjct: 139 VIVAITPTDKKSITDFGSPEQFLSQVDYLLGRQAYSG 175
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SY12 |
Definition |
tr|A9SY12|A9SY12_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
96 |
Score (bit) |
153.0 |
E-value |
9.0e-36 |
Report |
|