DK954210 |
Clone id |
TST39A01NGRL0019_N11 |
Library |
TST39 |
Length |
583 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_N11. 5' end sequence. |
Accession |
DK954210 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2941Contig1 |
Sequence |
CTCGATGTTTTCACGCTTGGCGACAAGGAATCAAGCTCGCCTCCCCTCCTCGCTTCAGCG AACAATACCTTTGATTGCGCCGCTGTCTGCTGCATTCACCATTCACTCAAAGGATTCCTC AAGTTTTCCATGGCTGAATCCCTTGTCTTGTCTTTCTCGTCAATCGGGATCTCAAAACGG GGTACTCCTTTGCAGCTTTCACAACAGGTTTTGAATTACCACCAAGCTTTCTGGGGCAGG CCTGTAAAGAAGCAAGAGCTCACGCTTTCAGTACCTAATTGCCAAGGCCATCATATTTGC GCAGCAGTTCAGACAGCTGACTACACTGAACTCGATGCTATTTCAAAATTTAGTGAGATA GTTCCTGACACAGTTATTTTTGATGATTTTGAAAGGCTTGCTCCTACTGCAGCTACAGTC AGCTCATCACTTCTTCTTGGGATCACAAGCGTACCAAAAACAAAGTTTAATAGTGCTATT GAGACAGCATTAGCGTACAATGAGTGCTACCTGAAGGGATACAATTGAAAGCCGACTTTC TTGCTTTACTGATAAGGCCCCTTGTGAATGTAGGGAGTATTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A4XTM7 |
Definition |
sp|A4XTM7|TAL_PSEMY Transaldolase OS=Pseudomonas mendocina (strain ymp) |
Align length |
44 |
Score (bit) |
34.3 |
E-value |
0.47 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TQS8 |
Definition |
tr|A9TQS8|A9TQS8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
78 |
Score (bit) |
112.0 |
E-value |
2.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954210|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_N11, 5' (583 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TQS8|A9TQS8_PHYPA Predicted protein OS=Physcomitrella paten... 112 2e-23 tr|B4FD03|B4FD03_MAIZE Putative uncharacterized protein OS=Zea m... 100 1e-19 tr|Q84ZL6|Q84ZL6_ORYSJ Os08g0154300 protein OS=Oryza sativa subs... 97 9e-19 tr|B7ERR5|B7ERR5_ORYSJ cDNA clone:J033038K01, full insert sequen... 97 9e-19 tr|A2YRB6|A2YRB6_ORYSI Putative uncharacterized protein OS=Oryza... 97 9e-19 tr|A7QVD8|A7QVD8_VITVI Chromosome chr2 scaffold_187, whole genom... 92 2e-17 tr|Q8LGN9|Q8LGN9_ARALY Transaldolase-like protein (Fragment) OS=... 86 1e-16 tr|Q941R1|Q941R1_SOLLC Transaldolase ToTAL2 OS=Solanum lycopersi... 89 2e-16 tr|Q7XAS4|Q7XAS4_GOSHI Transaldolase OS=Gossypium hirsutum PE=2 ... 89 2e-16 tr|Q9FWX0|Q9FWX0_ARATH T28K15.4 protein (At1g12230) (Expressed p... 85 3e-16 tr|Q8L9B8|Q8L9B8_ARATH Transaldolase ToTAL2 OS=Arabidopsis thali... 85 3e-16 tr|Q8LGP6|Q8LGP6_ARATH Transaldolase-like protein (Fragment) OS=... 85 3e-16 tr|Q8LGP5|Q8LGP5_ARATH Transaldolase-like protein (Fragment) OS=... 85 3e-16 tr|Q8L4P1|Q8L4P1_ARATH Transaldolase-like protein (Fragment) OS=... 85 3e-16 tr|Q8L4P0|Q8L4P0_ARATH Transaldolase-like protein (Fragment) OS=... 85 3e-16 tr|Q8L4B7|Q8L4B7_ARATH Transaldolase-like protein (Fragment) OS=... 85 3e-16 tr|Q8L485|Q8L485_ARATH Transaldolase-like protein (Fragment) OS=... 85 3e-16 tr|Q8L456|Q8L456_ARATH Transaldolase-like protein (Fragment) OS=... 85 3e-16 tr|Q8L3R9|Q8L3R9_ARATH Transaldolase-like protein (Fragment) OS=... 85 3e-16 tr|A9P023|A9P023_PICSI Putative uncharacterized protein OS=Picea... 87 5e-16 tr|A7Q673|A7Q673_VITVI Chromosome undetermined scaffold_55, whol... 68 4e-10 tr|Q075L3|Q075L3_PROWI Plastid transaldolase 1 (Fragment) OS=Pro... 41 0.056 tr|Q0S0V1|Q0S0V1_RHOSR Probable enoyl-CoA hydratase OS=Rhodococc... 37 0.62 tr|Q3APF7|Q3APF7_CHLCH Glycosyl transferase OS=Chlorobium chloro... 36 1.4 tr|B2EJS1|B2EJS1_9BACT Transaldolase OS=bacterium Ellin514 GN=Cf... 35 2.4 tr|B1VED9|B1VED9_CORU7 Putative drug exporter of the RND superfa... 35 4.0 tr|Q2NG98|Q2NG98_METST Member of asn/thr-rich large protein fami... 34 5.2 tr|B8KXM1|B8KXM1_9GAMM Transaldolase OS=gamma proteobacterium NO... 34 6.9 tr|A0Z810|A0Z810_9GAMM Transaldolase OS=marine gamma proteobacte... 34 6.9
>tr|A9TQS8|A9TQS8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_110503 PE=4 SV=1 Length = 408
Score = 112 bits (279), Expect = 2e-23 Identities = 55/78 (70%), Positives = 67/78 (85%) Frame = +1
Query: 283 QGHHICAAVQTADYTELDAISKFSEIVPDTVIFDDFERLAPTAATVSSSLLLGITSVPKT 462 +G + A+V TA+ TELDAI K+SE+VPDTVIFDDFER PTAATVSSSLLLGITSVPK Sbjct: 60 KGLSLRASVSTAEGTELDAIRKYSEVVPDTVIFDDFERFPPTAATVSSSLLLGITSVPKG 119
Query: 463 KFNSAIETALAYNECYLK 516 +N AI++ALAYN+CY++ Sbjct: 120 SYNGAIDSALAYNKCYVE 137
>tr|B4FD03|B4FD03_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 394
Score = 99.8 bits (247), Expect = 1e-19 Identities = 55/94 (58%), Positives = 63/94 (67%), Gaps = 4/94 (4%) Frame = +1
Query: 238 RPVKKQELTLSVPNCQGHHICAAVQTADY----TELDAISKFSEIVPDTVIFDDFERLAP 405 RP K +L P+ T+ TELDA++ FSEIVPDTV+FDDFER AP Sbjct: 26 RPPKPATFSLRRPHLAARAAAGNAPTSPVREVVTELDAVAGFSEIVPDTVVFDDFERFAP 85
Query: 406 TAATVSSSLLLGITSVPKTKFNSAIETALAYNEC 507 TAATVSSSLLLGIT +P TKF SAI+TALA EC Sbjct: 86 TAATVSSSLLLGITGLPDTKFKSAIDTALADGEC 119
>tr|Q84ZL6|Q84ZL6_ORYSJ Os08g0154300 protein OS=Oryza sativa subsp. japonica GN=OJ1066_B03.121-1 PE=3 SV=1 Length = 399
Score = 96.7 bits (239), Expect = 9e-19 Identities = 47/61 (77%), Positives = 53/61 (86%) Frame = +1
Query: 325 TELDAISKFSEIVPDTVIFDDFERLAPTAATVSSSLLLGITSVPKTKFNSAIETALAYNE 504 TELDA++ FSEIVPDTV+FDDFE+ APTAATVSSSLLLGI +P TKF SAI+TALA E Sbjct: 64 TELDAVASFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADGE 123
Query: 505 C 507 C Sbjct: 124 C 124
>tr|B7ERR5|B7ERR5_ORYSJ cDNA clone:J033038K01, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 232
Score = 96.7 bits (239), Expect = 9e-19 Identities = 47/61 (77%), Positives = 53/61 (86%) Frame = +1
Query: 325 TELDAISKFSEIVPDTVIFDDFERLAPTAATVSSSLLLGITSVPKTKFNSAIETALAYNE 504 TELDA++ FSEIVPDTV+FDDFE+ APTAATVSSSLLLGI +P TKF SAI+TALA E Sbjct: 64 TELDAVASFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADGE 123
Query: 505 C 507 C Sbjct: 124 C 124
>tr|A2YRB6|A2YRB6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27846 PE=3 SV=1 Length = 399
Score = 96.7 bits (239), Expect = 9e-19 Identities = 47/61 (77%), Positives = 53/61 (86%) Frame = +1
Query: 325 TELDAISKFSEIVPDTVIFDDFERLAPTAATVSSSLLLGITSVPKTKFNSAIETALAYNE 504 TELDA++ FSEIVPDTV+FDDFE+ APTAATVSSSLLLGI +P TKF SAI+TALA E Sbjct: 64 TELDAVASFSEIVPDTVVFDDFEKFAPTAATVSSSLLLGIAGLPDTKFKSAIDTALADGE 123
Query: 505 C 507 C Sbjct: 124 C 124
>tr|A7QVD8|A7QVD8_VITVI Chromosome chr2 scaffold_187, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007295001 PE=3 SV=1 Length = 265
Score = 92.4 bits (228), Expect = 2e-17 Identities = 47/62 (75%), Positives = 51/62 (82%) Frame = +1
Query: 325 TELDAISKFSEIVPDTVIFDDFERLAPTAATVSSSLLLGITSVPKTKFNSAIETALAYNE 504 TE DA+S SEIVPDTVIFDDFER PTAATVSSSLLLGI S+P T F SA+ETALA + Sbjct: 50 TEFDAVSDLSEIVPDTVIFDDFERFPPTAATVSSSLLLGICSLPDTIFRSAVETALADSV 109
Query: 505 CY 510 CY Sbjct: 110 CY 111
>tr|Q8LGN9|Q8LGN9_ARALY Transaldolase-like protein (Fragment) OS=Arabidopsis lyrata PE=3 SV=1 Length = 375
Score = 85.9 bits (211), Expect(2) = 1e-16 Identities = 41/69 (59%), Positives = 54/69 (78%) Frame = +1
Query: 301 AAVQTADYTELDAISKFSEIVPDTVIFDDFERLAPTAATVSSSLLLGITSVPKTKFNSAI 480 ++++ + EL+A+S FSEIVPDTV+FDDFER PTAATVSSSLLLGI +P T F +A+ Sbjct: 61 SSLEAGENNELNAVSAFSEIVPDTVVFDDFERFPPTAATVSSSLLLGICGLPDTIFRNAV 120
Query: 481 ETALAYNEC 507 + ALA + C Sbjct: 121 DMALADSSC 129
Score = 24.3 bits (51), Expect(2) = 1e-16 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +2
Query: 518 DTIESRLSCFTDKA 559 +T ESRLSCF +KA Sbjct: 133 ETTESRLSCFFNKA 146
>tr|Q941R1|Q941R1_SOLLC Transaldolase ToTAL2 OS=Solanum lycopersicum PE=2 SV=1 Length = 397
Score = 89.0 bits (219), Expect = 2e-16 Identities = 43/70 (61%), Positives = 54/70 (77%) Frame = +1
Query: 301 AAVQTADYTELDAISKFSEIVPDTVIFDDFERLAPTAATVSSSLLLGITSVPKTKFNSAI 480 +++ T TELDA++ SEIVPDTVIFDDFE+ PTA T SSSLLLGI +P TKF SA+ Sbjct: 54 SSLDTGLSTELDAVANHSEIVPDTVIFDDFEKFPPTAGTASSSLLLGICGLPDTKFKSAV 113
Query: 481 ETALAYNECY 510 + AL+ +ECY Sbjct: 114 DRALSDSECY 123
>tr|Q7XAS4|Q7XAS4_GOSHI Transaldolase OS=Gossypium hirsutum PE=2 SV=1 Length = 396
Score = 89.0 bits (219), Expect = 2e-16 Identities = 45/69 (65%), Positives = 55/69 (79%) Frame = +1
Query: 301 AAVQTADYTELDAISKFSEIVPDTVIFDDFERLAPTAATVSSSLLLGITSVPKTKFNSAI 480 +++ T TELDA+S FSEIVPDTVIFDDFE+ PTAATVSSSLLLGI S+P T F +A+ Sbjct: 52 SSLDTGLRTELDAVSTFSEIVPDTVIFDDFEKFPPTAATVSSSLLLGILSLPDTIFRNAV 111
Query: 481 ETALAYNEC 507 + ALA + C Sbjct: 112 DLALADSTC 120
>tr|Q9FWX0|Q9FWX0_ARATH T28K15.4 protein (At1g12230) (Expressed protein) OS=Arabidopsis thaliana GN=At1g12230 PE=2 SV=1 Length = 405
Score = 84.7 bits (208), Expect(2) = 3e-16 Identities = 40/69 (57%), Positives = 54/69 (78%) Frame = +1
Query: 301 AAVQTADYTELDAISKFSEIVPDTVIFDDFERLAPTAATVSSSLLLGITSVPKTKFNSAI 480 ++++ + EL+A+S FSEIVPDTV+FDDFER PTAATVSS+LLLGI +P T F +A+ Sbjct: 61 SSLEAGENNELNAVSAFSEIVPDTVVFDDFERFPPTAATVSSALLLGICGLPDTIFRNAV 120
Query: 481 ETALAYNEC 507 + ALA + C Sbjct: 121 DMALADSSC 129
Score = 24.3 bits (51), Expect(2) = 3e-16 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +2
Query: 518 DTIESRLSCFTDKA 559 +T ESRLSCF +KA Sbjct: 133 ETTESRLSCFFNKA 146
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