DK954228 |
Clone id |
TST39A01NGRL0019_O05 |
Library |
TST39 |
Length |
575 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_O05. 5' end sequence. |
Accession |
DK954228 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1891Contig1 |
Sequence |
CCTTTCGCTTCTCACCTTCCATCTCTGCTTGGGGCTGCTTCAGGCGAAGGCTCCGGATTG CAGCAGGTTCTTTATCAATTGAAAGGCCGTACTCTTCTGTTATGATTGTTCCAACCGGTG TTGGCTCCAGTATTGGTGGCTTCGCTGGTGACGCCCTTCCCGTGGCCCGAGCTATGGCCT CTTTATGTGACAACTTGATTACACACCCAAATGTTCTCAATGCGGCAATGTTGTATTGGC CAATTGCTAATATTCTTTATGTGGAAGGGTATGCCCTTGATCGTTTTGCGGAAGGAACTT GGGGGCTGGCTCCAGTGCATCAGAATAAGATTGGACTAGTTCTAGACTCGGGCATGGAAA GAGATTTGCAACTTCGGCATCTGCAAGTAATTGATGCAGCTCGTGCATCACTCGGCTTAT CGATAGTGGACCATATTGTCACCGATGAGCCGCTAGGGGTTGAAAAATGGATAGATGGGG CAACGGGACAGTCAACGGGCCGTTTGCTTCATCCGGATTCATTGAAGAGAGCTGTGGACT CCATGCTGAATGAAACAGATGTTAATGCAATAGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P08452 |
Definition |
sp|P08452|Y1174_SYNP6 Uncharacterized lipoprotein syc1174_c OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) |
Align length |
155 |
Score (bit) |
185.0 |
E-value |
2.0e-46 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LKW4 |
Definition |
tr|B8LKW4|B8LKW4_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
165 |
Score (bit) |
261.0 |
E-value |
3.0e-68 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954228|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_O05, 5' (575 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LKW4|B8LKW4_PICSI Putative uncharacterized protein OS=Picea... 261 3e-68 tr|B4FUE6|B4FUE6_MAIZE Putative uncharacterized protein OS=Zea m... 241 2e-62 tr|B8AD18|B8AD18_ORYSI Putative uncharacterized protein OS=Oryza... 241 3e-62 tr|A9TWJ2|A9TWJ2_PHYPA Predicted protein OS=Physcomitrella paten... 232 1e-59 tr|A3IR94|A3IR94_9CHRO Putative uncharacterized protein OS=Cyano... 214 4e-54 tr|Q4BX02|Q4BX02_CROWT Putative uncharacterized protein OS=Croco... 213 8e-54 tr|A0YL40|A0YL40_9CYAN Putative uncharacterized protein OS=Lyngb... 211 2e-53 tr|B7K4U5|B7K4U5_SYNP8 Putative uncharacterized protein OS=Synec... 210 5e-53 tr|B4BYI3|B4BYI3_9CHRO Putative uncharacterized protein OS=Cyano... 210 5e-53 tr|B1WZB5|B1WZB5_CYAA5 Putative uncharacterized protein OS=Cyano... 209 7e-53 tr|Q8YYR0|Q8YYR0_ANASP Alr0786 protein OS=Anabaena sp. (strain P... 209 1e-52 tr|B4VQS6|B4VQS6_9CYAN Putative uncharacterized protein OS=Micro... 208 2e-52 tr|A0ZJL8|A0ZJL8_NODSP Putative uncharacterized protein OS=Nodul... 207 3e-52 tr|Q3MFP6|Q3MFP6_ANAVT Putative uncharacterized protein OS=Anaba... 207 4e-52 tr|B3DF89|B3DF89_MICAN Putative uncharacterized protein OS=Micro... 205 2e-51 tr|A7P3J6|A7P3J6_VITVI Chromosome chr1 scaffold_5, whole genome ... 205 2e-51 tr|B7KEQ1|B7KEQ1_9CHRO Putative uncharacterized protein OS=Cyano... 204 2e-51 tr|B5VYZ3|B5VYZ3_SPIMA Putative uncharacterized protein OS=Arthr... 204 2e-51 tr|A8YKF5|A8YKF5_MICAE Similar to tr|Q8YYR0|Q8YYR0 OS=Microcysti... 204 3e-51 tr|Q110I4|Q110I4_TRIEI Putative uncharacterized protein OS=Trich... 202 1e-50 tr|B8HK16|B8HK16_9CHRO Putative uncharacterized protein OS=Cyano... 201 3e-50 tr|B4AY65|B4AY65_9CHRO Putative uncharacterized protein OS=Cyano... 197 3e-49 tr|B2J3U7|B2J3U7_NOSP7 Putative uncharacterized protein OS=Nosto... 197 4e-49 tr|B4WIU1|B4WIU1_9SYNE Putative uncharacterized protein OS=Synec... 196 1e-48 tr|P74202|P74202_SYNY3 Slr1287 protein OS=Synechocystis sp. (str... 195 1e-48 tr|A7P3J4|A7P3J4_VITVI Chromosome chr1 scaffold_5, whole genome ... 194 3e-48 tr|Q8DL27|Q8DL27_THEEB Tlr0672 protein OS=Thermosynechococcus el... 188 2e-46 tr|B1XLT5|B1XLT5_SYNP2 Putative uncharacterized protein OS=Synec... 186 8e-46 tr|Q31RE8|Q31RE8_SYNE7 Putative uncharacterized protein OS=Synec... 185 2e-45 tr|Q2JVE8|Q2JVE8_SYNJA Putative uncharacterized protein OS=Synec... 176 8e-43
>tr|B8LKW4|B8LKW4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 433
Score = 261 bits (666), Expect = 3e-68 Identities = 126/165 (76%), Positives = 147/165 (89%) Frame = +3
Query: 81 ERPYSSVMIVPTGVGSSIGGFAGDALPVARAMASLCDNLITHPNVLNAAMLYWPIANILY 260 +RPY+SVMIVPTGVG++IGGFAGDALPVARAMAS+ D LI+HPNVLNAAMLYWP+ N+LY Sbjct: 52 QRPYTSVMIVPTGVGAAIGGFAGDALPVARAMASVVDCLISHPNVLNAAMLYWPMPNVLY 111
Query: 261 VEGYALDRFAEGTWGLAPVHQNKIGLVLDSGMERDLQLRHLQVIDAARASLGLSIVDHIV 440 VEGYALDRFAEG WGL PVHQNK+GLVLD+G+E DL++RHLQV DAA+ASLGL IV+ + Sbjct: 112 VEGYALDRFAEGLWGLQPVHQNKVGLVLDAGIEEDLRVRHLQVADAAQASLGLPIVECVT 171
Query: 441 TDEPLGVEKWIDGATGQSTGRLLHPDSLKRAVDSMLNETDVNAIA 575 TD PL VEKW+D TGQSTGRL HPDSL RAVD+++N +VNAIA Sbjct: 172 TDVPLQVEKWVDAQTGQSTGRLGHPDSLLRAVDTLVNCANVNAIA 216
>tr|B4FUE6|B4FUE6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 275
Score = 241 bits (615), Expect = 2e-62 Identities = 121/197 (61%), Positives = 154/197 (78%), Gaps = 7/197 (3%) Frame = +3
Query: 6 RFSPSISAWGCFRRRLRIAAGSLSIE-------RPYSSVMIVPTGVGSSIGGFAGDALPV 164 RF+PS + RRR R + S S + RPY+SV+I+PTGVG+++GGFAGDALPV Sbjct: 13 RFTPSQAL--APRRRTRARSFSPSADARAACFKRPYTSVLIIPTGVGAAVGGFAGDALPV 70
Query: 165 ARAMASLCDNLITHPNVLNAAMLYWPIANILYVEGYALDRFAEGTWGLAPVHQNKIGLVL 344 ARA+A + D +I+HPNVLNAAMLYWP+ N LYVEGYALDRFAEG+W L PVHQNK+GLVL Sbjct: 71 ARAVAGVADCVISHPNVLNAAMLYWPMPNTLYVEGYALDRFAEGSWALQPVHQNKVGLVL 130
Query: 345 DSGMERDLQLRHLQVIDAARASLGLSIVDHIVTDEPLGVEKWIDGATGQSTGRLLHPDSL 524 DSG+E DL+LRHLQ+ DA RASLGL +V++IVTD PL ++ W D G+STG + + DSL Sbjct: 131 DSGIEEDLRLRHLQIADATRASLGLPVVEYIVTDAPLEIKTWFDPRCGKSTGSVGNSDSL 190
Query: 525 KRAVDSMLNETDVNAIA 575 RAVD+++ +DVNA+A Sbjct: 191 LRAVDALVKHSDVNAVA 207
>tr|B8AD18|B8AD18_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00224 PE=4 SV=1 Length = 536
Score = 241 bits (614), Expect = 3e-62 Identities = 112/167 (67%), Positives = 143/167 (85%) Frame = +3
Query: 75 SIERPYSSVMIVPTGVGSSIGGFAGDALPVARAMASLCDNLITHPNVLNAAMLYWPIANI 254 S RPY+SV++VPTGVG+++GGFAGDALPVARA+ ++ D +I+HPNVLNAAMLYWP+ N Sbjct: 39 SFRRPYTSVLVVPTGVGAAVGGFAGDALPVARALGAVADCVISHPNVLNAAMLYWPMPNT 98
Query: 255 LYVEGYALDRFAEGTWGLAPVHQNKIGLVLDSGMERDLQLRHLQVIDAARASLGLSIVDH 434 LYVEGYALDRFAEG+W L PVHQNK+GLVLDSG+E +L+LRHLQV DAARASLGL +V++ Sbjct: 99 LYVEGYALDRFAEGSWALQPVHQNKVGLVLDSGIEEELRLRHLQVADAARASLGLPVVEY 158
Query: 435 IVTDEPLGVEKWIDGATGQSTGRLLHPDSLKRAVDSMLNETDVNAIA 575 IVTD PL ++ W D G+STG + + DSL RAV++++N +DVNA+A Sbjct: 159 IVTDTPLEIKTWFDPKCGKSTGSVGNSDSLLRAVEALVNRSDVNAVA 205
>tr|A9TWJ2|A9TWJ2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_172375 PE=4 SV=1 Length = 480
Score = 232 bits (592), Expect = 1e-59 Identities = 112/173 (64%), Positives = 141/173 (81%), Gaps = 1/173 (0%) Frame = +3
Query: 60 AAGSLSI-ERPYSSVMIVPTGVGSSIGGFAGDALPVARAMASLCDNLITHPNVLNAAMLY 236 A GS I ++PY+ VMIVPTG G++IGGFAGD+LPVARAM+S+ D LITHPNVLN AML+ Sbjct: 92 ALGSSGIGQKPYTGVMIVPTGTGATIGGFAGDSLPVARAMSSVVDCLITHPNVLNGAMLH 151
Query: 237 WPIANILYVEGYALDRFAEGTWGLAPVHQNKIGLVLDSGMERDLQLRHLQVIDAARASLG 416 WP+A+ LYVEGYALDRFAEG WGL PVHQN++GL+LD G+E +L RHLQV DA RA+LG Sbjct: 152 WPMASTLYVEGYALDRFAEGYWGLQPVHQNRVGLILDMGIEEELIQRHLQVADATRATLG 211
Query: 417 LSIVDHIVTDEPLGVEKWIDGATGQSTGRLLHPDSLKRAVDSMLNETDVNAIA 575 L ++++ +TD PL VEKW+D TG STGRL PDSL RAV++++ V+A+A Sbjct: 212 LPVLEYTITDAPLQVEKWLDPRTGTSTGRLGRPDSLLRAVETLMKGASVDAVA 264
>tr|A3IR94|A3IR94_9CHRO Putative uncharacterized protein OS=Cyanothece sp. CCY 0110 GN=CY0110_27770 PE=4 SV=1 Length = 350
Score = 214 bits (544), Expect = 4e-54 Identities = 101/166 (60%), Positives = 128/166 (77%) Frame = +3
Query: 78 IERPYSSVMIVPTGVGSSIGGFAGDALPVARAMASLCDNLITHPNVLNAAMLYWPIANIL 257 I RPY+ V+IVPTG+G++IGG+AGDALPVA+AMA +CD LITHPNVLN A LYWP+ N L Sbjct: 2 IHRPYTVVLIVPTGIGAAIGGYAGDALPVAKAMAKVCDRLITHPNVLNGAQLYWPLDNTL 61
Query: 258 YVEGYALDRFAEGTWGLAPVHQNKIGLVLDSGMERDLQLRHLQVIDAARASLGLSIVDHI 437 YVEGY LDRFAEG WGL PVHQN++GL+LD G+E +L+ RH+Q DA RA+LGL++ D++ Sbjct: 62 YVEGYGLDRFAEGNWGLNPVHQNRVGLILDRGIEPELRTRHIQAADATRATLGLTLTDYV 121
Query: 438 VTDEPLGVEKWIDGATGQSTGRLLHPDSLKRAVDSMLNETDVNAIA 575 VTD PL VE +G S G + HPDSL RA ++ ++ AIA Sbjct: 122 VTDIPLEVE-LRTANSGASWGTISHPDSLLRAAQKLITKSKAEAIA 166
>tr|Q4BX02|Q4BX02_CROWT Putative uncharacterized protein OS=Crocosphaera watsonii GN=CwatDRAFT_1101 PE=3 SV=1 Length = 350
Score = 213 bits (541), Expect = 8e-54 Identities = 99/166 (59%), Positives = 130/166 (78%) Frame = +3
Query: 78 IERPYSSVMIVPTGVGSSIGGFAGDALPVARAMASLCDNLITHPNVLNAAMLYWPIANIL 257 I RPY++V+IVPTG+G++IGG+AGDALPVA+AMA +C LITHPNVLN A LYWP+ NI Sbjct: 2 INRPYTAVLIVPTGIGAAIGGYAGDALPVAKAMAKVCHRLITHPNVLNGAQLYWPLDNIF 61
Query: 258 YVEGYALDRFAEGTWGLAPVHQNKIGLVLDSGMERDLQLRHLQVIDAARASLGLSIVDHI 437 YVEGY LDRFA+G WGL PVHQN++GL+LD G+E +L+ RH+Q DA RA+LGL++ D++ Sbjct: 62 YVEGYGLDRFAQGRWGLKPVHQNRVGLILDRGIEPELRTRHIQAADATRATLGLTLTDYV 121
Query: 438 VTDEPLGVEKWIDGATGQSTGRLLHPDSLKRAVDSMLNETDVNAIA 575 VTD PL VE +G S G + HP+SL RA D +++++ AIA Sbjct: 122 VTDTPLEVE-LRTADSGASWGTIGHPESLLRAADKLISKSKAEAIA 166
>tr|A0YL40|A0YL40_9CYAN Putative uncharacterized protein OS=Lyngbya sp. PCC 8106 GN=L8106_09836 PE=4 SV=1 Length = 361
Score = 211 bits (537), Expect = 2e-53 Identities = 100/164 (60%), Positives = 131/164 (79%) Frame = +3
Query: 84 RPYSSVMIVPTGVGSSIGGFAGDALPVARAMASLCDNLITHPNVLNAAMLYWPIANILYV 263 RPY+ V+IVPTGVG++IGG+AGDALPVARAM+ +CD LITHPNVLN A LYWP++N+ YV Sbjct: 3 RPYTVVLIVPTGVGAAIGGYAGDALPVARAMSQVCDRLITHPNVLNGAQLYWPLSNVFYV 62
Query: 264 EGYALDRFAEGTWGLAPVHQNKIGLVLDSGMERDLQLRHLQVIDAARASLGLSIVDHIVT 443 EGYALD+FA+G+WGL PVHQN++GL+LD +E +L+ RHLQV DAARA+LGLS+ D++VT Sbjct: 63 EGYALDQFAKGSWGLQPVHQNRVGLLLDQAIEPELRQRHLQVADAARATLGLSLTDYVVT 122
Query: 444 DEPLGVEKWIDGATGQSTGRLLHPDSLKRAVDSMLNETDVNAIA 575 D P+ VE A+G S G + +P SL R + ++ + NAIA Sbjct: 123 DAPIEVELRTT-ASGASWGTIGNPGSLLRGAEVLIKKAKANAIA 165
>tr|B7K4U5|B7K4U5_SYNP8 Putative uncharacterized protein OS=Synechococcus sp. (strain PCC 8801 / RF-1) GN=PCC8801_2596 PE=4 SV=1 Length = 363
Score = 210 bits (534), Expect = 5e-53 Identities = 98/167 (58%), Positives = 130/167 (77%) Frame = +3
Query: 75 SIERPYSSVMIVPTGVGSSIGGFAGDALPVARAMASLCDNLITHPNVLNAAMLYWPIANI 254 S+ RPY+ V+IVPTG+G++IGG+AGDALPVARAM+ +CD LITHPNVLN A LYW + N+ Sbjct: 3 SLNRPYTVVLIVPTGIGAAIGGYAGDALPVARAMSQVCDRLITHPNVLNGAQLYWNLPNV 62
Query: 255 LYVEGYALDRFAEGTWGLAPVHQNKIGLVLDSGMERDLQLRHLQVIDAARASLGLSIVDH 434 LYVEGY LDRFA+G WGL HQN++GL+LD G+E +L+LRHLQ DA RA+LGL + D+ Sbjct: 63 LYVEGYGLDRFAQGDWGLKSTHQNRVGLILDQGIEPELRLRHLQAADATRATLGLDLTDY 122
Query: 435 IVTDEPLGVEKWIDGATGQSTGRLLHPDSLKRAVDSMLNETDVNAIA 575 I+TD PL VE ++G S G + +PDSL RA ++++ + +AIA Sbjct: 123 ILTDAPLNVE-LRTASSGASWGTIGNPDSLVRAAETLITQAKADAIA 168
>tr|B4BYI3|B4BYI3_9CHRO Putative uncharacterized protein OS=Cyanothece sp. PCC 8802 GN=Cyan8802DRAFT_1743 PE=4 SV=1 Length = 363
Score = 210 bits (534), Expect = 5e-53 Identities = 98/167 (58%), Positives = 130/167 (77%) Frame = +3
Query: 75 SIERPYSSVMIVPTGVGSSIGGFAGDALPVARAMASLCDNLITHPNVLNAAMLYWPIANI 254 S+ RPY+ V+IVPTG+G++IGG+AGDALPVARAM+ +CD LITHPNVLN A LYW + N+ Sbjct: 3 SLNRPYTVVLIVPTGIGAAIGGYAGDALPVARAMSQVCDRLITHPNVLNGAQLYWNLPNV 62
Query: 255 LYVEGYALDRFAEGTWGLAPVHQNKIGLVLDSGMERDLQLRHLQVIDAARASLGLSIVDH 434 LYVEGY LDRFA+G WGL HQN++GL+LD G+E +L+LRHLQ DA RA+LGL + D+ Sbjct: 63 LYVEGYGLDRFAQGDWGLKSTHQNRVGLILDQGIEPELRLRHLQAADATRATLGLDLTDY 122
Query: 435 IVTDEPLGVEKWIDGATGQSTGRLLHPDSLKRAVDSMLNETDVNAIA 575 I+TD PL VE ++G S G + +PDSL RA ++++ + +AIA Sbjct: 123 ILTDAPLNVE-LRTASSGASWGTIGNPDSLVRAAETLITQAKADAIA 168
>tr|B1WZB5|B1WZB5_CYAA5 Putative uncharacterized protein OS=Cyanothece (strain ATCC 51142) GN=cce_0129 PE=4 SV=1 Length = 350
Score = 209 bits (533), Expect = 7e-53 Identities = 98/164 (59%), Positives = 126/164 (76%) Frame = +3
Query: 84 RPYSSVMIVPTGVGSSIGGFAGDALPVARAMASLCDNLITHPNVLNAAMLYWPIANILYV 263 RPY++V+IVPTG+G++IGG+AGDALPVA+AMA +CD LITHPNVLN A LYWP+ N YV Sbjct: 4 RPYTAVLIVPTGIGAAIGGYAGDALPVAKAMAQVCDRLITHPNVLNGAQLYWPLDNTFYV 63
Query: 264 EGYALDRFAEGTWGLAPVHQNKIGLVLDSGMERDLQLRHLQVIDAARASLGLSIVDHIVT 443 EGY LDRFA+G WGL PVHQN++GL+LD G+E +L+ RH+Q DA RA+LGL++ D++VT Sbjct: 64 EGYGLDRFAQGDWGLNPVHQNRVGLILDRGIEPELRTRHIQAADATRATLGLTLTDYVVT 123
Query: 444 DEPLGVEKWIDGATGQSTGRLLHPDSLKRAVDSMLNETDVNAIA 575 D PL VE +G S G + HPDSL RA ++ + AIA Sbjct: 124 DTPLQVE-LRTADSGASWGTIGHPDSLLRAAHKLITHSKAEAIA 166
|