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NBDC - LSDB Archive
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DK954233
Clone id TST39A01NGRL0019_O11
Library
Length 501
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_O11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CACGCACTGTGAGATCTCGCTTTCTAGCGGAGTTCGTCGTCCTGCGACATGGCTGCCCTC
GCTGCCGCGTCCGTCTCCAACGCTGCTGCTCTGGGCAACAGCCTTGCCACCAAGAATGCT
CTTCGCGAGAAGGTCCCTGTGGTGCAGGCCAGAGTCAGCATGAATTCTGAGTACTGGTAT
GGGCCCGATCGCCCCAAATACCTTGGCCCCTTCTCTGCCCAGACCCCTTCCTACCTCAAG
GGCGAGTTCCCTGGCGATTACGGCTGGGACACCGCTGGCCTATCTGCAGACCCTGAGGCA
TTTGCTAAGAACAGGGCCTTGGAGGTTATTCACAGCCGATGGGCCATGCTTGGAGCTTTG
GGATGCATCTTCCCAGAGGTTGCACAGAAGTATCTGAATGTGTCCTTCAAGGAGGCAGTC
TGGTTCAAGGCTGGAGCACAGATTTTCTCAGAGGGTGGGTTGGACTACCTCGGCAACCCC
CAACCTTGTTCATGCACAGAG
■■Homology search results ■■ -
sp_hit_id P27489
Definition sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum
Align length 126
Score (bit) 213.0
E-value 5.0e-55
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954233|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_O11, 5'
         (501 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chlorop...   213   5e-55
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...   209   6e-54
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   191   2e-48
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   191   2e-48
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   189   5e-48
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   188   1e-47
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   187   2e-47
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   187   3e-47
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   185   9e-47
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   185   9e-47
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   185   9e-47
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   185   1e-46
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   185   1e-46
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   184   2e-46
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...   184   3e-46
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   184   3e-46
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   183   4e-46
sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloropl...   183   4e-46
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   183   4e-46
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   182   6e-46
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   182   6e-46
sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty...   182   6e-46
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   182   8e-46
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   182   8e-46
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   182   8e-46
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   182   1e-45
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   182   1e-45
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   182   1e-45
sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragmen...   182   1e-45
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   181   1e-45

>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13,
           chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1
          Length = 265

 Score =  213 bits (541), Expect = 5e-55
 Identities = 100/126 (79%), Positives = 111/126 (88%), Gaps = 2/126 (1%)
 Frame = +1

Query: 109 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 282
           TKNA  LR+ V +  AR +M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 23  TKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGL 82

Query: 283 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 462
           SADPEAFAKNRALEVIH RWAMLGALGCIFPEV +K++ V FKE VWFKAG+QIFS+GGL
Sbjct: 83  SADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGL 142

Query: 463 DYLGNP 480
           DYLGNP
Sbjct: 143 DYLGNP 148



 Score = 30.8 bits (68), Expect = 3.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
           +PG   +D  GL+ DP  FA+ +  E+ + R AM    G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226


>sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII type
           III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1
          Length = 268

 Score =  209 bits (532), Expect = 6e-54
 Identities = 94/120 (78%), Positives = 104/120 (86%)
 Frame = +1

Query: 121 LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEA 300
           LR+       R++M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEA
Sbjct: 32  LRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA 91

Query: 301 FAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 480
           FA+NRALEVIH RWAMLGALGC+FPEV QK++ V FKE VWFKAG+QIFSEGGLDYLGNP
Sbjct: 92  FARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNP 151


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  191 bits (485), Expect = 2e-48
 Identities = 88/102 (86%), Positives = 91/102 (89%)
 Frame = +1

Query: 175 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 354
           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 355 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 480
           ALGC+FPE+  K   V F EAVWFKAGAQIFSEGGLDYLGNP
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNP 147


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  191 bits (485), Expect = 2e-48
 Identities = 88/102 (86%), Positives = 91/102 (89%)
 Frame = +1

Query: 175 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 354
           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIHSRWAMLG
Sbjct: 47  WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLG 106

Query: 355 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 480
           ALGC+FPE+  K   V F EAVWFKAGAQIFSEGGLDYLGNP
Sbjct: 107 ALGCVFPEILSKN-GVKFGEAVWFKAGAQIFSEGGLDYLGNP 147


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  189 bits (481), Expect = 5e-48
 Identities = 95/130 (73%), Positives = 99/130 (76%), Gaps = 7/130 (5%)
 Frame = +1

Query: 112 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 270
           ++ L  KV V   R SM           WYG DRPK+LGPFS QTPSYL GEFPGDYGWD
Sbjct: 20  RDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 271 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 450
           TAGLSADPE FAKNR LEVIHSRWAMLGALGCIFPE+  K   V F EAVWFKAGAQIFS
Sbjct: 80  TAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKN-GVQFGEAVWFKAGAQIFS 138

Query: 451 EGGLDYLGNP 480
           EGGLDYLGNP
Sbjct: 139 EGGLDYLGNP 148



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 188 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 225


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  188 bits (478), Expect = 1e-47
 Identities = 94/130 (72%), Positives = 98/130 (75%), Gaps = 7/130 (5%)
 Frame = +1

Query: 112 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 270
           +N L  KV     RVSM           WYGPDRPKYLGPFS QTPSYL GEFPGDYGWD
Sbjct: 20  QNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 79

Query: 271 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 450
           TAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+  K   V F EAVWFKAG+QIF 
Sbjct: 80  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GVKFGEAVWFKAGSQIFQ 138

Query: 451 EGGLDYLGNP 480
           EGGLDYLGNP
Sbjct: 139 EGGLDYLGNP 148


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  187 bits (475), Expect = 2e-47
 Identities = 91/130 (70%), Positives = 99/130 (76%), Gaps = 7/130 (5%)
 Frame = +1

Query: 112 KNALREKVPVVQARVSMN-------SEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWD 270
           +N L +KV   QAR++M           WYGPDRPKYLGPFS  TPSYL GEFPGDYGWD
Sbjct: 22  QNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWD 81

Query: 271 TAGLSADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFS 450
           TA +SADPE FAKNR LEVIH RWAMLGALGC+FPE+  K   + F EAVWFKAGAQIFS
Sbjct: 82  TAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKN-GLKFGEAVWFKAGAQIFS 140

Query: 451 EGGLDYLGNP 480
           EGGLDY GNP
Sbjct: 141 EGGLDYAGNP 150


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  187 bits (474), Expect = 3e-47
 Identities = 87/108 (80%), Positives = 91/108 (84%)
 Frame = +1

Query: 157 SMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHS 336
           S  +  WYGPDRPKYLGPFS Q PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH 
Sbjct: 43  SAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 102

Query: 337 RWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 480
           RWAMLGALGC+FPE+  K   V F EAVWFKAG+QIFSEGGLDYLGNP
Sbjct: 103 RWAMLGALGCVFPEILSKN-GVKFGEAVWFKAGSQIFSEGGLDYLGNP 149



 Score = 30.4 bits (67), Expect = 4.9
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
           +PG   +D  GL+ DP+AFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-AFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFG 226


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score =  185 bits (470), Expect = 9e-47
 Identities = 85/102 (83%), Positives = 90/102 (88%)
 Frame = +1

Query: 175 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 354
           WYG DRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 49  WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLG 108

Query: 355 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 480
           ALGC+FPE+  K   V+F EAVWFKAG+QIFSEGGLDYLGNP
Sbjct: 109 ALGCVFPEILSKN-GVTFGEAVWFKAGSQIFSEGGLDYLGNP 149



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 189 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 226


>sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5,
           chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5
           PE=2 SV=1
          Length = 237

 Score =  185 bits (470), Expect = 9e-47
 Identities = 85/102 (83%), Positives = 90/102 (88%)
 Frame = +1

Query: 175 WYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLG 354
           WYG DRPKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 21  WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLG 80

Query: 355 ALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLGNP 480
           ALGC+FPE+  K   V+F EAVWFKAG+QIFSEGGLDYLGNP
Sbjct: 81  ALGCVFPEILSKN-GVTFGEAVWFKAGSQIFSEGGLDYLGNP 121



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 247 FPGDYGWDTAGLSADPEAFAKNRALEVIHSRWAMLGALG 363
           +PG   +D  GL+ DPEAFA+ +  E+ + R AM    G
Sbjct: 161 YPGG-AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFG 198
tr_hit_id Q9XQB1
Definition tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding protein OS=Phaseolus aureus
Align length 122
Score (bit) 214.0
E-value 2.0e-54
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954233|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_O11, 5'
         (501 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding pr...   214   2e-54
tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome...   211   2e-53
tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, who...   210   3e-53
tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis...   210   3e-53
tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding prote...   209   5e-53
tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding prote...   209   8e-53
tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b b...   209   8e-53
tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplas...   207   2e-52
tr|Q5I8X1|Q5I8X1_PEA Light-harvesting chlorophyll-a/b binding pr...   207   3e-52
tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding ...   207   3e-52
tr|A2YMN1|A2YMN1_ORYSI Putative uncharacterized protein OS=Oryza...   207   3e-52
tr|Q6ZF30|Q6ZF30_ORYSJ Os07g0562700 protein OS=Oryza sativa subs...   206   7e-52
tr|Q9SDT2|Q9SDT2_DAUCA Chlorophyll a/b-binding protein OS=Daucus...   204   1e-51
tr|Q9S7M0|Q9S7M0_ARATH Type III chlorophyll a/b binding protein ...   204   2e-51
tr|B7SAW4|B7SAW4_BAMOL Chloroplast chlorophyll a/b binding prote...   204   2e-51
tr|B6SUM9|B6SUM9_MAIZE Chlorophyll a-b binding protein of LHCII ...   203   3e-51
tr|A9PJV4|A9PJV4_POPJC Putative uncharacterized protein OS=Popul...   202   7e-51
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   198   1e-49
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   198   1e-49
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   198   1e-49
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   197   2e-49
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   197   2e-49
tr|A9TKU6|A9TKU6_PHYPA Predicted protein OS=Physcomitrella paten...   197   3e-49
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   196   5e-49
tr|A9NT55|A9NT55_PICSI Putative uncharacterized protein OS=Picea...   196   5e-49
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   196   5e-49
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   196   7e-49
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea...   194   2e-48
tr|Q39341|Q39341_BRANA LHCII Type III chlorophyll a/b binding pr...   194   2e-48
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   194   2e-48

>tr|Q9XQB1|Q9XQB1_PHAAU LHCII type III chlorophyll a/b binding
           protein OS=Phaseolus aureus GN=CipLhcb3 PE=2 SV=1
          Length = 269

 Score =  214 bits (544), Expect = 2e-54
 Identities = 100/122 (81%), Positives = 107/122 (87%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LR+ V +   + SM++E WYGPDR KYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31  NPLRDVVSMGSGKYSMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFAKNRALEVIH RWAMLGALGCI PEV +K+L V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 475 NP 480
           NP
Sbjct: 151 NP 152


>tr|A7P1F1|A7P1F1_VITVI Chromosome chr19 scaffold_4, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00027591001
           PE=4 SV=1
          Length = 264

 Score =  211 bits (537), Expect = 2e-53
 Identities = 97/122 (79%), Positives = 106/122 (86%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LR+ VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26  NPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFA+NRALEVIH RWAMLGALGCI PEV +K+L V FKE +WFKAGAQIFSEGGLDYLG
Sbjct: 86  EAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWFKAGAQIFSEGGLDYLG 145

Query: 475 NP 480
           NP
Sbjct: 146 NP 147


>tr|A7QYH5|A7QYH5_VITVI Chromosome undetermined scaffold_247, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00009737001 PE=4 SV=1
          Length = 264

 Score =  210 bits (534), Expect = 3e-53
 Identities = 97/122 (79%), Positives = 105/122 (86%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LRE VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 26  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 85

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 86  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 145

Query: 475 NP 480
           NP
Sbjct: 146 NP 147


>tr|A5BW14|A5BW14_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_001096 PE=4 SV=1
          Length = 269

 Score =  210 bits (534), Expect = 3e-53
 Identities = 97/122 (79%), Positives = 105/122 (86%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LRE VP+   + +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 31  NQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 90

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFA+NRALEVIH RWAMLGA GCI PEV +K++ V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 475 NP 480
           NP
Sbjct: 151 NP 152


>tr|B7SAW3|B7SAW3_BAMOL Chloroplast chlorophyll a/b binding protein
           cab-BO3 OS=Bambusa oldhamii PE=2 SV=1
          Length = 267

 Score =  209 bits (533), Expect = 5e-53
 Identities = 99/126 (78%), Positives = 107/126 (84%), Gaps = 2/126 (1%)
 Frame = +1

Query: 109 TKNA--LREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGL 282
           T NA  LR+       R++M+++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGL
Sbjct: 25  TANASPLRDVAAAANGRITMSNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGL 84

Query: 283 SADPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGL 462
           SADPEAFA+NRALEVIH RWAMLGALGCI PEV QK+L V FKE VWFKAGAQIFSEGGL
Sbjct: 85  SADPEAFARNRALEVIHGRWAMLGALGCITPEVLQKWLRVDFKEPVWFKAGAQIFSEGGL 144

Query: 463 DYLGNP 480
           DYLGNP
Sbjct: 145 DYLGNP 150


>tr|B1P0S0|B1P0S0_MEDFA Chloroplast chlorophyll-a/b binding protein
           OS=Medicago falcata GN=CAB PE=2 SV=1
          Length = 266

 Score =  209 bits (531), Expect = 8e-53
 Identities = 97/122 (79%), Positives = 106/122 (86%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LR+ V +  +R +M +E WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 28  NPLRDVVAMGTSRFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 87

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFAKNRALEVIH RWAMLGALGCI PEV +K++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 88  EAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 147

Query: 475 NP 480
           NP
Sbjct: 148 NP 149


>tr|A6H5B7|A6H5B7_VIGUN Putative LHCII type III chlorophyll a/b
           binding protein (Fragment) OS=Vigna unguiculata
           GN=CipLhcb3 PE=2 SV=1
          Length = 211

 Score =  209 bits (531), Expect = 8e-53
 Identities = 97/122 (79%), Positives = 106/122 (86%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LR+ V +   + +M+++ WYGPDR KYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP
Sbjct: 31  NPLRDAVSMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 90

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFAKNRALEVIH RWA+LGALGCI PEV  K+L V FKE VWFKAGAQIFSEGGLDYLG
Sbjct: 91  EAFAKNRALEVIHGRWALLGALGCITPEVLGKWLRVDFKEPVWFKAGAQIFSEGGLDYLG 150

Query: 475 NP 480
           NP
Sbjct: 151 NP 152


>tr|Q04918|Q04918_PEA Chlorophyll a/b-binding protein (Chloroplast
           chlorophyll-a/b binding protein) OS=Pisum sativum
           GN=Lhcb3*1 PE=2 SV=1
          Length = 265

 Score =  207 bits (528), Expect = 2e-52
 Identities = 96/122 (78%), Positives = 106/122 (86%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LR+ V +  ++ +M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 27  NPLRDVVAMGTSKFTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 86

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFAKNRALEVIH RWAMLGALGCI PEV QK++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 87  EAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 146

Query: 475 NP 480
           NP
Sbjct: 147 NP 148


>tr|Q5I8X1|Q5I8X1_PEA Light-harvesting chlorophyll-a/b binding
           protein Lhcb3 OS=Pisum sativum PE=2 SV=1
          Length = 265

 Score =  207 bits (526), Expect = 3e-52
 Identities = 96/122 (78%), Positives = 105/122 (86%)
 Frame = +1

Query: 115 NALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADP 294
           N LR+ V +   + +M ++ WYGPDR KYLGPFSAQTPSYL GEFPGDYGWDTAGLSADP
Sbjct: 27  NPLRDVVAMGTPKFTMGNDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADP 86

Query: 295 EAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDYLG 474
           EAFAKNRALEVIH RWAMLGALGCI PEV QK++ V FKE VWFKAG+QIFSEGGLDYLG
Sbjct: 87  EAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDYLG 146

Query: 475 NP 480
           NP
Sbjct: 147 NP 148


>tr|Q39339|Q39339_BRANA LHC II Type III chlorophyll a /b binding
           protein (Fragment) OS=Brassica napus GN=Lhcb3*1 PE=4
           SV=1
          Length = 202

 Score =  207 bits (526), Expect = 3e-52
 Identities = 96/124 (77%), Positives = 105/124 (84%)
 Frame = +1

Query: 109 TKNALREKVPVVQARVSMNSEYWYGPDRPKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSA 288
           T N LR+ V +   + +M ++ WYGPDR KYLGPFS QTPSYL GEFPGDYGWDTAGLSA
Sbjct: 25  TFNPLRDAVSLGSPKYTMGNDLWYGPDRVKYLGPFSVQTPSYLTGEFPGDYGWDTAGLSA 84

Query: 289 DPEAFAKNRALEVIHSRWAMLGALGCIFPEVAQKYLNVSFKEAVWFKAGAQIFSEGGLDY 468
           DPEAFAKNRALEVIH RWAMLGALGCI PEV QK++ V FKE VWFKAG+QIFSEGGLDY
Sbjct: 85  DPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWVRVDFKEPVWFKAGSQIFSEGGLDY 144

Query: 469 LGNP 480
           LGNP
Sbjct: 145 LGNP 148