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NBDC - LSDB Archive
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DK954244
Clone id TST39A01NGRL0019_O22
Library
Length 570
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_O22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCCTTCGCAAGTAGGTTTAGGGTTTCTGCAGTAGAGCAGCTATGGTGTCCGCCTGCTTCT
CTTCAGTTAATGGTTCGCTTGCAGCAGCAGCTGCCTCCACCACTAGGCCAGAGGGGCGTT
TAACCCTGTTGCAGGCTCCCCGCTCCTTGCGGACCTTGCGACCGTTCGAGCTTCGCATGC
TCTCGCTGTCTGTCCCTCGCAAAGGTCTACACAGACATGGATATGGTGTGGTTGGGCAAG
CTCATGCAGAGCTTTCTGTGGAAGAAGTTCAAGCCCTCGATGCCTCCTCAGACGAAGATG
AGCGCGAAGAAGGTGACTCTCTTGATAACGGACCTTCTTTTCGGGACAACGGCCCGCCCT
TTGGTGAGTCTGTGGCCAAGCTGTATGTTGGGAACCTGCCATGGAGCTGCAACAGCGAAG
AACTTGCTGGCGTTTTTCAGAAAGTGGGCAGCGTAGACATGGTTGAGGTTATTTATGACA
AAGAGTCTGGCAGGAGTCGTGGTTTTGGGTTTGTCACTATGAGCTCTGTAGAGGACTGTA
ATACTGCCATTGAGAAGCTAGACGGGGCTG
■■Homology search results ■■ -
sp_hit_id Q08937
Definition sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris
Align length 71
Score (bit) 83.6
E-value 6.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954244|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_O22, 5'
         (570 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O...    84   6e-16
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=...    84   6e-16
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor...    84   6e-16
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=...    83   8e-16
sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic OS=S...    80   7e-15
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O...    80   7e-15
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=...    78   3e-14
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=...    78   4e-14
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=...    76   1e-13
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...    74   4e-13
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=...    74   7e-13
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=...    72   1e-12
sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabae...    62   2e-09
sp|Q9WX37|RBPE_ANASP Putative RNA-binding protein rbpE OS=Anabae...    62   3e-09
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh...    60   6e-09
sp|Q5RC80|RBM39_PONAB RNA-binding protein 39 OS=Pongo abelii GN=...    60   8e-09
sp|Q8VH51|RBM39_MOUSE RNA-binding protein 39 OS=Mus musculus GN=...    60   8e-09
sp|Q14498|RBM39_HUMAN RNA-binding protein 39 OS=Homo sapiens GN=...    60   8e-09
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi...    60   8e-09
sp|Q57014|RBPA_SYNY3 Putative RNA-binding protein rbpA OS=Synech...    60   1e-08
sp|Q5RF83|CIRBP_PONAB Cold-inducible RNA-binding protein OS=Pong...    60   1e-08
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein OS=Homo...    60   1e-08
sp|Q86U06|RBM23_HUMAN Probable RNA-binding protein 23 OS=Homo sa...    59   1e-08
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein OS=Rattus...    59   1e-08
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein OS=Mus ...    59   1e-08
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein OS=Cric...    59   1e-08
sp|Q9WX39|RBPF_ANASP Putative RNA-binding protein rbpF OS=Anabae...    59   2e-08
sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabae...    59   2e-08
sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit...    59   2e-08
sp|Q9H0L4|CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit...    59   2e-08

>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 291

 Score = 83.6 bits (205), Expect = 6e-16
 Identities = 41/71 (57%), Positives = 56/71 (78%)
 Frame = +3

Query: 354 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 533
           P F E + KL+VGNLP+S +S  LAG+F++ G+V+MVEVIYDK +GRSRGFGFVTMS+ E
Sbjct: 81  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139

Query: 534 DCNTAIEKLDG 566
           +   A ++ +G
Sbjct: 140 EVEAAEQQFNG 150



 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 8/83 (9%)
 Frame = +3

Query: 342 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 497
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 188 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 247

Query: 498 RGFGFVTMSSVEDCNTAIEKLDG 566
           RGFGFVT SS ++ N AI+ L+G
Sbjct: 248 RGFGFVTYSSSKEVNDAIDSLNG 270


>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic
           OS=Spinacia oleracea PE=1 SV=1
          Length = 233

 Score = 83.6 bits (205), Expect = 6e-16
 Identities = 41/76 (53%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
 Frame = +3

Query: 345 DNGPPFGE--SVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVT 518
           + G  F E    AKL+VGNLP+  +SE+LAG+F   G V++ EVIY++E+ RSRGFGFVT
Sbjct: 43  EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVT 102

Query: 519 MSSVEDCNTAIEKLDG 566
           MS+VE+   A+E L+G
Sbjct: 103 MSTVEEAEKAVELLNG 118



 Score = 71.6 bits (174), Expect = 3e-12
 Identities = 34/67 (50%), Positives = 44/67 (65%)
 Frame = +3

Query: 366 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 545
           E   ++YVGNLPW  ++  L  +F + G V    V+ D+E+GRSRGFGFVTMSS  + N 
Sbjct: 146 EPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVND 205

Query: 546 AIEKLDG 566
           AI  LDG
Sbjct: 206 AIAALDG 212


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
           SV=1
          Length = 289

 Score = 83.6 bits (205), Expect = 6e-16
 Identities = 42/79 (53%), Positives = 58/79 (73%), Gaps = 3/79 (3%)
 Frame = +3

Query: 339 FRDNGPPFGESVA---KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFG 509
           F D  PP  +S +   KL+VGNLP++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFG
Sbjct: 76  FADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFG 135

Query: 510 FVTMSSVEDCNTAIEKLDG 566
           FVTMSSV +   A ++ +G
Sbjct: 136 FVTMSSVSEVEAAAQQFNG 154



 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 34/81 (41%), Positives = 47/81 (58%)
 Frame = +3

Query: 327 NGPSFRDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGF 506
           +G  +   G     S  ++YVGNL W  +   L  +F + G V    VIYD++SGRS+GF
Sbjct: 188 SGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGF 247

Query: 507 GFVTMSSVEDCNTAIEKLDGA 569
           GFVT  S ++   AI+ LDGA
Sbjct: 248 GFVTYDSSQEVQNAIKSLDGA 268


>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 292

 Score = 83.2 bits (204), Expect = 8e-16
 Identities = 41/71 (57%), Positives = 56/71 (78%)
 Frame = +3

Query: 354 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 533
           P F E + KL+VGNLP+S +S  LAG+F++ G+V++VEVIYDK SGRSRGFGFVTMS+ E
Sbjct: 82  PRFSEDL-KLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140

Query: 534 DCNTAIEKLDG 566
           +   A ++ +G
Sbjct: 141 EVEAAEQQFNG 151



 Score = 69.7 bits (169), Expect = 1e-11
 Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 8/83 (9%)
 Frame = +3

Query: 342 RDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRS 497
           RD    FG        +S  ++YVGNL W  +   L  +F + G+V   +V+YD++SGRS
Sbjct: 189 RDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRS 248

Query: 498 RGFGFVTMSSVEDCNTAIEKLDG 566
           RGFGFVT SS ++ N AI+ L+G
Sbjct: 249 RGFGFVTYSSAKEVNDAIDSLNG 271


>sp|P82277|RRP2_SPIOL 30S ribosomal protein 2, chloroplastic
           OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1
          Length = 260

 Score = 80.1 bits (196), Expect = 7e-15
 Identities = 36/67 (53%), Positives = 51/67 (76%)
 Frame = +3

Query: 363 GESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCN 542
           GE   +LYVGN+P + N++EL  + ++ G++++ EV+YDK SGRSR FGFVTM +VED N
Sbjct: 80  GEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDAN 139

Query: 543 TAIEKLD 563
             IEKL+
Sbjct: 140 AVIEKLN 146



 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 26/70 (37%), Positives = 39/70 (55%)
 Frame = +3

Query: 360 FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDC 539
           F ES  K+Y+GNL  +  +E L   F + G V   +V     + +S GFGFV+ SS E+ 
Sbjct: 179 FVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEV 238

Query: 540 NTAIEKLDGA 569
             AI+ L+ +
Sbjct: 239 EAAIQALNNS 248


>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 273

 Score = 80.1 bits (196), Expect = 7e-15
 Identities = 37/63 (58%), Positives = 51/63 (80%)
 Frame = +3

Query: 378 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 557
           K++VGNLP+S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 558 LDG 566
            +G
Sbjct: 148 FNG 150



 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 35/67 (52%), Positives = 47/67 (70%)
 Frame = +3

Query: 366 ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNT 545
           +S  ++YVGNL W  + + L  +F + G V   +V+YD++SGRSRGFGFVT SS E+ N 
Sbjct: 185 DSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNN 244

Query: 546 AIEKLDG 566
           AIE LDG
Sbjct: 245 AIESLDG 251


>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1
          Length = 329

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 35/63 (55%), Positives = 52/63 (82%)
 Frame = +3

Query: 375 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 554
           AKL+VGNL +  NS+ LA +F++ G+V++ EVIY++E+ +SRGFGFVTMSSV++  TA+E
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209

Query: 555 KLD 563
           K +
Sbjct: 210 KFN 212



 Score = 77.0 bits (188), Expect = 6e-14
 Identities = 36/74 (48%), Positives = 48/74 (64%)
 Frame = +3

Query: 345 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 524
           +  P   E   ++YVGNLPW  ++  L  +F + G V    V+YD+E+GRSRGFGFVTMS
Sbjct: 234 ERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMS 293

Query: 525 SVEDCNTAIEKLDG 566
            V++ N AI  LDG
Sbjct: 294 DVDELNEAISALDG 307


>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana sylvestris PE=1 SV=1
          Length = 276

 Score = 77.8 bits (190), Expect = 4e-14
 Identities = 36/60 (60%), Positives = 50/60 (83%)
 Frame = +3

Query: 375 AKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIE 554
           AKL+VGNLP+  +SE LA +FQ+ G V++ EVIY++E+ RSRGFGFVTMS+VE+ + A+E
Sbjct: 97  AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156



 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 34/74 (45%), Positives = 46/74 (62%)
 Frame = +3

Query: 345 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 524
           +  P   +   ++YVGN+PW  +   L  VF + G V    V++D+ESGRSRGFGFVTMS
Sbjct: 181 ERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMS 240

Query: 525 SVEDCNTAIEKLDG 566
           S  + + AI  LDG
Sbjct: 241 SEAEMSEAIANLDG 254


>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic
           OS=Nicotiana plumbaginifolia PE=2 SV=1
          Length = 279

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 36/63 (57%), Positives = 50/63 (79%)
 Frame = +3

Query: 378 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 557
           K++VGNL +S +S  LA +F++ G+V+MVEVIYDK +GRSRGFGFVTMSS E+   A ++
Sbjct: 88  KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147

Query: 558 LDG 566
            +G
Sbjct: 148 FNG 150



 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 8/85 (9%)
 Frame = +3

Query: 336 SFRDNGPPFG--------ESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 491
           SFR+N    G        +S  ++YVGNL W  + + L  +F + G V   +V+YD++SG
Sbjct: 173 SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSG 232

Query: 492 RSRGFGFVTMSSVEDCNTAIEKLDG 566
           RSRGFGFVT SS E+ N AIE LDG
Sbjct: 233 RSRGFGFVTYSSAEEVNNAIESLDG 257


>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2
          Length = 342

 Score = 74.3 bits (181), Expect = 4e-13
 Identities = 34/63 (53%), Positives = 49/63 (77%)
 Frame = +3

Query: 378 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 557
           KL+VGNL ++ +S +LA +F+  G+V+MVEVIYDK +GRSRGFGFVTMS+  +   A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159

Query: 558 LDG 566
            +G
Sbjct: 160 FNG 162



 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 32/64 (50%), Positives = 43/64 (67%)
 Frame = +3

Query: 378 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 557
           +LYVGNL W  +   L  +F + G V    VIYD++SGRS+GFGFVT+SS ++   AI  
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 558 LDGA 569
           L+GA
Sbjct: 318 LNGA 321
tr_hit_id A5BDH4
Definition tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 64
Score (bit) 96.7
E-value 8.0e-19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954244|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_O22, 5'
         (570 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis...    97   8e-19
tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment) OS=Physcomit...    96   2e-18
tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome ...    96   2e-18
tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea m...    91   3e-17
tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1       90   1e-16
tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Popul...    90   1e-16
tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1       89   1e-16
tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativ...    89   2e-16
tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseo...    89   2e-16
tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subs...    89   2e-16
tr|A2XHA8|A2XHA8_ORYSI Putative uncharacterized protein OS=Oryza...    89   2e-16
tr|A6N1F5|A6N1F5_ORYSI Chloroplast 29 kDa ribonucleoprotein (Fra...    88   4e-16
tr|Q8LHN4|Q8LHN4_ORYSJ Os07g0631900 protein OS=Oryza sativa subs...    87   5e-16
tr|A2YNZ1|A2YNZ1_ORYSI Putative uncharacterized protein OS=Oryza...    87   5e-16
tr|B7FKI6|B7FKI6_MEDTR Putative uncharacterized protein OS=Medic...    87   6e-16
tr|Q6K6C4|Q6K6C4_ORYSJ Os02g0815200 protein OS=Oryza sativa subs...    86   1e-15
tr|A2XAZ0|A2XAZ0_ORYSI Putative uncharacterized protein OS=Oryza...    86   1e-15
tr|A7PT43|A7PT43_VITVI Chromosome chr8 scaffold_29, whole genome...    86   1e-15
tr|A9SSU3|A9SSU3_PHYPA Predicted protein OS=Physcomitrella paten...    85   2e-15
tr|A9TLQ3|A9TLQ3_PHYPA Predicted protein OS=Physcomitrella paten...    85   3e-15
tr|A9P1T0|A9P1T0_PICSI Putative uncharacterized protein OS=Picea...    85   3e-15
tr|A9NNN9|A9NNN9_PICSI Putative uncharacterized protein OS=Picea...    85   3e-15
tr|O04240|O04240_VICFA RNA- or ssDNA-binding protein (Fragment) ...    84   5e-15
tr|Q8L941|Q8L941_ARATH Putative RNA-binding protein OS=Arabidops...    84   7e-15
tr|Q7GA50|Q7GA50_ARATH Putative RNA-binding protein OS=Arabidops...    84   7e-15
tr|A9TLQ5|A9TLQ5_PHYPA Predicted protein (Fragment) OS=Physcomit...    83   1e-14
tr|B6SS58|B6SS58_MAIZE Ribonucleoprotein OS=Zea mays PE=2 SV=1         82   3e-14
tr|B4FMY7|B4FMY7_MAIZE Putative uncharacterized protein OS=Zea m...    82   3e-14
tr|A9NTU4|A9NTU4_PICSI Putative uncharacterized protein OS=Picea...    82   3e-14
tr|Q41367|Q41367_SPIOL 24 kDa RNA binding protein (Fragment) OS=...    81   4e-14

>tr|A5BDH4|A5BDH4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_026573 PE=4 SV=1
          Length = 355

 Score = 96.7 bits (239), Expect = 8e-19
 Identities = 43/64 (67%), Positives = 53/64 (82%)
 Frame = +3

Query: 378 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 557
           KLY GNLP+SC+S  LAG+ Q  GS ++VEV+YD+++GRSRGF FVTMSSVEDCN  IE 
Sbjct: 67  KLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCNAVIEN 126

Query: 558 LDGA 569
           LDG+
Sbjct: 127 LDGS 130



 Score = 47.0 bits (110), Expect = 7e-04
 Identities = 23/46 (50%), Positives = 30/46 (65%)
 Frame = +3

Query: 354 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESG 491
           P + E+  KL+VGNL WS  SE L  VFQ+ G+V    V+YD E+G
Sbjct: 150 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETG 195


>tr|A9SLJ0|A9SLJ0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_47163 PE=4 SV=1
          Length = 192

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 42/63 (66%), Positives = 53/63 (84%)
 Frame = +3

Query: 378 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 557
           KLY+GNLPW C+S +LAG+ Q+ GSV++VEVIYD+ESGRSRGF FVTM++ ED    IE+
Sbjct: 1   KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60

Query: 558 LDG 566
           LDG
Sbjct: 61  LDG 63



 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 33/64 (51%), Positives = 43/64 (67%)
 Frame = +3

Query: 378 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 557
           K++VGNL W  ++  L  +F   G V    V+YD+ESGRSRGFGFVT S V + + AI+ 
Sbjct: 108 KVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVTYSDVSEVDAAIDS 167

Query: 558 LDGA 569
           LDGA
Sbjct: 168 LDGA 171


>tr|A7NXI6|A7NXI6_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020349001
           PE=4 SV=1
          Length = 283

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = +3

Query: 378 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 557
           KLY GNLP+SC+S +LAG+ Q  GS ++VEV+Y++++GRSRGF FVTMSSVEDCN  IE 
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171

Query: 558 LDGA 569
           LDG+
Sbjct: 172 LDGS 175



 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 36/71 (50%), Positives = 49/71 (69%)
 Frame = +3

Query: 354 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 533
           P + E+  KL+VGNL WS  SE L  VFQ+ G+V    V+YD E+GRSRG+GFV  S+  
Sbjct: 195 PLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVCYSTKA 254

Query: 534 DCNTAIEKLDG 566
           + +TA+E L+G
Sbjct: 255 EMDTALESLNG 265


>tr|B4FLX0|B4FLX0_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 287

 Score = 91.3 bits (225), Expect = 3e-17
 Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
 Frame = +3

Query: 330 GPSFRDNGPPFGESVA--KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 503
           G S  D+GP    S    KLY GNLP++C+S +LAG+ Q+  S +MVEV+YD+ +GRSRG
Sbjct: 99  GASSDDSGPSVAASTTTTKLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRG 158

Query: 504 FGFVTMSSVEDCNTAIEKLDGA 569
           F FVTM++V+DC   I+ LDG+
Sbjct: 159 FAFVTMTTVQDCELVIKNLDGS 180



 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
 Frame = +3

Query: 336 SFRDNGPP----FGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRG 503
           +F D   P    + E+  KL+VGNL W+  SE L   F + G+V    V+YD E+GRSRG
Sbjct: 190 NFADRPKPKQALYPETEHKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRG 249

Query: 504 FGFVTMSSVEDCNTAIEKLDG 566
           +GFV  S+ E+ + A+  L+G
Sbjct: 250 YGFVCYSTREEMDEALSSLNG 270


>tr|B6U471|B6U471_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
          Length = 268

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 42/74 (56%), Positives = 58/74 (78%)
 Frame = +3

Query: 345 DNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMS 524
           D    F E + KL+VGNLP+S +S +LAG+F++ GSV+MVEV+YD+ +GRSRGFGFVTMS
Sbjct: 70  DGSEEFSEDL-KLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMS 128

Query: 525 SVEDCNTAIEKLDG 566
           S E+   A+E+ +G
Sbjct: 129 SAEEAEAAVEQFNG 142



 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 36/72 (50%), Positives = 47/72 (65%)
 Frame = +3

Query: 351 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 530
           G  F +S  K+YVGNL W  ++  L  +F + G V   +VIYD++SGRSRGFGFVT  S 
Sbjct: 176 GGGFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSRGFGFVTYGSA 235

Query: 531 EDCNTAIEKLDG 566
           ++ N AI  LDG
Sbjct: 236 QEVNNAISNLDG 247


>tr|A9PFU9|A9PFU9_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 279

 Score = 89.7 bits (221), Expect = 1e-16
 Identities = 40/64 (62%), Positives = 53/64 (82%)
 Frame = +3

Query: 378 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 557
           KLY GNLP++ +S +LAG+ Q+ G+ +MVEV+Y +E+GRSRGF FVTMSS+EDC T IE 
Sbjct: 108 KLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIEN 167

Query: 558 LDGA 569
           LDG+
Sbjct: 168 LDGS 171



 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 33/71 (46%), Positives = 48/71 (67%)
 Frame = +3

Query: 354 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 533
           P + E+  KL++GNL WS  SE L   FQ+ G+V    V+YD E+G+SRG+GFV  S+ E
Sbjct: 191 PLYPETEYKLFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKE 250

Query: 534 DCNTAIEKLDG 566
           +  TA++ L+G
Sbjct: 251 ELETALQSLNG 261


>tr|B6T531|B6T531_MAIZE Ribonucleoprotein A OS=Zea mays PE=2 SV=1
          Length = 264

 Score = 89.4 bits (220), Expect = 1e-16
 Identities = 42/75 (56%), Positives = 60/75 (80%)
 Frame = +3

Query: 342 RDNGPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTM 521
           R  G  F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTM
Sbjct: 73  RSGGDEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTM 131

Query: 522 SSVEDCNTAIEKLDG 566
           SSVE+   A+++ +G
Sbjct: 132 SSVEEVEVAVDQFNG 146



 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 47/123 (38%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
 Frame = +3

Query: 219 GYGVVGQAHAELSVEEVQALXXXXXXXXXXXXXXXXNG--PSFRDNGPPFGE----SVAK 380
           G+G V  +    SVEEV+                  N   P  RD   P  +       +
Sbjct: 125 GFGFVTMS----SVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSPQRPRGDANR 180

Query: 381 LYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEKL 560
           +YVGNL W  ++  LA +F + G V    +IYD+ESGRSRGFGFVT  S E+   AI  L
Sbjct: 181 VYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNL 240

Query: 561 DGA 569
           DGA
Sbjct: 241 DGA 243


>tr|Q8S7G2|Q8S7G2_ORYSA Putative ribonucleoprotein OS=Oryza sativa
           GN=OSJNBb0048D20.12 PE=4 SV=1
          Length = 265

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 42/72 (58%), Positives = 59/72 (81%)
 Frame = +3

Query: 351 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 530
           G  F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTMSSV
Sbjct: 79  GEEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 137

Query: 531 EDCNTAIEKLDG 566
           E+   A+E+ +G
Sbjct: 138 EEVEAAVEQFNG 149



 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = +3

Query: 357 PFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVED 536
           P GE+  ++YVGNL W  ++  LA +F   G V   +VIYD+ESGRSRGFGFVT  S E+
Sbjct: 175 PRGEA-NRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEE 233

Query: 537 CNTAIEKLDGA 569
              A+  LDGA
Sbjct: 234 VENAVSNLDGA 244


>tr|Q41124|Q41124_PHAVU Chloroplast RNA binding protein OS=Phaseolus
           vulgaris GN=RNP1 PE=2 SV=1
          Length = 287

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 38/63 (60%), Positives = 51/63 (80%)
 Frame = +3

Query: 378 KLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVEDCNTAIEK 557
           KLY GNLP+S +S +LAG+ Q  GS +++EV+YD+++G+SRGF FVTMS +EDCN  IE 
Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIEN 173

Query: 558 LDG 566
           LDG
Sbjct: 174 LDG 176



 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 32/70 (45%), Positives = 45/70 (64%)
 Frame = +3

Query: 354 PPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVE 533
           P + E+  KL+VGNL WS  +E L   FQ+ G+V    V+YD E+GRSRG+GFV  S+ E
Sbjct: 197 PLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKE 256

Query: 534 DCNTAIEKLD 563
           +   A+  L+
Sbjct: 257 EMEAALGALN 266


>tr|Q10KP0|Q10KP0_ORYSJ Os03g0376600 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0376600 PE=2 SV=1
          Length = 265

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 42/72 (58%), Positives = 59/72 (81%)
 Frame = +3

Query: 351 GPPFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSV 530
           G  F + + +++VGNLP+S +S +LAG+F++ GSV+MVEVIYDK +GRSRGFGFVTMSSV
Sbjct: 79  GEEFSDDL-RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 137

Query: 531 EDCNTAIEKLDG 566
           E+   A+E+ +G
Sbjct: 138 EEVEAAVEQFNG 149



 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 37/71 (52%), Positives = 47/71 (66%)
 Frame = +3

Query: 357 PFGESVAKLYVGNLPWSCNSEELAGVFQKVGSVDMVEVIYDKESGRSRGFGFVTMSSVED 536
           P GE+  ++YVGNL W  ++  LA +F   G V   +VIYD+ESGRSRGFGFVT  S E+
Sbjct: 175 PRGEA-NRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEE 233

Query: 537 CNTAIEKLDGA 569
              A+  LDGA
Sbjct: 234 VENAVSNLDGA 244