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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK954248
Clone id TST39A01NGRL0019_P02
Library
Length 639
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_P02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATCTTCTCTTGTGTCCTATAATTTGGCCTTGATTGCACTCAAAATCAGGGATGGAGTGTA
AGGAGAAGAGGCAATGAGCAGCTGCTTTTTTGTGTGTTTTGCTGCCAAAGAGAGGCCTCT
ATTTTAGTGAGGAGCGCATGTGTGTATCTGTGTATGTGTGTTGAAGAAAACATTAGCTGC
AAAGAAGAGAAAGCTGTGAACAAAAGCTTATAATCAGAGAGCATCCCACCCCAAACGCAC
ATGGAAACCTTCCCTACACATCCCTTCAGAATGCCTCCTCTCTCCTTGCTCGCCACTTTC
CTCCTTTTGATCAGCTTGTCTACCATCCAAGCATGGGACTGCGAGAGCTCCTGCGGTGGC
ATCACATTGAACTCCCCTTTCGGCTCTGCTTCCGGCTGCGGCAGCTCCGCTTTCCAACCT
TATGTCAACTGCAGCAATGGAAAGCTCCTCTTCTACTCCCCCACAGGCACCTACCAGGTG
CAATCCATCGATTACAGCAACAATGTGATGGTGGTGATCGATCCACAGATGTCCACTTGC
AGCTCTATGCAGTTGAGCGGTGCGTTCGGGCTGCCGATCGGCGCCCCCTTCTCCTTCTCC
AGCTACAACAAGGTGGTCTTGATAGGGTGCTCATCGACC
■■Homology search results ■■ -
sp_hit_id Q313Q6
Definition sp|Q313Q6|MRAY_DESDG Phospho-N-acetylmuramoyl-pentapeptide-transferase OS=Desulfovibrio desulfuricans (strain G20)
Align length 71
Score (bit) 33.9
E-value 0.73
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954248|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_P02, 5'
         (639 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q313Q6|MRAY_DESDG Phospho-N-acetylmuramoyl-pentapeptide-trans...    34   0.73 
sp|Q9LZM4|WAKLQ_ARATH Putative wall-associated receptor kinase-l...    33   1.3  
sp|A6NI73|LIRA5_HUMAN Leukocyte immunoglobulin-like receptor sub...    30   8.1  
sp|Q9H2J7|S6A15_HUMAN Orphan sodium- and chloride-dependent neur...    30   8.1  
sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus ...    30   8.1  

>sp|Q313Q6|MRAY_DESDG
           Phospho-N-acetylmuramoyl-pentapeptide-transferase
           OS=Desulfovibrio desulfuricans (strain G20) GN=mraY PE=3
           SV=1
          Length = 358

 Score = 33.9 bits (76), Expect = 0.73
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = -2

Query: 302 RKVASKERGGILKGCVGKVSMCVWGGMLSDY----KLLFTAFSSLQLMFSSTHIHRYTHA 135
           +K  +   GG+L G    +S+ +WG + + Y     L+FT F  +  +   T + R T+ 
Sbjct: 66  QKAGTPTMGGLLIGFSLIISVLLWGDLTNVYLWLVMLVFTGFGLVGFLDDYTKLRRKTNQ 125

Query: 134 LLTKIEASLWQ 102
            LT     LWQ
Sbjct: 126 GLTARSKFLWQ 136


>sp|Q9LZM4|WAKLQ_ARATH Putative wall-associated receptor kinase-like
           20 OS=Arabidopsis thaliana GN=WAKL20 PE=3 SV=1
          Length = 657

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
 Frame = +1

Query: 424 VNCSNGKLLFYSPTGT-YQVQSIDYSNNVMVVIDPQMST---CSSMQLSGAFGLPIGA-- 585
           +NC  GKL F +  G+ Y + SI+     +V+  P +++   C S  +S   GL +    
Sbjct: 68  INCVGGKLYFGALHGSSYVITSINSVTQRIVLRPPGLASSVSCISADVSKQ-GLELDPHL 126

Query: 586 PFSFSSYNKVVLIGCS 633
           PFS +S N ++L+ CS
Sbjct: 127 PFSITSSNTILLLNCS 142


>sp|A6NI73|LIRA5_HUMAN Leukocyte immunoglobulin-like receptor
           subfamily A member 5 OS=Homo sapiens GN=LILRA5 PE=1 SV=1
          Length = 299

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +3

Query: 429 LQQWKAPLLLPHRHLPGAIHRLQQQCDGGDRSTDVHLQLYAVERCVR 569
           LQ W  P  L    + GA   L    +  D  T  HLQ YAVE  +R
Sbjct: 222 LQVWSEPSDLLEIPVSGAADNLSPSQNKSDSGTASHLQDYAVENLIR 268


>sp|Q9H2J7|S6A15_HUMAN Orphan sodium- and chloride-dependent
           neurotransmitter transporter NTT73 OS=Homo sapiens
           GN=SLC6A15 PE=1 SV=1
          Length = 730

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 17/77 (22%)
 Frame = +1

Query: 433 SNGKLLFYSPTGTYQVQ------------SID-----YSNNVMVVIDPQMSTCSSMQLSG 561
           S+GK++++S    Y V             SID     ++  + ++++P++   ++ Q+  
Sbjct: 249 SSGKIIYFSSLFPYVVLICFLIRAFLLNGSIDGIRHMFTPKLEIMLEPKVWREAATQVFF 308

Query: 562 AFGLPIGAPFSFSSYNK 612
           A GL  G   +FSSYNK
Sbjct: 309 ALGLGFGGVIAFSSYNK 325


>sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus
           gallus GN=NHLRC2 PE=2 SV=1
          Length = 727

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +1

Query: 490 DYSNNVMVVIDPQMSTCSSMQLSGAFGLPIGAPFSFSSYNK 612
           D  N+ + V+DP+M  C+++  +G     +G+ F+ S++N+
Sbjct: 488 DSYNHKIKVVDPKMKNCATLAGTGEASNVVGSSFTQSTFNE 528
tr_hit_id A7P2F4
Definition tr|A7P2F4|A7P2F4_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera
Align length 100
Score (bit) 84.7
E-value 4.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954248|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_P02, 5'
         (639 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P2F4|A7P2F4_VITVI Chromosome chr1 scaffold_5, whole genome ...    85   4e-15
tr|A7Q2N2|A7Q2N2_VITVI Chromosome chr1 scaffold_46, whole genome...    82   2e-14
tr|B8LQW8|B8LQW8_PICSI Putative uncharacterized protein OS=Picea...    80   8e-14
tr|A5AJ67|A5AJ67_VITVI Putative uncharacterized protein OS=Vitis...    75   3e-12
tr|Q9SY81|Q9SY81_ARATH F14N23.27 OS=Arabidopsis thaliana PE=4 SV=1     60   1e-07
tr|Q93ZB0|Q93ZB0_ARATH At1g10380/F14N23_32 (Putative uncharacter...    60   1e-07
tr|Q9LUT6|Q9LUT6_ARATH Gb|AAD32889.1 OS=Arabidopsis thaliana GN=...    59   2e-07
tr|A9PCR1|A9PCR1_POPTR Putative uncharacterized protein OS=Popul...    58   4e-07
tr|A7NVX4|A7NVX4_VITVI Chromosome chr5 scaffold_2, whole genome ...    56   2e-06
tr|A7R4P0|A7R4P0_VITVI Chromosome undetermined scaffold_748, who...    55   3e-06
tr|A7PCX6|A7PCX6_VITVI Chromosome chr17 scaffold_12, whole genom...    55   3e-06
tr|B6TNI8|B6TNI8_MAIZE Putative uncharacterized protein OS=Zea m...    53   1e-05
tr|A9P966|A9P966_POPTR Putative uncharacterized protein OS=Popul...    52   2e-05
tr|Q9FGR6|Q9FGR6_ARATH Genomic DNA, chromosome 5, TAC clone:K6A1...    52   4e-05
tr|Q5XV04|Q5XV04_ARATH Putative uncharacterized protein OS=Arabi...    52   4e-05
tr|Q5S4S0|Q5S4S0_ARATH Putative uncharacterized protein OS=Arabi...    52   4e-05
tr|Q6I571|Q6I571_ORYSJ Os05g0409100 protein OS=Oryza sativa subs...    51   7e-05
tr|A3B3Z1|A3B3Z1_ORYSJ Putative uncharacterized protein OS=Oryza...    51   7e-05
tr|A2Y4L6|A2Y4L6_ORYSI Putative uncharacterized protein OS=Oryza...    51   7e-05
tr|B8LMZ8|B8LMZ8_PICSI Putative uncharacterized protein OS=Picea...    49   2e-04
tr|A7QUJ5|A7QUJ5_VITVI Chromosome chr10 scaffold_179, whole geno...    49   2e-04
tr|A9P8X3|A9P8X3_POPTR Putative uncharacterized protein OS=Popul...    49   3e-04
tr|Q69KT1|Q69KT1_ORYSJ Os06g0364500 protein OS=Oryza sativa subs...    48   4e-04
tr|B6TY86|B6TY86_MAIZE Putative uncharacterized protein OS=Zea m...    48   6e-04
tr|B7ZYE5|B7ZYE5_MAIZE Putative uncharacterized protein OS=Zea m...    47   0.001
tr|O65389|O65389_ARATH F12F1.23 protein (Putative uncharacterize...    46   0.002
tr|A7PRW4|A7PRW4_VITVI Chromosome chr14 scaffold_27, whole genom...    43   0.019
tr|A9PIH2|A9PIH2_POPTR Putative uncharacterized protein OS=Popul...    41   0.054
tr|A5PDR2|A5PDR2_9SPHN Putative Glutathione-dependent formaldehy...    39   0.20 
tr|Q0FY37|Q0FY37_9RHIZ Putative Glutathione-dependent formaldehy...    36   1.7  

>tr|A7P2F4|A7P2F4_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030036001
           PE=4 SV=1
          Length = 329

 Score = 84.7 bits (208), Expect = 4e-15
 Identities = 43/100 (43%), Positives = 58/100 (58%)
 Frame = +1

Query: 340 CESSCGGITLNXXXXXXXXXXXXXXQPYVNCSNGKLLFYSPTGTYQVQSIDYSNNVMVVI 519
           C   CG IT+                 YV CS+G L F + TG Y V SIDYS++ ++V 
Sbjct: 36  CSDVCGNITVKFPFGTGFGCGHPDFARYVKCSSGTLQFSTLTGIYTVASIDYSSSTIIVN 95

Query: 520 DPQMSTCSSMQLSGAFGLPIGAPFSFSSYNKVVLIGCSST 639
           DP MSTC+SMQ SG+F L   +PF+  + +  VL+GCS+T
Sbjct: 96  DPLMSTCTSMQNSGSFSLDRASPFTIMADDVFVLLGCSTT 135


>tr|A7Q2N2|A7Q2N2_VITVI Chromosome chr1 scaffold_46, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028952001
           PE=4 SV=1
          Length = 372

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 42/100 (42%), Positives = 52/100 (52%)
 Frame = +1

Query: 340 CESSCGGITLNXXXXXXXXXXXXXXQPYVNCSNGKLLFYSPTGTYQVQSIDYSNNVMVVI 519
           C+ +CG   L               QPYV CS  KL F + TG Y + +IDY++ V+ + 
Sbjct: 102 CQRTCGNQHLKYPFGSGPGCGDPRFQPYVTCSQEKLTFITHTGYYTITNIDYNSQVLCIT 161

Query: 520 DPQMSTCSSMQLSGAFGLPIGAPFSFSSYNKVVLIGCSST 639
           DP MSTCS  Q S  FGL   APFSF   N   L+ CS T
Sbjct: 162 DPSMSTCSCAQPSKGFGLDWNAPFSFHDGNVFALLDCSIT 201


>tr|B8LQW8|B8LQW8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 323

 Score = 80.5 bits (197), Expect = 8e-14
 Identities = 39/100 (39%), Positives = 56/100 (56%)
 Frame = +1

Query: 334 WDCESSCGGITLNXXXXXXXXXXXXXXQPYVNCSNGKLLFYSPTGTYQVQSIDYSNNVMV 513
           W C  +CG + +               Q  V+C N KL+F + +G+Y + SIDYS   + 
Sbjct: 52  WACRDTCGNLQVKYPFGTGPGCGDPRFQNSVSCVNQKLMFTTHSGSYPISSIDYSQTTIY 111

Query: 514 VIDPQMSTCSSMQLSGAFGLPIGAPFSFSSYNKVVLIGCS 633
           + DPQMSTC++M  SG+FGL   APF F + +  VL+ CS
Sbjct: 112 LADPQMSTCAAMTSSGSFGLDAAAPFKFKN-DIFVLLNCS 150


>tr|A5AJ67|A5AJ67_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_023074 PE=4 SV=1
          Length = 340

 Score = 75.5 bits (184), Expect = 3e-12
 Identities = 37/75 (49%), Positives = 45/75 (60%)
 Frame = +1

Query: 415 QPYVNCSNGKLLFYSPTGTYQVQSIDYSNNVMVVIDPQMSTCSSMQLSGAFGLPIGAPFS 594
           QPYV CS  KL   + TG Y + +IDY++ V+ + DP MSTCS  Q S  FGL   APFS
Sbjct: 106 QPYVXCSQEKLTXITHTGXYTITNIDYNSQVLYITDPSMSTCSCAQPSKGFGLDWNAPFS 165

Query: 595 FSSYNKVVLIGCSST 639
           F   N   L+ CS T
Sbjct: 166 FHDGNVFALLDCSIT 180


>tr|Q9SY81|Q9SY81_ARATH F14N23.27 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 333

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +1

Query: 340 CESSCGGITLNXXXXXXXXXXXXXXQPYVNCSNGK--LLFYSPTGTYQVQSIDYSNNVMV 513
           C+ +CG I +                 Y+ C   +  L   + TG+Y + S+DY+   + 
Sbjct: 29  CQKTCGQIPIKYPLGTGSGCGDPRFTRYITCDPDQQTLTLTTHTGSYPITSVDYAKQEIY 88

Query: 514 VIDPQMSTCSSMQLSGAFGLPIGAPFSFSSYNKVVLIGCS 633
           V DP MSTC+  + S  FGL   APFSF       L+ CS
Sbjct: 89  VTDPSMSTCACTRPSHGFGLDWDAPFSFHDDTVFTLLDCS 128


>tr|Q93ZB0|Q93ZB0_ARATH At1g10380/F14N23_32 (Putative
           uncharacterized protein At1g10380) (Putative
           uncharacterized protein) OS=Arabidopsis thaliana
           GN=At1g10380 PE=2 SV=1
          Length = 305

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +1

Query: 340 CESSCGGITLNXXXXXXXXXXXXXXQPYVNCSNGK--LLFYSPTGTYQVQSIDYSNNVMV 513
           C+ +CG I +                 Y+ C   +  L   + TG+Y + S+DY+   + 
Sbjct: 29  CQKTCGQIPIKYPLGTGSGCGDPRFTRYITCDPDQQTLTLTTHTGSYPITSVDYAKQEIY 88

Query: 514 VIDPQMSTCSSMQLSGAFGLPIGAPFSFSSYNKVVLIGCS 633
           V DP MSTC+  + S  FGL   APFSF       L+ CS
Sbjct: 89  VTDPSMSTCACTRPSHGFGLDWDAPFSFHDDTVFTLLDCS 128


>tr|Q9LUT6|Q9LUT6_ARATH Gb|AAD32889.1 OS=Arabidopsis thaliana
           GN=At3g17350 PE=4 SV=1
          Length = 278

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 30/74 (40%), Positives = 39/74 (52%)
 Frame = +1

Query: 331 AWDCESSCGGITLNXXXXXXXXXXXXXXQPYVNCSNGKLLFYSPTGTYQVQSIDYSNNVM 510
           A  C + CG I +N              +   NCS   L F +P+G+Y+VQSIDY    M
Sbjct: 28  ATSCRTLCGNIPINYPFGIDGGCGSPQYRGMFNCSTD-LYFTTPSGSYKVQSIDYEKKTM 86

Query: 511 VVIDPQMSTCSSMQ 552
           V+ DP MSTCS +Q
Sbjct: 87  VIFDPAMSTCSILQ 100


>tr|A9PCR1|A9PCR1_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 280

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 28/71 (39%), Positives = 37/71 (52%)
 Frame = +1

Query: 340 CESSCGGITLNXXXXXXXXXXXXXXQPYVNCSNGKLLFYSPTGTYQVQSIDYSNNVMVVI 519
           C +SCG I +N              +  +NCS   L F +P+G Y+VQ IDY    M + 
Sbjct: 31  CRTSCGSIAINYPFGIDDGCGAPQFRSMLNCSTD-LFFLTPSGGYKVQHIDYDKKTMTIY 89

Query: 520 DPQMSTCSSMQ 552
           DP MSTCS +Q
Sbjct: 90  DPAMSTCSILQ 100


>tr|A7NVX4|A7NVX4_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019701001
           PE=4 SV=1
          Length = 318

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 29/71 (40%), Positives = 37/71 (52%)
 Frame = +1

Query: 340 CESSCGGITLNXXXXXXXXXXXXXXQPYVNCSNGKLLFYSPTGTYQVQSIDYSNNVMVVI 519
           C S CG I +               +  +NCS   L F +P+G Y+VQ+IDY    MVV 
Sbjct: 87  CRSFCGTIPVKYPFGVDEGCGAPQYKGMLNCSTD-LFFLTPSGNYKVQAIDYDKKTMVVY 145

Query: 520 DPQMSTCSSMQ 552
           DP MSTCS +Q
Sbjct: 146 DPAMSTCSILQ 156


>tr|A7R4P0|A7R4P0_VITVI Chromosome undetermined scaffold_748, whole
           genome shotgun sequence (Fragment) OS=Vitis vinifera
           GN=GSVIVT00004605001 PE=4 SV=1
          Length = 284

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
 Frame = +1

Query: 340 CESSCGGITLNXXXXXXXXXXXXXXQPYVNCSNG-----KLLFYSPTGTYQVQSIDYSNN 504
           C  +CG +++               QPY++CS       +LL  + TG Y + SI Y   
Sbjct: 29  CRDTCGSLSVKFPFGTGVGCGSPRFQPYISCSQSSDGGDQLLLRTHTGVYPITSISYEAA 88

Query: 505 VMVVIDPQMSTCSSMQLSGAFGLPIGAPFSFSSYNKVVLIGC 630
              V  P MS C+SMQ S   GL   +PF     +  +L+ C
Sbjct: 89  AFTVTPPLMSNCTSMQPSPNLGLDWASPFQLGP-SAFILLSC 129