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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK954256
Clone id TST39A01NGRL0019_P10
Library
Length 580
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_P10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTTCCTTAAGCTTGAGGGATTGCGTGGTGTTTCGCAACTCGCTGCGCCCTCACCCACAGC
GCTTCTCTCAAACTTCTTCTGGAGTCTTGTTTGAAATACGGTGATGTTTGAAGCTTGATT
CGCTGAAGGTTGCAGTTCAGCTCGATCTGCAGCATAAGGTTTTCGCAGAGAGTCCGTTTG
CAGTTCATCAGGAGCTCGACTTCGTCATCCACTCGATTAGGTTATGCAACTCAAACAACG
GTTTCGCTTCATTCTACACCGATACTCGCAGAGTCCGGTATTTGTAGCTAGATTAGGGTT
TCGCATGAGGCATGACCTCAGACGACAAATTGGGTTAGTTGGCATTTGCCTATGTAGACC
AGGGTTTCTCTAAATTAAGGTGCAGACATTTTCAAGCTGTAAGGTTCTGCAGCGATGGAT
GATGGAGAAATCGACTTCTCAGATCGGCATGTTTTCTCAGATTGCAGCGATCCCTCTATG
GAGAGCTTCTTGGACGAGCTTTTGAAGAACACTCATTCATGCACCCACACCCACACTTGC
AACCCACCTGGGCCCGACAACACACACACTCATACATGTT
■■Homology search results ■■ -
sp_hit_id P14530
Definition sp|P14530|HR2A_TRIFL Zinc metalloproteinase/disintegrin OS=Trimeresurus flavoviridis
Align length 37
Score (bit) 31.2
E-value 3.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954256|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_P10, 5'
         (580 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P14530|HR2A_TRIFL Zinc metalloproteinase/disintegrin OS=Trime...    31   3.9  
sp|P21859|DIST_TRIFL Disintegrin triflavin OS=Trimeresurus flavo...    31   3.9  
sp|P18619|DISF_TRIFL Zinc metalloproteinase/disintegrin OS=Trime...    31   3.9  
sp|O57413|VMTM3_TRIMU Zinc metalloproteinase/disintegrin OS=Trim...    30   6.7  
sp|P17349|DIS1_TRIEL Zinc metalloproteinase/disintegrin OS=Trime...    30   6.7  
sp|Q9QZA1|PHLA1_RAT Pleckstrin homology-like domain family A mem...    30   6.7  
sp|Q1RM03|TCHP_DANRE Trichoplein keratin filament-binding protei...    30   8.7  

>sp|P14530|HR2A_TRIFL Zinc metalloproteinase/disintegrin
           OS=Trimeresurus flavoviridis PE=1 SV=3
          Length = 478

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 342 PTNPICRLRSCLMRNPNLATNTGLCEYRCRMKRNRCL 232
           P+NP C   +C +R P      GLC  +CR K+ R +
Sbjct: 419 PSNPCCDAATCKLR-PGAQCADGLCCDQCRFKKKRTI 454


>sp|P21859|DIST_TRIFL Disintegrin triflavin OS=Trimeresurus
           flavoviridis PE=1 SV=1
          Length = 70

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 342 PTNPICRLRSCLMRNPNLATNTGLCEYRCRMKRNRCL 232
           P+NP C   +C +R P      GLC  +CR K+ R +
Sbjct: 9   PSNPCCDAATCKLR-PGAQCADGLCCDQCRFKKKRTI 44


>sp|P18619|DISF_TRIFL Zinc metalloproteinase/disintegrin
           OS=Trimeresurus flavoviridis PE=1 SV=2
          Length = 483

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 342 PTNPICRLRSCLMRNPNLATNTGLCEYRCRMKRNRCL 232
           P+NP C   +C +R P      GLC  +CR K+ R +
Sbjct: 422 PSNPCCDAATCKLR-PGAQCADGLCCDQCRFKKKRTI 457


>sp|O57413|VMTM3_TRIMU Zinc metalloproteinase/disintegrin
           OS=Trimeresurus mucrosquamatus PE=1 SV=1
          Length = 481

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 342 PTNPICRLRSCLMRNPNLATNTGLCEYRCRMKRNRCL 232
           P NP C   +C +R P      GLC  +CR K+ R +
Sbjct: 419 PENPCCDAATCKLR-PGAQCAEGLCCDQCRFKKKRTI 454


>sp|P17349|DIS1_TRIEL Zinc metalloproteinase/disintegrin
           OS=Trimeresurus elegans PE=1 SV=2
          Length = 481

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 342 PTNPICRLRSCLMRNPNLATNTGLCEYRCRMKRNRCL 232
           P NP C   +C +R P      GLC  +CR K+ R +
Sbjct: 419 PENPCCDAATCKLR-PGAQCADGLCCDQCRFKKKRTI 454


>sp|Q9QZA1|PHLA1_RAT Pleckstrin homology-like domain family A member
           1 OS=Rattus norvegicus GN=Phlda1 PE=2 SV=1
          Length = 263

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 510 HSFMHPHPHLQPTWARQHTHSY 575
           HS+ HPHPHL P     H HS+
Sbjct: 207 HSYPHPHPHLYP-HPHPHAHSH 227


>sp|Q1RM03|TCHP_DANRE Trichoplein keratin filament-binding protein
           OS=Danio rerio GN=tchp PE=2 SV=1
          Length = 499

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -3

Query: 176 RTLCENLMLQIELNCNLQRIKLQTSPYFKQDSRRSLREALWVRAQ 42
           RTL + L+ Q E    L+R   Q S YF++   RS ++A W   Q
Sbjct: 15  RTLEQQLVRQREQEARLRRQWEQHSQYFREQDVRSSKQAQWSSRQ 59
tr_hit_id A9RXD1
Definition tr|A9RXD1|A9RXD1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 65
Score (bit) 64.7
E-value 4.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK954256|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0019_P10, 5'
         (580 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RXD1|A9RXD1_PHYPA Predicted protein (Fragment) OS=Physcomit...    65   4e-09
tr|Q9SLE1|Q9SLE1_ARATH Putative uncharacterized protein At2g1677...    63   1e-08
tr|Q8GTS2|Q8GTS2_ARATH Putative bzip transcription factor atbzip...    63   1e-08
tr|Q0GPG0|Q0GPG0_SOYBN BZIP transcription factor bZIP122 OS=Glyc...    63   1e-08
tr|Q0GPE4|Q0GPE4_SOYBN BZIP transcription factor bZIP121 OS=Glyc...    63   1e-08
tr|A5AP76|A5AP76_VITVI Putative uncharacterized protein (Chromos...    62   3e-08
tr|B7FIL7|B7FIL7_MEDTR Putative uncharacterized protein OS=Medic...    60   9e-08
tr|A7R7T9|A7R7T9_VITVI Chromosome undetermined scaffold_2023, wh...    55   3e-06
tr|A5C0C1|A5C0C1_VITVI Putative uncharacterized protein OS=Vitis...    55   3e-06
tr|Q8VY76|Q8VY76_ARATH Putative uncharacterized protein At4g3504...    53   1e-05
tr|Q8LD81|Q8LD81_ARATH Putative transcription factor OS=Arabidop...    53   1e-05
tr|O49611|O49611_ARATH Putative uncharacterized protein AT4g3504...    53   1e-05
tr|A9PE84|A9PE84_POPTR Putative uncharacterized protein OS=Popul...    52   2e-05
tr|B6T7L6|B6T7L6_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1       41   0.042
tr|B6T6L8|B6T6L8_MAIZE DNA binding protein OS=Zea mays PE=2 SV=1       41   0.042
tr|B4FT66|B4FT66_MAIZE Putative uncharacterized protein OS=Zea m...    41   0.042
tr|B4FM17|B4FM17_MAIZE Putative uncharacterized protein OS=Zea m...    41   0.042
tr|Q8SB38|Q8SB38_ORYSA Putative transcription factor OS=Oryza sa...    41   0.055
tr|Q5Z8P6|Q5Z8P6_ORYSJ Os06g0716800 protein OS=Oryza sativa subs...    41   0.055
tr|A3BFF5|A3BFF5_ORYSJ Putative uncharacterized protein OS=Oryza...    41   0.055
tr|A2YH09|A2YH09_ORYSI Putative uncharacterized protein OS=Oryza...    41   0.055
tr|B4KI76|B4KI76_DROMO GI10322 OS=Drosophila mojavensis GN=GI103...    38   0.36 
tr|B4M8X9|B4M8X9_DROVI GJ18021 OS=Drosophila virilis GN=GJ18021 ...    36   1.8  
tr|Q65X73|Q65X73_ORYSJ Os05g0495200 protein OS=Oryza sativa subs...    33   8.8  
tr|A2Y636|A2Y636_ORYSI Putative uncharacterized protein OS=Oryza...    33   8.8  

>tr|A9RXD1|A9RXD1_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_26362 PE=4 SV=1
          Length = 171

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 10/65 (15%)
 Frame = +1

Query: 415 MDDGEIDFSDRHVFSDCS----------DPSMESFLDELLKNXXXXXXXXXXNPPGPDNT 564
           MDDGE++F+D  VF+ CS            SME+FL+E+L++          NPPGPDNT
Sbjct: 1   MDDGELEFTDHDVFAGCSLCDLPSTPTTMGSMENFLEEVLRSTHACTHTHTCNPPGPDNT 60

Query: 565 HTHTC 579
           HTHTC
Sbjct: 61  HTHTC 65


>tr|Q9SLE1|Q9SLE1_ARATH Putative uncharacterized protein At2g16770
           OS=Arabidopsis thaliana GN=At2g16770 PE=3 SV=1
          Length = 255

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 27/55 (49%), Positives = 37/55 (67%)
 Frame = +1

Query: 415 MDDGEIDFSDRHVFSDCSDPSMESFLDELLKNXXXXXXXXXXNPPGPDNTHTHTC 579
           MDDGE++FS+ ++  +    SM+SF DELL++          NPPGP+NTHTHTC
Sbjct: 1   MDDGELEFSNSNMGGELPSCSMDSFFDELLRDSHACTHTHTCNPPGPENTHTHTC 55


>tr|Q8GTS2|Q8GTS2_ARATH Putative bzip transcription factor atbzip23
           (At2g16770) OS=Arabidopsis thaliana GN=At2g16770 PE=2
           SV=1
          Length = 249

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 27/55 (49%), Positives = 37/55 (67%)
 Frame = +1

Query: 415 MDDGEIDFSDRHVFSDCSDPSMESFLDELLKNXXXXXXXXXXNPPGPDNTHTHTC 579
           MDDGE++FS+ ++  +    SM+SF DELL++          NPPGP+NTHTHTC
Sbjct: 1   MDDGELEFSNSNMGGELPSCSMDSFFDELLRDSHACTHTHTCNPPGPENTHTHTC 55


>tr|Q0GPG0|Q0GPG0_SOYBN BZIP transcription factor bZIP122 OS=Glycine
           max GN=bZIP122 PE=2 SV=1
          Length = 265

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
 Frame = +1

Query: 415 MDDGEIDFSDRHVFSDC------SDPSMESFLDELLKNXXXXXXXXXXNPPGPDNTHTHT 576
           MDDGE+DFS+  VFS        S  SM+SF DELLK+          NPPGPD +HTHT
Sbjct: 1   MDDGELDFSNHEVFSSPNMGELPSSGSMDSFFDELLKDTHACTHTHTCNPPGPDFSHTHT 60

Query: 577 C 579
           C
Sbjct: 61  C 61


>tr|Q0GPE4|Q0GPE4_SOYBN BZIP transcription factor bZIP121 OS=Glycine
           max GN=bZIP121 PE=2 SV=1
          Length = 270

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
 Frame = +1

Query: 415 MDDGEIDFSDRHVFSDC------SDPSMESFLDELLKNXXXXXXXXXXNPPGPDNTHTHT 576
           MDDGE+DFS+  VFS        S  SM+SF DELLK+          NPPGPD +HTHT
Sbjct: 1   MDDGELDFSNHEVFSSPNMGELPSSGSMDSFFDELLKDTHACTHTHTCNPPGPDFSHTHT 60

Query: 577 C 579
           C
Sbjct: 61  C 61


>tr|A5AP76|A5AP76_VITVI Putative uncharacterized protein (Chromosome
           chr3 scaffold_8, whole genome shotgun sequence) OS=Vitis
           vinifera GN=GSVIVT00036120001 PE=3 SV=1
          Length = 264

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 6/61 (9%)
 Frame = +1

Query: 415 MDDGEIDFSDRHVFSDC------SDPSMESFLDELLKNXXXXXXXXXXNPPGPDNTHTHT 576
           MDDGE+DFS++ VFS        S  SM+SF DE+LK+          NPPGPD +HTHT
Sbjct: 1   MDDGELDFSNQDVFSSPNMADLPSSCSMDSFFDEILKDTHACTHTHTCNPPGPDFSHTHT 60

Query: 577 C 579
           C
Sbjct: 61  C 61


>tr|B7FIL7|B7FIL7_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 267

 Score = 60.1 bits (144), Expect = 9e-08
 Identities = 30/61 (49%), Positives = 38/61 (62%), Gaps = 6/61 (9%)
 Frame = +1

Query: 415 MDDGEIDFSDRHVFSDCS------DPSMESFLDELLKNXXXXXXXXXXNPPGPDNTHTHT 576
           M+DGE+DFS++ VFS  +        SM+SF DELLK+          NPPGPD +HTHT
Sbjct: 1   MEDGELDFSNQDVFSSPNMGEFQTSGSMDSFFDELLKDTHACTHTHTCNPPGPDFSHTHT 60

Query: 577 C 579
           C
Sbjct: 61  C 61


>tr|A7R7T9|A7R7T9_VITVI Chromosome undetermined scaffold_2023, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00010221001 PE=4 SV=1
          Length = 260

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
 Frame = +1

Query: 415 MDDGEIDFSDRHVFSDCSDPS-------MESFLDELLKNXXXXXXXXXXNPPGPDNTHTH 573
           MDDGE++ SD  + S+ +  S       ++SFLD+ LKN          NPPGPD  HTH
Sbjct: 1   MDDGEVELSDHVLLSNPNSSSNFQGSTPIDSFLDDFLKNTRTCTHTHTCNPPGPDAAHTH 60

Query: 574 TC 579
           TC
Sbjct: 61  TC 62


>tr|A5C0C1|A5C0C1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_033868 PE=3 SV=1
          Length = 260

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
 Frame = +1

Query: 415 MDDGEIDFSDRHVFSDCSDPS-------MESFLDELLKNXXXXXXXXXXNPPGPDNTHTH 573
           MDDGE++ SD  + S+ +  S       ++SFLD+ LKN          NPPGPD  HTH
Sbjct: 1   MDDGEVELSDHVLLSNPNSSSNFQGSTPIDSFLDDFLKNTRTCTHTHTCNPPGPDAAHTH 60

Query: 574 TC 579
           TC
Sbjct: 61  TC 62


>tr|Q8VY76|Q8VY76_ARATH Putative uncharacterized protein At4g35040
           OS=Arabidopsis thaliana GN=At4g35040 PE=2 SV=1
          Length = 261

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
 Frame = +1

Query: 415 MDDGEIDFSDRHVFSDC-------SDPSMESFLDELLKNXXXXXXXXXX-NPPGPDNTHT 570
           M+DGE+DFS++ VFS         S+ SM+SF D LL +           NP GP+NTHT
Sbjct: 1   MEDGELDFSNQEVFSSSEMGELPPSNCSMDSFFDGLLMDTNAACTHTHTCNPTGPENTHT 60

Query: 571 HTC 579
           HTC
Sbjct: 61  HTC 63