DK954260 |
Clone id |
TST39A01NGRL0019_P14 |
Library |
TST39 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0019_P14. 5' end sequence. |
Accession |
DK954260 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL108Contig1 |
Sequence |
GAGAGTGCATCTTCTTCTGGCGAAGGAGGCGGCAGCATGGTGCACGTCAGTTTCTACCGC AACTATGGAAAGACGTTCAAGAAGCCCCGCCGTCCTTATGAGAAGGAGCGGCTCGATGCA GAACTGAAGCTCGTAGGGGAATATGGACTCCGTAACAAGAGAGAACTGTGGAGAGTTCAA TATGCATTGAGCCGTATCCGCAACAATGCCCGAATGTTGCTTACACTCGATGAGAAGAAC CCACGCAGAATCTTCGAGGGAGAGGCTCTTCTACGTCGCATGTTCAGATATGGTCTTCTA GATGAAAGCCAAAACAAGCTCGATTATGTTTTGGCATTGACAGTTGAGAACTTCTTGGAA CGCCGTCTGCAGACTCTTGTCTTCAAGTCGGGCATGGCCAAATCGATTCATCATGCCCGA GTGCTTATCAAGCAGAGGCATATTAGGGTTGGCAAGCAAGTTGTCAATGTTGCCTCTTTT CTGGGGAGAGTGGATTCACAGAAGCATATTGATTTTGCACTGTCGAGTCCCTTCCGTGGC GGTAGACCTGGCCGTGTGAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LXG1 |
Definition |
sp|Q9LXG1|RS91_ARATH 40S ribosomal protein S9-1 OS=Arabidopsis thaliana |
Align length |
175 |
Score (bit) |
313.0 |
E-value |
4.0e-85 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q60CZ2 |
Definition |
tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=Solanum demissum |
Align length |
175 |
Score (bit) |
324.0 |
E-value |
2.0e-87 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK954260|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0019_P14, 5' (561 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=So... 324 2e-87 tr|A7PMS9|A7PMS9_VITVI Chromosome chr14 scaffold_21, whole genom... 323 3e-87 tr|Q3HRY4|Q3HRY4_SOLTU Putative uncharacterized protein OS=Solan... 323 5e-87 tr|A9NMP0|A9NMP0_PICSI Putative uncharacterized protein OS=Picea... 321 2e-86 tr|B7FMD4|B7FMD4_MEDTR Putative uncharacterized protein OS=Medic... 321 2e-86 tr|A9PJU4|A9PJU4_POPJC Putative uncharacterized protein OS=Popul... 320 3e-86 tr|A9PAL5|A9PAL5_POPTR Putative uncharacterized protein OS=Popul... 320 3e-86 tr|A7QEG7|A7QEG7_VITVI Chromosome chr1 scaffold_84, whole genome... 320 4e-86 tr|A9PJ59|A9PJ59_POPJC Putative uncharacterized protein OS=Popul... 319 6e-86 tr|A9P9U8|A9P9U8_POPTR Putative uncharacterized protein OS=Popul... 319 6e-86 tr|B8LND2|B8LND2_PICSI Putative uncharacterized protein OS=Picea... 319 7e-86 tr|A5HSG2|A5HSG2_ARTAN Putative 40S ribosomal protein S9 OS=Arte... 319 7e-86 tr|B3TM27|B3TM27_ELAGV Ribosomal protein OS=Elaeis guineensis va... 318 1e-85 tr|Q6H8J2|Q6H8J2_CATRO 40S ribosomal protein S9 OS=Catharanthus ... 318 2e-85 tr|A9SLM0|A9SLM0_PHYPA Predicted protein OS=Physcomitrella paten... 318 2e-85 tr|A9RK26|A9RK26_PHYPA Predicted protein OS=Physcomitrella paten... 318 2e-85 tr|A9TG44|A9TG44_PHYPA Predicted protein OS=Physcomitrella paten... 317 3e-85 tr|A9RKT7|A9RKT7_PHYPA Predicted protein OS=Physcomitrella paten... 316 5e-85 tr|A9PA82|A9PA82_POPTR Putative uncharacterized protein OS=Popul... 315 8e-85 tr|B3TM34|B3TM34_ELAGV 40S ribosomal protein S9 OS=Elaeis guinee... 313 4e-84 tr|A9S7K2|A9S7K2_PHYPA Predicted protein OS=Physcomitrella paten... 313 4e-84 tr|Q2R1J8|Q2R1J8_ORYSJ 40S ribosomal protein S9, putative, expre... 310 3e-83 tr|A2ZFU3|A2ZFU3_ORYSI Putative uncharacterized protein OS=Oryza... 310 3e-83 tr|Q676Y9|Q676Y9_HYAOR 40S ribosomal protein S9 OS=Hyacinthus or... 310 5e-83 tr|B6SZS2|B6SZS2_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 307 3e-82 tr|B6T7B2|B6T7B2_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 305 1e-81 tr|B6T8L0|B6T8L0_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 303 4e-81 tr|B6TH64|B6TH64_MAIZE 40S ribosomal protein S9 OS=Zea mays PE=2... 301 1e-80 tr|Q2R1J7|Q2R1J7_ORYSJ 40S ribosomal protein S9, putative, expre... 300 4e-80 tr|A8JGF8|A8JGF8_CHLRE Ribosomal protein S9, component of cytoso... 298 1e-79
>tr|Q60CZ2|Q60CZ2_SOLDE 40S ribosomal protein S9 , putative OS=Solanum demissum GN=SDM1_52t00012 PE=3 SV=1 Length = 197
Score = 324 bits (830), Expect = 2e-87 Identities = 163/175 (93%), Positives = 170/175 (97%) Frame = +1
Query: 37 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 216 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARM 60
Query: 217 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 396 LLTLDEK+PRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKDPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKTGM 120
Query: 397 AKSIHHARVLIKQRHIRVGKQVVNVASFLGRVDSQKHIDFALSSPFRGGRPGRVK 561 AKSIHHARVLI+QRHIRVG+QVVNVASF+ RVDSQKHIDF+L+SPF GGRPGRVK Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNVASFMVRVDSQKHIDFSLTSPFGGGRPGRVK 175
>tr|A7PMS9|A7PMS9_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence (Chromosome chr17 scaffold_101, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00000124001 PE=3 SV=1 Length = 197
Score = 323 bits (829), Expect = 3e-87 Identities = 162/175 (92%), Positives = 168/175 (96%) Frame = +1
Query: 37 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 216 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQY LSRIRNNARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNNARM 60
Query: 217 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 396 LLTLDEKNPRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 397 AKSIHHARVLIKQRHIRVGKQVVNVASFLGRVDSQKHIDFALSSPFRGGRPGRVK 561 AKSIHHARVLI+QRHIRVG+QVVN+ SFL R+DSQKHIDF+L+SP GGRPGRVK Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFLVRMDSQKHIDFSLTSPLGGGRPGRVK 175
>tr|Q3HRY4|Q3HRY4_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 197
Score = 323 bits (827), Expect = 5e-87 Identities = 162/175 (92%), Positives = 170/175 (97%) Frame = +1
Query: 37 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 216 MVHV+FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVNFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNAARM 60
Query: 217 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 396 LLTLDEK+PRRIFEGEALLRRM RYGLLDESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKDPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKTGM 120
Query: 397 AKSIHHARVLIKQRHIRVGKQVVNVASFLGRVDSQKHIDFALSSPFRGGRPGRVK 561 AKSIHHARVLI+QRHIRVG+QVVNVASF+ RVDSQKHIDF+L+SPF GGRPGRVK Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNVASFMVRVDSQKHIDFSLTSPFGGGRPGRVK 175
>tr|A9NMP0|A9NMP0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 197
Score = 321 bits (823), Expect = 2e-86 Identities = 160/175 (91%), Positives = 168/175 (96%) Frame = +1
Query: 37 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 216 MVHV+FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQY LSRIRN ARM Sbjct: 1 MVHVNFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYTLSRIRNAARM 60
Query: 217 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 396 LLTLDEKNPRRIFEGEALLRRM RYGLLDESQ+KLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQSKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 397 AKSIHHARVLIKQRHIRVGKQVVNVASFLGRVDSQKHIDFALSSPFRGGRPGRVK 561 AKSIHHARVLI+QRHIRVG+QVVN+ SF+ RVDSQKHIDF+L+SP GGRPGRVK Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPLGGGRPGRVK 175
>tr|B7FMD4|B7FMD4_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 197
Score = 321 bits (822), Expect = 2e-86 Identities = 159/175 (90%), Positives = 169/175 (96%) Frame = +1
Query: 37 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 216 MVHV+FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRNNAR Sbjct: 1 MVHVAFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNART 60
Query: 217 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 396 LLTLDEKNPRRIFEGEALLRRMF++GLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMFKHGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 397 AKSIHHARVLIKQRHIRVGKQVVNVASFLGRVDSQKHIDFALSSPFRGGRPGRVK 561 AKSIHHARVLI+QRHIRVG+QVVN+ SF+ RVDSQKHIDF+L+SPF GG PGRVK Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGLPGRVK 175
>tr|A9PJU4|A9PJU4_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 197
Score = 320 bits (821), Expect = 3e-86 Identities = 161/175 (92%), Positives = 168/175 (96%) Frame = +1
Query: 37 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 216 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRAKRELWRVQYALSRIRNAARM 60
Query: 217 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 396 LLTLDEKN RRIFEGEALLRRM RYGLL+ESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKNQRRIFEGEALLRRMNRYGLLEESQNKLDYVLALTVENFLERRLQTLVFKAGM 120
Query: 397 AKSIHHARVLIKQRHIRVGKQVVNVASFLGRVDSQKHIDFALSSPFRGGRPGRVK 561 AKSIHHARVLIKQRHIRVG+QVVN+ SF+ RVDSQKHIDF+L+SPF GGRPGRVK Sbjct: 121 AKSIHHARVLIKQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVK 175
>tr|A9PAL5|A9PAL5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 197
Score = 320 bits (821), Expect = 3e-86 Identities = 161/175 (92%), Positives = 168/175 (96%) Frame = +1
Query: 37 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 216 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRAKRELWRVQYALSRIRNAARM 60
Query: 217 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 396 LLTLDEKN RRIFEGEALLRRM RYGLL+ESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKNQRRIFEGEALLRRMNRYGLLEESQNKLDYVLALTVENFLERRLQTLVFKAGM 120
Query: 397 AKSIHHARVLIKQRHIRVGKQVVNVASFLGRVDSQKHIDFALSSPFRGGRPGRVK 561 AKSIHHARVLIKQRHIRVG+QVVN+ SF+ RVDSQKHIDF+L+SPF GGRPGRVK Sbjct: 121 AKSIHHARVLIKQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVK 175
>tr|A7QEG7|A7QEG7_VITVI Chromosome chr1 scaffold_84, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037003001 PE=3 SV=1 Length = 197
Score = 320 bits (819), Expect = 4e-86 Identities = 160/175 (91%), Positives = 167/175 (95%) Frame = +1
Query: 37 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 216 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQY LSRIRNNARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYVLSRIRNNARM 60
Query: 217 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 396 LLTLDEKNPRRIFEGEALLRRM +YGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM Sbjct: 61 LLTLDEKNPRRIFEGEALLRRMNKYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
Query: 397 AKSIHHARVLIKQRHIRVGKQVVNVASFLGRVDSQKHIDFALSSPFRGGRPGRVK 561 AKSIHHARVLI+QRHIRVG+QVVN+ SF+ RV+SQKHIDFA +SP GGRPGRVK Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVESQKHIDFANTSPLGGGRPGRVK 175
>tr|A9PJ59|A9PJ59_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 197
Score = 319 bits (818), Expect = 6e-86 Identities = 160/175 (91%), Positives = 168/175 (96%) Frame = +1
Query: 37 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 216 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRAKRELWRVQYALSRIRNAARM 60
Query: 217 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 396 LLTLDEKN RRIFEGEALLRRM RYGLL+ESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKNSRRIFEGEALLRRMNRYGLLEESQNKLDYVLALTVENFLERRLQTLVFKAGM 120
Query: 397 AKSIHHARVLIKQRHIRVGKQVVNVASFLGRVDSQKHIDFALSSPFRGGRPGRVK 561 AKSIHHARVLIKQ+HIRVG+QVVN+ SF+ RVDSQKHIDF+L+SPF GGRPGRVK Sbjct: 121 AKSIHHARVLIKQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVK 175
>tr|A9P9U8|A9P9U8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 197
Score = 319 bits (818), Expect = 6e-86 Identities = 160/175 (91%), Positives = 168/175 (96%) Frame = +1
Query: 37 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRNKRELWRVQYALSRIRNNARM 216 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLR KRELWRVQYALSRIRN ARM Sbjct: 1 MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRAKRELWRVQYALSRIRNAARM 60
Query: 217 LLTLDEKNPRRIFEGEALLRRMFRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 396 LLTLDEKN RRIFEGEALLRRM RYGLL+ESQNKLDYVLALTVENFLERRLQTLVFK+GM Sbjct: 61 LLTLDEKNSRRIFEGEALLRRMNRYGLLEESQNKLDYVLALTVENFLERRLQTLVFKAGM 120
Query: 397 AKSIHHARVLIKQRHIRVGKQVVNVASFLGRVDSQKHIDFALSSPFRGGRPGRVK 561 AKSIHHARVLIKQ+HIRVG+QVVN+ SF+ RVDSQKHIDF+L+SPF GGRPGRVK Sbjct: 121 AKSIHHARVLIKQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVK 175
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